ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457525 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◣ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CRY2
PER1
CRY1
CIART
DBP
AGAP11
ADIRF
PER2
CSDE1
NR6A1
TRAPPC6A
BLOC1S3
TEF
CLUAP1
C16orf90
DAZAP2
INAFM1
S100A13
CHTOP
DDX5
ERCC6L2
PFDN4
MORF4L1
RORC
BCAS3
DDX42
CCDC47
SNRPE
EPC1
NPTN
NR1D1
NOL8
CENPP
PIP4P1
KMT2E
LRATD2
SRSF1
XPOT
TRIM37
SRSF5
HMGB2
SDR39U1
TOB1
ARRDC3
GSK3B
PLEKHF2
KAT5
BCAR1
EIF3B
MAPK1IP1L
TRIQK
OSGIN1
PLD6
CCNL1
THOC7
ATXN7
EIF5A2
NAA50
ATP6V1A
PPM1D
PRORP
PPP2R3C
BRIP1
COQ10B
SEPTIN2
HDLBP
BCLAF1
RMI1
HNRNPK
APPBP2
TPD52L2
ABHD16B
HNRNPA2B1
CBX3
NCOA3
LNX1
DHPS
USP32
TCF25
FAM76A
ARIH1
EIF4B
YPEL5
ALG13
IGSF8
PAF1
TXNIP
PTBP1
NFX1
SRCAP
LOC730183
RFX3
FNBP4
PRKAR1A
EMP3
CCDC114
HOOK2
SRP9
SRP54
MMADHC
TM9SF1
EIF1
PRPF3
SLC25A25
NAIF1
RCCD1
MARCHF9
CDK4
FRG2C
RNF43
ZNF263
TUBD1
RPS6KB1
TMEM187
HCFC1
ECH1
TMEM141
CCDC183
TUBA1B
CLN6
YEATS4
MED13
ZMYND8
MAP1LC3B
FBXO31
EED
MCM7
AP4M1
ITGB1
LRRC56
HRAS
SLC20A1
NFYC
NR1H2
SLC3A2
BRPF1
KAT7
MAPK6
UNK
H3-3B
NRAS
SCAF1
RRAS
SREK1
RBM3
PPP2R5C
RALGDS
HNRNPF
HEXIM2
CEBPB
USP48
ZNF687
TRA2A
NBN
HNRNPC
CHMP2B
PCNT
C21orf58
SLC35C2
DOCK6
PTEN
KLLN
DDX23
PPP1R3D
FAM217B
PCIF1
EIF4A2
ZCWPW1
MEPCE
CLK1
EIF5
GET4
LRCH4
FBXO24
ZFP91
LPXN
HIRIP3
PIGO
GART
UBQLN1
UNC13D
TUBA1C
TMCC1
ILF3
ZNF335
FBXO46
SERINC3
C2CD4D
CAP1
PRKDC
MCM4
ARRDC4
RFESD
PTP4A1
OGFOD2
ARL6IP4
ANAPC7
TRA2B
RIPK2
SKA2
PRR11
TRMT112
PRDX5
SULT1A4
SULT1A3
BOLA2
SLX1B
SLX1A
BOLA2B
GABPB2
AHI1
KIAA0895
ANLN
PLEKHG5
BCAS4
SRSF4
CD55
COX19
ELOB
PDCD6IP
SULF2
SLC43A2
ZNF24
ENSA
MED26
YWHAZ
SLC25A24
SNX5
MGME1
FBXW4
TSPAN31
NPC1
AGAP2
NCAPD2
MRPL51
ZNF217
RABGGTA
EGR1
PPIL3
NIF3L1
MOCS3
DPM1
MADD
HPS5
GTF2H1
GPBP1
TMEM251
MOAP1
PHKG2
USP9X
DDX6
PTCD3
POLR1A
PPP4R3B
ZFP1
RNF139
PAIP2
SERTAD3
SERF2
TNFRSF12A
THOC6
HCFC1R1
CLDN6
CYTH2
SF3B4
COPS3
BRD2
CALM2
PHF12
ZC3H11A
ZBED6
SESN1
DDIT4
CEP57L1
SARAF
CLTC
WDR6
PPP1R15A
PLEKHA4
KIFC1
DNAJB1
UTP18
MBTD1
NPR3
OSGIN2
MDM2
NUDCD3
RSRP1
SETD1A
SYT1
ISOC2
UBE2M
CHMP2A
SMC4
IFT80
C1orf54
APH1A
ZBTB7B
CBLL1
CD2BP2
PPP1R3C
DDX59
TBX2
HNRNPH1
MYL6
MZF1
FAM214A
PLK4
RPL10
BOLA2-SMG1P6
PPIA
UBE2T
P2RX2
LRCOL1
STAG2
FBXL18
SYNCRIP
RNF31
PSME2
PPM1A
DDX43
GMNN
ANKRD12
SPATA2
KIF22
WDR81
C6orf62
ST20-MTHFS
DUSP1
PPP1R15B
TMED10
KMT5C
VAPB
NOP58
SRSF6
RCE1
RNH1
ZZEF1
CYB5D2
ZNF438
TSC22D1
PNRC1
TAF7
ARF6
TOR1AIP2
TOR1AIP1
POLR1D
LNX2
GNAS
UBAP2L
C1orf43
TPT1
TMEM116
ERP29
ADNP2
CREBZF
UCP2
MED15
STX4
H4C15
H4C14
PNISR
WBP1
INO80B
SYVN1
PRC1
SRRT
CSE1L
KEAP1
NPDC1
CD164
CHD1
KRT80
ZCWPW2
AZI2
RNF13
EIF2B5
PRKCI
TUFT1
ZC3H6
MICALL2
HARBI1
ATG13
TADA3
ARPC4-TTLL3
ARPC4
TMEM69
GPBP1L1
CIC
TIMM22
UBA1
BUB3
CACYBP
DDX19B
PPP2CA
RNF6
SPOP
POLD3
HBP1
RIN2
FLCN
TFAP2C
KRT18
AP1G1
GABARAPL2
TANK
PRMT2
PPIG
CUL5
CDIPT
TREX1
PNPLA7
MRPL41
CHMP3
GABPB1
ZBTB4
SLC35G6
POLR2A
MTHFD2
LLGL2
ZBTB8OS
RBBP4
H3C15
H3C14
H2AC19
H2AC18
TRIM52
NSUN3
DHFR2
ZNF274
TMEM18
IRF2BPL
NTMT1
DHX40
H2BC21
H2AC21
H2AC20
STAM2
ZNF384
GOLGA5
FNIP1
UBALD1
FAM117B
CHFR
TRIM33
TMEM138
CYB561A3
LUC7L2
FMC1-LUC7L2
FMC1
ST6GALNAC2
TFAP4
C17orf58
PTOV1
GSPT1
UVRAG
UBC
JUND
DPP3
PCBP1
LSM5
AVL9
TAX1BP1
PSENEN
LIN37
THNSL1
LYRM1
DCUN1D3
DARS1
IRF2BP2
EMC2
NME1-NME2
NME1
PIGW
MYO19
TMEM258
NUP62
IL4I1
FEN1
ATF5
WDR74
RAB11A
PMS2
AIMP2
YTHDF3
MIB2
ELP5
CTDNEP1
JADE2
MARS1
ARHGAP9
RBM5
TRPV4
LATS1
PRDX6
EMP2
ACYP2
AMOTL2
FANCC
LPP
TAX1BP3
EMC6
CRCP
HSF1
BOP1
ZBTB21
GTF2A1
PPP1R13L
POLR1G
PPP4R3A
GABPA
ATP5PF
SENP2
PRPF8
PHF19
CENPN
XRN1
POMT2
GSTZ1
DUS3L
DMTF1
SNRPA
C19orf54
TSPYL1
DSE
MAT2A
UPF2
MAP2K7
BAZ1A
NKIRAS1
RPL15
ICA1
CSTF1
AURKA
CEP63
ANAPC13
TYW1
SBDS
RACGAP1
H3C6
CAPNS1
CTDSP2
KLF10
NUBP1
H2BC4
H2AC6
CUL4B
PIK3IP1
PSMC5
FTSJ3
ACTB
RNASEK
C17orf49
SPATA17
GPATCH2
PMEPA1
HNRNPDL
ENOPH1
SLC2A10
DAGLB
ARPC3
DNAJB12
SWI5
MRPS18C
HELQ
GOLGA2
EAPP
DUX4
BCL6
POLR2J3
ETF1
RNF19A
TMBIM6
BCAM
RBBP5
PARD6B
HSPA8
PTGES3
BCL2L1
PURB
CSNK1A1
GID8
DIDO1
ATXN7L3B
SLC33A1
EEF1A1
ALDOA
HIPK3
DYNC2I2
H2BC12
H2AC12
GUK1
MBTPS1
CELSR3
RBM8A
ERBIN
PC
PSMD6
DNPEP
RLF
SETDB1
RPRD2
TCERG1
GBE1
CNOT2
SLC37A4
SLC25A36
SLC35A5
ATG3
FIBP
CCDC85B
ANP32B
CMTM4
ST7L
MATR3
CAPZA1
TIAL1
PHC3
GDF15
CCDC24
FTH1
ADK
MPZL3
TMED1
UQCRC2
SHC1
CKS1B
NOL11
WRAP53
TP53
BCL7B
HIF1A
SDHAF2
RAB5A
EFHB
CPSF7
WDR13
TNNI3
TPD52L1
ARMC8
U2AF2
ARCN1
ATG101
PTPN1
SLC25A6
SHOC2
BBIP1
IFRD2
DDB2
WTAP
SOD2
CHURC1-FNTB
CHURC1
SMG9
ZAR1L
BRCA2
RFWD3
NUP160
NDE1
MARF1
MTCH2
TIMM9
KIAA0586
RPN2
MROH8
FBXO33
MSH5
CLIC1
CIPC
SEPTIN9
ZNF791
ZNF490
NR4A1
RAD9A
SDSL
FAF2
TINF2
HES4
KPNA2
PGP
BRICD5
HIPK1
SIRT4
LSM12
G6PC3
TRMO
ERGIC2
BRMS1L
TXN2
SCYL3
SUPT16H
SLC39A6
POP7
IFRD1
MYL12A
FBXO5
FBXL19
ARFGEF2
DIAPH1
ZWILCH
RPL4
LAMA5
AZIN1
ZNF706
KDM6B
PNO1
TTC3
SETD3
PNRC2
PIGP
CCNK
G3BP1
SNW1
RAB3GAP1
SMIM13
YY1AP1
DAP3
RBM22
RPSA
PSMG3
CD58
RITA1
DDX54
WBP11
C12orf60
COPB2
RBBP6
TET3
SAE1
MCM9
OSGEP
APEX1
DDX3X
DACT3
NFE2L2
H2BC11
H2AC11
FERMT2
UBE2B
CDKL3
CBWD5
CBWD3
ZBTB25
ZBTB1
CAMSAP2
SHMT2
PMF1-BGLAP
PMF1
MINK1
HOXC9
HDAC4
ATF7-NPFF
ATF7
ZNF627
MLF2
DOP1B
RGS9BP
ANKRD27
ELK4
TMEM64
SLC2A4RG
LIME1
FAM53C
CDC25C
WDR97
MAF1
STK40
CACNG4
STRADA
ZZZ3
BANP
SRSF2
MFSD11
LRIF1
BZW1
HEXIM1
METTL2A
IQCE
CLK4
BRAT1
MRPL35
IMMT
PPP1R37
STAT3
BNIP1
NDUFAF5
ESF1
PLA2G6
ZMYM5
IP6K2
CENPA
ERAP1
SLC25A40
DBF4
CRADD
SRSF7
PSMC3
RND3
ANKRD13D
TARDBP
SLC35B1
MPC2
MON2
DCAF6
CASC3
GAS2L3
PPP6C
IQANK1
FAM83H
CNNM2
SPG21
ING1
USP36
RPS11
MARVELD2
DZIP3
CIP2A
SUCO
MLH1
EPM2AIP1
TAGLN2
SNRNP200
PSMD5
MYH14
EPM2A
TSTD2
NCBP1
TM9SF4
TASOR
DYRK1B
TBL1XR1
SETD5
SEC61B
ALG2
PPFIA4
FASTKD2
KLF1
GCDH
ZNF219
TMEM253
NAB2
LDLR
SLC39A7
RXRB
HSD17B8
CDK19
AMD1
FBRS
YARS1
S100PBP
RPS19
RAP2A
PDXDC1
RAN
SSU72
PEDS1-UBE2V1
PEDS1
PDE8A
DPY19L3
S100A16
PRRC2C
LEKR1
SKIL
METTL8
GPSM3
DCAF17
ATP6V1G1
TRAPPC6B
PNN
MED7
ISG20
SLC25A5
JUN
IER5L
FUT8
ZNF672
BTF3
KHDRBS1
TENT5B
FUBP1
DNAJB4
ERBB3
BRWD1
PDAP1
BUD31
PSMC1
SNRNP35
PPP2R1A
THAP5
DNAJB9
SEC62
VAMP2
EXOSC5
BCKDHA
TYW1B
NR2C2
ZNRF2
ESRP2
TRIP11
CNOT1
MAL2
FAM86B1
SARNP
ORMDL2
ZNF700
RAB8A
PCF11
ADGRG6
HSF2
PRR15L
GPRC5A
RFXANK
BORCS8
TMEM30B
SCAMP1
MYO6
STAMBP
DLG3
DHX15
YTHDC1
H4C1
H3C1
H1-1
FARSB
CLDN7
CDK12
GTPBP6
VMP1
PTRH2
USP43
CETN3
SMIM14
PPP1R12A
SPTSSB
ESCO1
TBC1D9
GNA13
WDR4
FANCD2
NAV1
RGL2
GLS
NCBP2AS2
NCBP2
NARF
STX10
SP4
LOC730098
IER2
CCL27
GMFB
RPS21
VEGFA
RAPGEF6
SRRM1
DSN1
STXBP4
COX11
RAB1A
CYB561
UBE2D3
TMEM183A
HECTD2
ATF4
CLN3
APOBR
SLC25A39
SETD1B
LRP10
FOS
COQ7
PHIP
HNRNPA3
FOSB
DCAKD
BSDC1
RHOF
C3orf14
LDAH
TSEN34
MBOAT7
GTF3C4
DDX31
EIF3L
CCDC174
ANKRD54
ARMC5
SMARCB1
SPIN1
PPA2
MIS12
H2BC15
H2AC15
DNAJA3
DERL2
CAAP1
ILVBL
KRIT1
ANKIB1
DIP2A