ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457295 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◣ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

MARCHF9
CDK4
GET4
PLD6
KAT5
CRY2
AGAP11
ADIRF
PER2
CRY1
CLUAP1
C16orf90
PER1
NKIRAS1
NR1D2
CIART
DBP
RALGDS
PIP4P1
NPTN
BCAR1
RORC
LAMP1
RAD9A
TRAPPC6A
BLOC1S3
CLCN7
COMMD8
SLC35A5
ATG3
ANKRD12
CDK12
HOXC13
LRRC56
HRAS
SNRPE
TMEM116
ERP29
NR6A1
KHDRBS1
DENR
MAPK6
TEF
GTF3A
PTBP1
DOCK6
RNF43
ZNF292
ELAVL3
YPEL5
VPS11
NOL8
CENPP
AP5Z1
HPS5
GTF2H1
ARFGEF2
NR1D1
PIK3IP1
EIF5A2
MTHFR
CLCN6
TRPV4
WASHC2A
PER3
OSGEP
APEX1
PLEKHF2
STX4
UVRAG
IGSF8
FAM76A
UBE2B
CDKL3
HOOK2
PSMD5
ERCC6L2
RPUSD4
FAM118B
EMC2
VPS26A
LNX1
CLN6
RNASEK
C17orf49
FRG2C
SPG21
SLC35B2
RHOF
MICALL2
SLC33A1
MAP2K7
TRIM37
TRAPPC2L
GALNS
AP1S1
OSGIN1
AVPI1
WASHC2C
SNRPA
C19orf54
IFRD2
TXNIP
IP6K1
ZNF331
HES4
PFDN4
BCAS3
MAP4K1
EIF3K
TMEM185B
ATP6V1H
YBX2
P2RX2
LRCOL1
ARRDC4
PTEN
KLLN
TNNI3
SPNS1
GYG1
RPS11
PPP1R3C
SERF2
WDR62
THAP8
PHKG2
PRDX6
TMEM18
B3GNTL1
PLEKHG5
UBAP2L
C1orf43
ISOC2
NOP14
GRK4
DUX4
SLC20A1
ILF3
TUBGCP5
FNIP1
PNPLA7
MRPL41
SPPL3
MRPS23
TRIM59
HIF1A
KLF1
GCDH
ZNF438
UBE2Q1
SLC25A13
KDM4C
TBCEL-TECTA
TBCEL
BCAM
ADNP2
SPATA25
NEURL2
CTSA
NPR3
SLC25A26
AMDHD2
GMFB
HERC3
COMMD9
ZNRF2
STAT6
FIBP
CCDC85B
USP32
FAM117B
PMS2
AIMP2
CLN3
APOBR
RRAGB
RAB17
PC
CREBRF
RMND1
ARMT1
DPP3
TIMM22
PDE12
BAX
TRMO
MAP1LC3B
FBXO31
SLC25A36
EPM2A
CSTF1
AURKA
IGSF21
SLC25A11
RNF167
MTHFD1L
NUDCD3
CCDC24
SENP8
MYO9A
NME1-NME2
NME1
LCN12
C8G
SUMF1
MYDGF
FZD1
CFAP251
GTF2A1
LYRM9
IREB2
NAPRT
MROH6
LRFN4
CEP63
ANAPC13
KDM6B
TBC1D13
CAMKK1
ADGRB1
ZZZ3
MED1
FRG2
LSM12
G6PC3
ZNF84
GTPBP6
THAP5
DNAJB9
KLF11
HEXA
THRAP3
GZF1
MACROD2
CRYAA2
CRYAA
CTTN
ATXN2
PUM2
DACT3
DPH2
B4GALT2
ATP6V0B
EPB41L4B
PHF23
DVL2
ZNHIT1
PLOD3
LAMC1
TRIM8
AEN
GABARAPL2
HES1
DDX5
FAM214A
KLHL12
RFESD
SLC25A10
CEBPB
ZBTB37
MAL2
PEX14
DFFA
UTP18
MBTD1
MTCH2
EIF4G1
CLN8
MIOX
ADM2
VPS33A
MAX
ZNF263
PPP1R3D
FAM217B
PPFIA4
TBC1D17
AKT1S1
WDR89
MVB12A
ISG20
ANKFY1
RNF223
SPTBN4
BLVRB
ADGRE5
COX14
OSBPL1A
SLC49A4
HSPBAP1
ZNF706
ATOH8
SYNGAP1
CUTA
MEA1
KLHDC3
ARF3
HNRNPH2
GCLC
MTDH
CCNB1
GREB1
POLI
ASPH
INO80
HBP1
DHODH
ZC3H4
USP36
XRN2
SRP54
RIMBP2
GBE1
DLX4
SGO1
SPAAR
SLBP
CCDC86
SLC2A4RG
LIME1
PSME3
RRAGC
POR
STRIP1
GGA2
STMN1
TJP2
GSTP1
STYXL1
YARS1
S100PBP
ESYT3
MAPK15
C1orf174
C2CD4D
SCAF11
ZHX2
INSIG2
SLC26A8
MAPK14
FOXN4
MTRNR2L1
IGFL1
G3BP1
STXBP4
COX11
NDUFS6
MRPL36
HUWE1
SLC35A4
APBB3
ALG13
RAD50
TXNRD1
UCKL1
RPEL1
TBC1D15
NFX1
CNNM2
FLCN
EIF3B
H2BC12
H2AC12
DGAT2
CYB561
CPNE7
CCDC116
TMEM88
NAA38
CYB5D1
LTV1
EIF4A1
PABPC1
SLC12A4
PRRG2
NOSIP
PNPO
SMARCD2
THNSL1
COPS7A
CBFA2T2
PPAT
PAICS
PDP2
TIPARP
C15orf39
HSF2
OR2B11
NTMT1
ATIC
SOCS5
PACSIN3
ERGIC2
PIK3R3
CLTC
TRIB1
RNF13
ABCA3
NAT10
SLC25A39
CD164
CCDC186
TDRD1
STX6
UBR5
DDTL
DDT
TMEM53
ARMH1
TOP3A
SMCR8
JUNB
CCDC6
TBC1D30
GNS
RBBP6
TATDN2
OPRL1
LKAAEAR1
ZNF219
TMEM253
STX16
PRPF3
RRP9
PARP3
PPM1H
CHFR
ERCC1
NAMPT
DHX40
MFSD4B
GALNT18
RPSA
PDPR
EXOSC5
BCKDHA
CCDC107
ORC4
MBD5
UPF3A
FAM214B
DCBLD1
KPNA3
NSUN3
DHFR2
DEF6
TIPIN
CIB3
SYNRG
PPP4R3B
PLEKHG2
CC2D1B
TRIP6
ADCK1
RC3H2
NCOA3
CENPN
SLC25A19
ZNF57
TENT5B
THAP6
CENPA
ALOXE3
RTN4RL1
DPH1
PDK2
KPNA2
HNRNPA1
CBX5
HPS1
TARDBP
APPBP2
LFNG
UBN1
GLYR1
ALCAM
SLC39A6
GOLIM4
CAD
ATRAID
ARL4A
CD37
TANC2
NAPA
DEFB116
UCP2
BCAS1
TMEM184A
IQSEC1
SLC12A6
NUTM1
NOP10
TPD52L2
ABHD16B
ATG101
TOR3A
ILVBL
CSRNP1
NFKBIL1
ATP6V1G2
WDR77
ATP5PB
PARD6B
HDAC4
MLH1
EPM2AIP1
YIF1A
TMEM151A
C5orf51
SPATA2L
AIG1
SETD6
CHKA
ATF7-NPFF
ATF7
PRKAR1A
MARCHF8
PSMD6
DDX3X
MRPS18B
LIN54
TBL1X
KCTD9
CDCA2
POLR1D
LNX2
ZFPM1
SCAP
PPM1D
TMEM79
SMG5
LAMTOR4
ACAD9
SBNO2
PTCD3
POLR1A
L3HYPDH
JKAMP
SPAG9
NUP188
DOLK
YOD1
PFKFB2
ZNF286A
TNPO2
SLC26A9
CMTR2
FBXO5
USP17L22
USP17L20
SLC35E2A
SNAI1
MAGT1
COX7B
MICOS10-NBL1
MICOS10
PNO1
ATP5MC1
WDSUB1
SAC3D1
BCAS4
MCCC1
BTBD10
PLD3
C19orf47
ADK
VMP1
PTRH2
TMEM248
MXD3
HMGN2
MYL12A
LAMTOR1
ZFP36
COA7
RCCD1
MICU1
PRKAG2
PUF60
MRPL40
HIRA
ZNF778
RNF26
FCMR
LONP1
CATSPERD
GIPC1
HNRNPD
DOK7
SUPV3L1
NCOA4
PLEC
TET3
UTP20
SIRT1
MRPL45
SF1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MTMR14
TIMM44
SOX12
ACAP2
FAM200B
SKA3
MRPL57
PSMG1
PFAS
METTL17
FBXO33
ATL2
MEF2D
ATAD2
DYRK3
WIPI1
SLC45A4
TSTD2
NCBP1
WASHC4
GDI2
NMRAL1
HMOX2
FAF1
AMMECR1L
MAD1L1
PDIA4
COLEC11
NRDC
ADGRE2
SNX8
TSPYL6
SAE1
SLC39A4
CPSF1
SETD4
RBBP8NL
STXBP1
BNIP5
SPTSSB
SH3GL3
PRORP
PPP2R3C
NRAS
ZFP62
TCFL5
PTDSS1
MTERF3
TTC32
NPM1
LPIN3
SRSF10
HSPH1
VPS8
ERICH6
ZBTB10
CDC5L
ATP6V1C1
BHLHB9
CCNA2
LARP1
TCERG1
GPHN
C6orf62
PPIA
FOS
SPATC1L
NADK
RGS22
KHSRP
PDXDC1
NOCT
TMEM94
IRF2BP1
GSKIP
ATG2B
CYC1
HPSE
DHDDS
DDX42
CCDC47
CDIPT
GLS
RAD23A
DOHH
DNAJB5
MADD
ZBTB7B
FNTB
LRP6
MDN1
PSMG4
LUC7L2
BCL6
PKNOX1
ZNF408
ARHGAP1
UGDH
WTAP
SOD2
CALM2
PGP
BRICD5
XKR9
LACTB2
FUBP1
DNAJB4
CAMLG
GPSM2
METTL1
EEF1AKMT3
CYP27B1
DUSP7
TUBD1
RPS6KB1
RNF34
RAB40B
EIF3E
BMF
COL26A1
RBBP5
RPS29
MCCC2
PPP1R13L
POLR1G
RPL27
RNFT1
BCL9L
BRWD1
MET
CNPY2
AKAP10
PLK3
ZNF165
WDR25
WARS1
ARRB2
RPP25
PPM1A
ABHD2
C12orf45
FKBP4
TMEM164
LOC114841035
FKBP2
OSBPL2
CAMKK2
CNOT3
ROPN1B
FURIN
TMEM80
DEAF1
STAG1
ANKRD40CL
CACHD1
TWIST2
PUSL1
GFUS
ACAP3
COQ10B
PES1
STK35
RBM15
HOXB8
HOXB7
FOXRED2
UNC93B1
ALDH3B1
SLC36A1
ESRP1
ISCA1
PPARGC1A
KLF10
METTL23
JMJD6
WWOX
ZNF248
TFF1
TTLL4
AHCTF1
SGK3
STMN3
RTEL1
GIT2
ANKRD13A
CASC3
CANX
ITPRID2
RPS19
CRYM
NAB2
BMP7
DUS3L
FAM86B2
NCAPG
SQLE
UBE2S
REXO4
ADAMTS13
FUS
UMPS
SLC25A32
DCAF13
UQCRC2
AFF4
CYRIB
TMED3
ASB6
QRICH1
LRATD2
GNB2
SRFBP1
CCNYL1
CIPC
EXOSC2
MIDEAS
PCBP1
MRM3
GLOD4
MAN1B1
PAK1IP1
C6orf52
TAF9
RAD17
AK6
BHLHE41
BRIP1
RHOD
DCLRE1B
AP4B1
ZER1
RAB3D
TTC7A
MCFD2
TSEN54
CASKIN2
TMEM205
CCDC159
KMT2E
SMG9
TPR
ODR4
CDKN3
MTCL1
ASS1
BTN3A2
SNAP29
PI4KA
HNRNPF
C14orf93
ATG16L2
WDR35
CALML5
CSDE1
PMVK
SLC35E2B
OSER1
ABCF1
SYNGR4
PIM3
SYS1
MACROD1
GCGR
CABIN1
TAGLN2
ASNS
NUCKS1
PRC1
SLF2
COL23A1
TRPC4AP
MRPS2
C9orf116
USP17L21
USP17L12
USP17L11
SHMT1
RLF
RNMT
FAM210A
GRHL2
SREBF1
APC
ABAT
FRAT2
IFNGR1
ZNF696
LCORL
MMS22L
PRCD
CYGB
SIKE1
SMG7
PDE4A
PARN
BFAR
DUSP28
ANKMY1
UBFD1
EARS2
ADGRG7
CKS2
ING5
EOLA2
ZNF239
TDRD5
CORO2A
SRCAP
LOC730183
LIN52
ALDH6A1
SLC2A8
DENND2C
ESRP2
CORO7-PAM16
CORO7
EBPL
RPS14
CASP7
DDX18
CDK18
SYNCRIP
BANP
THAP7
SETDB1
ELAPOR1
TBCB
POLR2I
OVOL3
SIX5
SLC35C2
ZCWPW1
MEPCE
STK40
RAB3IL1
DNASE2
PTPN4
UBA52
RITA1
DDX54
C20orf27
TOP2A
PDIA5
SCN5A
SUPT5H
NBN
YTHDF1
TMEM14C
PPP1R3B
CENPF
PSMD9
HPD
PRRC2B
TTC39A
OBSL1
INHA
SURF6
SLCO4A1
NOL11
FAM174C
ASH2L
CPEB1
TMEM87B
TTBK1
MARVELD1
TWNK
MRPL43
SLC26A2
TRIP4
SPRR2F
RCBTB1
C9orf139
ABCA2
NCL
NUP42
IGSF9
CNIH3
PRR19
PAFAH1B3
TEX14
RAD51C
POP7
MARVELD2
ZBTB40
ATP6V0E1
GOSR2
SPRING1
RNFT2
TADA3
ARPC4-TTLL3
ARPC4
HRC
LRRC8B
PBX3