ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457296 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◣ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CIART
PER1
CRY2
DBP
AGAP11
ADIRF
PER2
CRY1
NR6A1
PFDN4
TEF
RORC
NR1D1
BCAS3
TRAPPC6A
BLOC1S3
CLUAP1
C16orf90
SNRPE
FZD1
KAT5
PIP4P1
PLEKHF2
NPTN
YPEL5
LNX1
PLD6
MAP1LC3B
FBXO31
FRG2C
TXNIP
OSGIN1
RALGDS
GET4
PTBP1
CTDSP2
SLC20A1
IGSF8
DUX4
PDXDC1
NOL8
CENPP
RNF43
EIF5A2
MARCHF9
CDK4
FAM76A
TRPV4
LRRC56
HRAS
TRIM37
BAHCC1
CLN6
MAPK6
CDIPT
MYL12A
P2RX2
LRCOL1
BCAR1
DOCK6
SLC25A36
PLEKHG2
PPM1D
CEP63
ANAPC13
ZMYND8
CTDSP1
TXNRD1
RHOF
RFESD
PMS2
AIMP2
MICALL2
CTTN
BMP7
TNRC18
LOC100129484
NPR3
UBE2B
CDKL3
HOOK2
CEBPB
UTP18
MBTD1
PTCD3
POLR1A
UVRAG
ARRDC4
CCDC24
BCAS4
GTF2A1
PNPLA7
MRPL41
CSTF1
AURKA
DDX5
AVPI1
ANKRD12
USP32
DPP3
BCAS1
NUDCD3
PRKCI
MOCS3
DPM1
TMEM116
ERP29
PLEKHG5
SENP8
MYO9A
TADA3
ARPC4-TTLL3
ARPC4
GSTP1
LYRM9
FAM117B
SLC35E2B
CSDE1
TUFT1
TMEM94
MAP2K7
TNNI3
SRP54
TIPARP
PNO1
DDX42
CCDC47
CENPN
STX4
PHKG2
RNFT1
GNB2
PPP1R13L
POLR1G
IFRD2
COX14
FAM53C
CDC25C
FLCN
IGFL4
GMFB
TEX14
RAD51C
FRG2
SLC2A4RG
LIME1
BCL6
SLC35E2A
SGK3
DCLRE1B
AP4B1
BRIP1
PC
LRPPRC
EIF3B
RNASEK
C17orf49
ATG101
EED
PRORP
PPP2R3C
TMEM260
HIF1A
VMP1
PTRH2
ISOC2
TIMM22
PTEN
KLLN
MEA1
KLHDC3
GZF1
PIK3IP1
OSGEP
APEX1
MADD
RAD9A
TBC1D17
AKT1S1
PARD6B
NBPF1
GABARAPL2
GIPR
HSPH1
UQCRC2
GRHL2
RCCD1
ARID3B
MVB12A
BCAM
RBBP5
MRPS23
GREB1
ELAVL3
EMC2
NME1-NME2
NME1
DACT3
TRIB1
SPTBN4
BLVRB
H2BC6
MBNL1
CRYAA2
CRYAA
EIF4A1
SPATA17
GPATCH2
PAK1IP1
C6orf52
RHBDD3
EWSR1
PPP1R3C
ESYT3
SPAG9
AP1S1
C6orf62
RHOD
SELENOW
PSMD6
CHFR
NOCT
APPBP2
PDE12
STX16
MTMR14
RPEL1
TATDN2
SSBP2
TUBD1
RPS6KB1
TENT5B
RNF223
PRMT1
HBP1
ZNF778
SLC25A19
RAB3D
TMEM205
CCDC159
UNC13D
TRMT12
CD55
TCERG1
POLG
KHSRP
CLTC
EIF3E
SLC12A4
ZBTB37
SLC35A4
APBB3
CCT5
ATPSCKMT
CENPA
NCOA3
FAF1
ARFGEF2
GTPBP6
TMEM53
ARMH1
ATF7-NPFF
ATF7
S100A11
STK35
ILF3
HES4
HPS5
GTF2H1
SULT1A4
SULT1A3
FNIP1
ZNRF2
C3orf14
VPS11
ALDOA
FAM214B
ZHX2
SSBP1
AMHR2
ZNF687
MAN2A1
NUDT4B
ATP2A3
RNF13
TRIP6
KMT5A
EXOSC5
BCKDHA
WDR62
THAP8
MCCC1
SIDT1
NR1H3
ACP2
KHDRBS1
NRAS
SLC35A5
ATG3
RPS19
HSF2
SLC49A4
HSPBAP1
UBE2H
NPM1
SLC35B1
SLC34A3
RNF224
CYSRT1
RBBP6
KDM6B
RPS29
DHX40
SKA2
PRR11
ACVR2B
RBBP8NL
PES1
DGKZ
WDR74
BCAS2
NPW
SULF2
CCDC107
SSBP3
BOLA2
MRPS18B
SIRT4
ZFP62
SCAF1
RRAS
UBAP2L
C1orf43
UBFD1
EARS2
PDE4DIP
WDPCP
MDH1
COA1
DNAJB5
ZER1
PMVK
UCKL1
SYNGAP1
CUTA
M6PR
KLRG1
C1orf174
HDGFL3
TSTD2
NCBP1
NR1H2
STAM2
KMT2E
AGFG2
PLEC
NQO1
H3C15
H3C14
H2AC19
H2AC18
ANAPC15
NKIRAS1
NR1D2
LAMP1
MTRNR2L1
COMMD8
PER3
CLCN7
HOXC13
GTF3A
ERCC6L2
MTHFR
CLCN6
ZNF292
VPS26A
AP5Z1
SPG21
DAZAP2
FIBP
CCDC85B
CDK12
ZNF595
WASHC2A
S100A13
CHTOP
MTHFD1L
SNRPA
C19orf54
DENR
LRATD2
SERF2
INAFM1
CAMKK1
TRAPPC2L
GALNS
COL23A1
MRPL40
HIRA
G3BP1
SLC33A1
SLC25A13
RPUSD4
FAM118B
WASHC2C
ZNF331
CREBRF
MORF4L1
ALG13
PRDX6
SLC35B2
SPNS1
EPC1
MAPK1IP1L
TMEM185B
B3GNTL1
CPEB1
PRKAR1A
SDR39U1
ZNF438
SRSF1
LSM12
G6PC3
ZNF263
RRAGC
TRMO
ATP6V1H
TRIQK
ADNP2
NFX1
XPOT
COQ10B
HMGB2
GYG1
GSK3B
TOB1
HERC3
TKTL1
TEX28
SRSF5
MAP4K1
EIF3K
THOC7
ATXN7
PRPF3
ATXN2
TTYH1
TMEM18
USP36
GBE1
PSMD5
CCDC116
PPP1R3D
IP6K1
FAM217B
KLF1
GCDH
LRFN4
FAM214A
TCF25
TPD52L2
ABHD16B
UBE2Q1
C2CD4D
CCNL1
ARRDC3
RAB17
SPATA25
NEURL2
CTSA
YBX2
DHPS
ZNF706
SRCAP
LOC730183
PUM2
NAPRT
MROH6
EPM2A
SNAP29
PI4KA
SCAF11
CLN3
APOBR
SEPTIN2
HDLBP
RMND1
ARMT1
THAP5
DNAJB9
NTN5
PAF1
THNSL1
SUMF1
KDM4C
NBN
GGA2
MARCHF8
COL6A1
STAT6
ZC3H4
EIF1
HNRNPF
BHLHE40
NAA50
ATP6V1A
DPH2
B4GALT2
ATP6V0B
RMI1
HNRNPK
BCLAF1
TMEM187
HCFC1
PPAT
PAICS
POLI
RPS11
TM9SF1
HEXA
ZZZ3
RRAGB
SLC25A39
COMMD9
EIF4B
PPFIA4
H2BC12
H2AC12
OPRL1
SPAAR
NTMT1
TBCEL-TECTA
TBCEL
MAMDC2
MTCH2
CNOT3
NFYC
CNNM2
UCP2
ARIH1
CHMP2B
EPB41L4B
CD164
MAN2B2
MED13
SLC35C2
RFX3
SETD1A
UNK
ZCWPW1
MEPCE
LFNG
SLC25A26
RIMBP2
NOP14
GRK4
BRPF1
WTAP
SOD2
TMEM141
FNBP4
CCDC183
SLC3A2
DGAT2
SNX5
MGME1
SLC25A25
NAIF1
LAMC1
YEATS4
ISG20
HNRNPA2B1
CBX3
ZNF335
SRP9
CASC3
MCM7
LKAAEAR1
BAX
AP4M1
KLF11
TRIM8
DHODH
HNRNPH2
LCN12
LARP1
HDAC4
CFAP251
C8G
RPSA
GABPB2
COLEC11
CAP1
MAPK15
MTRNR2L8
ITGB1
PPP4R3B
CLN8
TUBA1B
ILVBL
GALR1
VPS33A
MAL2
POLR1D
LNX2
KAT7
ZFP91
LPXN
H4C15
H4C14
ENSA
CLK1
ADK
TUBA1C
SYNCRIP
DDX3X
MAX
PHF23
SREK1
ERCC1
RAD50
KLHL12
STXBP4
COX11
EMP3
CCDC114
RNF139
YARS1
S100PBP
NAPA
ZBTB7B
MMADHC
MZF1
WDR89
YWHAZ
ADGRB1
ZFP1
SLC43A2
TBX2
PCBP1
DDX59
TBC1D13
SPPL3
SLC39A6
IGSF21
CD2BP2
ATIC
XRN2
THRAP3
SLC25A24
RLF
L3HYPDH
JKAMP
CYB561
EIF4G1
PPM1A
CIPC
INO80
EIF5
TMCC1
FBXO46
SLC25A11
RNF167
HEXIM2
EIF4A2
DLX4
ECH1
SPATA2
PRC1
PEX14
DFFA
CALM2
ZNF84
FBXO5
LUC7L2
PDP2
RNMT
FAM210A
COPS7A
TJP2
STMN1
PIGO
NDUFS6
MRPL36
MLH1
EPM2AIP1
HES1
KPNA2
TBC1D15
SLX1B
SLX1A
BOLA2B
SGO1
AMDHD2
UBR5
SMARCD2
PCBP3
ZNF219
TMEM253
PDCD6IP
CDK19
AMD1
PTP4A1
MIOX
ADM2
ASPH
GART
DDX43
PPIA
GLS
STX6
NSUN3
DHFR2
PRKDC
MCM4
GPBP1
COX19
SLBP
TRMT112
PRDX5
USP9X
H3-3B
TRIM59
CSRNP1
ATOH8
PACSIN3
ANAPC7
PIGW
MYO19
TARDBP
HIRIP3
UBQLN1
HNRNPA1
CBX5
SLC35F6
CHKA
KLF10
RBM3
PPP2R5C
PABPC1
USP48
MTDH
FBXL18
PSME3
MED26
RTN4RL1
DPH1
NAMPT
AEN
JUNB
FBXO33
TUBGCP5
FBXW4
DNAJB1
LAMTOR4
TRA2A
ADGRE5
OSGIN2
TMEM88
NAA38
HNRNPC
CYB5D1
SEPTIN9
RIPK2
PCNT
C21orf58
AP1G1
CACYBP
PRMT2
IREB2
DDX23
PCIF1
ERGIC2
DEF6
LRCH4
FBXO24
CYTH2
GCLC
BOLA2-SMG1P6
TMED10
DCBLD1
ZNF217
CCDC86
TFAP4
POLR2J3
WDR6
ARL4A
FCMR
ZNF384
MTRNR2L2
MSH3
DHFR
MYL6
U2AF2
PARP10
BCL9L
SRRT
SPTSSB
LTV1
SMG9
SERINC3
PGP
BRICD5
RNF31
PSME2
FAF2
ARF6
SETDB1
PHF12
HSF1
BOP1
DUSP1
PPP1R15A
PLEKHA4
GOLIM4
OGFOD2
ARL6IP4
TANC2
DARS1
TRA2B
TOP3A
SMCR8
TFAP2C
KIFC1
TAGLN2
PSMC5
FTSJ3
CHMP3
USP17L22
USP17L20
GMNN
CYC1
BANP
TMEM114
HNRNPD
MXD3
AHI1
TREX1
MICU1
CAD
TIPIN
KIAA0895
ANLN
PIK3R3
CCDC186
RITA1
OSBPL1A
DDX54
KPNA3
SRSF4
RRP9
PARP3
CCDC6
LAMTOR1
YIF1A
TMEM151A
NOP58
HNRNPH1
METTL23
MEF2D
JMJD6
ELOB
C1orf54
APH1A
TIMM44
ZNF24
SOCS5
PNISR
DUS3L
ZNHIT1
PLOD3
METTL1
EEF1AKMT3
CYP27B1
ZFP36
DNAJB12
TSPAN31
NPC1
AGAP2
NCAPD2
MRPL51
DVL2
RABGGTA
PNPO
EGR1
DOK7
PPIL3
NIF3L1
SYNRG
TMEM251
MOAP1
GNAS
DDX6
AIG1
PPP1R15B
JADE2
CIC
SLC25A10
PAIP2
SERTAD3
TNFRSF12A
THOC6
HCFC1R1
CLDN6
TET3
SENP2
HNRNPA0
C17orf58
ZAR1L
FAM86B1
BRCA2
WDR97
TMEM184A
NUP188
MAF1
DYNC2I2
DOLK
CC2D1B
SUPV3L1
SF3B4
CANX
COPS3
BRD2
TOR1AIP2
TOR1AIP1
ZC3H11A
ZBED6
SESN1
IQSEC1
DDTL
DDT
DDIT4
CEP57L1
SPATC1L
SARAF
CREBZF
ALOXE3
RPL27
MED1
CHD1
NAB2
KRT80
KMT5C
GOLGA5
SAE1
SOX12
PARN
LYRM1
DCUN1D3
BFAR
IRF2BPL
HIPK1
PPP5D1
PDPR
CALM3
GABPB1
LIN54
TAX1BP3
EMC6
SERPINE1
MDM2
LDHA
PDIA4
GPRC5A
TSPAN4
RSRP1
POLR2L
FMC1-LUC7L2
FMC1
TBL1X
SYT1
UBE2M
ESRP2
CHMP2A
AMOTL2
SMC4
IFT80
ARF3
ZNF57
OR2B11
NCL
CBLL1
ZBTB8OS
RBBP4
ORC4
MBD5
DUSP7
NAT10
DOP1B
ZNF286A
SLC30A1
C15orf39
PLK4
CFLAR
PMEPA1
RBM8A
RPL10
TOR3A
PRKAG2
ETF1