ChIP-Atlas: Target genes

Potential target genes for ZNF558

Query protein: ZNF558
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16498354 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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ZNF558's Target genes

◢ ZNF558: Average

◢ SRX2423956: 293

◢ SRX2423957: 293

◣ SRX16498354: Hep G2

◢ SRX16498355: Hep G2

◢ ZNF558: STRING

NPAS4
XKR7
IQSEC3
RAB37
LIN28A
HTR5A
FAM24A
NKX1-1
INSM2
SMIM17
BARHL1
CELSR3
L1CAM
RANBP3
KCNH7
CPLX2
GLRA1
FRG2C
CHGB
LHFPL5
CLPS
SIGLEC10
DLGAP3
RHOG
HPCA
MTRNR2L1
SCRT1
DGAT1
MTRNR2L2
MSH3
DHFR
EPHA10
LPIN1
NTSR2
ZC3H18
SCRT2
GDAP1L1
ZNF23
KLF11
NPPB
SRRM3
RTBDN
MAST1
SNAP25
PTPRS
MAPK8IP2
CDIP1
DUX4
VGF
CADM3
MTRNR2L8
KATNA1
UBE2Q1
CHRNB2
MYT1
LEMD3
CCDC92B
OGDHL
KDM3A
MMP24
SPOP
UNC80
BPIFA3
CCDC200
RFC1
PMS2
AIMP2
TMEM230
PCNA
CDS2
SLC7A6OS
PRMT7
PTMA
N6AMT1
RBM28
EAPP
LOC102724770
DGCR6
CABP7
RNF130
PMVK
GCFC2
HBQ1
HBA2
HBA1
NOMO3
NOMO2
ABCC6
ZPBP2
IKZF3
FRG2
EVI5
HDAC2
PTPRN
PAX5
ICMT
HES3
HMGA1
SCAMP5
SPATA18
KCNK12
SEZ6
STAT1
AATF
RAP1GAP
VWC2L
USP14
ANKRD36
SLC12A5
CENPA
ANAPC11
ALYREF
ZFYVE27
AHCYL1
ANK1
SLC39A3
FN3K
MARCHF4
CHGA
USP30
SVOP
PIK3R3
ANKRD36C
DLL3
TGM1
RABGGTA
NRSN1
STMN3
RTEL1
TIGD1
EIF4E2
PGRMC2
KCNH6
TPH2
ARFGAP3
SLC23A3
RETREG2
CNPPD1
DNAJC6
CA4
PDE1C
SCGN
RNF187
MLN
STK25
RAD54L2
PPP2R2C
SYP
GRM1
PPFIA3
C19orf73
PCDH8
CERS6
NOC3L
H4C12
H2BC15
H2AC15
H4C11
TMEM181
RESP18
ZNF337
DTD2
CYP21A2
LRRC59
TMEM242
E2F6
SHOX2
ENO1
NSUN5
LOC112694756
USPL1
HMGB1
PGBD5
CEP295
CTDSPL
TOMM5
CHRM4
SEH1L
PUM2
NDUFAF5
ESF1
RPL31
ACAD9
GTF3A
NCOA5
ZSWIM1
SPATA25
NEURL2
CTSA
TMEM129
TACC3
SLBP
SLC25A36
RSPH3
FMNL3
WDSUB1
SUGP2
ARMC6
QTRT1
FBXL16
BCL7B
SLC25A10
MRPL12
DNAJC11
FANCL
LTB4R2
LTB4R
CIDEB
TMX3
CCDC102B
TRIM67
SELENOV
MFF
ABCA3
RNF103-CHMP3
RMND5A
SF3A2
PLEKHJ1
TDRD7
ODC1
POLE4
SST
CRLS1
KCNC3
ACTL6B
PRKDC
MCM4
MRPL3
CRH
TINF2
NEDD8-MDP1
NEDD8
GMPR2
UTP11
FHL3
FOXRED2
STX18
H2BC14
H2AC14
SGTA
THOP1
ATP6V1B2
SEC14L1
TMEM268
ELAVL3
CDCA7
NPIPA3
NPIPA2
PLA2G10
CNPY3
WDR36
NSFL1C
TTC7A
MCFD2
SOS1
PSMD7
ZCCHC7
AKAIN1
POLR2J3
SLC7A14
DISP2
DHDDS
NR1D1
FAM177A1
PSMD3
CACYBP
SAYSD1
SCAND1
PAQR4
KREMEN2
ENOSF1
BAIAP2
ZFR
CLVS1
HDAC4
TTPAL
TCAIM
GINS1
INTS12
GSTCD
ZNF473
VRK3
FERMT1
SYNGAP1
PHF1
CUTA
TUBA1B
TNXB
HS3ST2
ACSL6
TM9SF1
IPO4
LAMP1
PET117
KAT14
PDE4C
SLC13A3
DDX1
AKAP10
NEUROD1
CMTR2
NUP62
IL4I1
ATF5
ZNF3
COPS6
SPNS2
AP3B2
SHISA7
EFCAB13
SIT1
CCDC107
ARHGEF39
TMEM179
CLCN7
GRM2
ST8SIA3
AAR2
MRPL44
PPP1R3C
AIP
PRMT8
STX16
NOL7
USP37
CNOT9
SEZ6L2
ASPHD1
ZNF783
SCFD1
PLEKHM3
SGF29
RNASEH2C
KAT5
NHLRC1
SPTSSA
TBC1D13
YPEL1
RRP1B
HSF2BP
PBX3
MFAP3
FAM114A2
PTPRH
RSL1D1
ZNF84
POLR3E
HS6ST1
CDK5R2
BICDL1
CFDP1
GPR158
GDI2
CPQ
ZNF292
ATIC
CYB5R4
SCAF11
RIPPLY2
WASHC2C
GOPC
PPY
TRADD
NOL3
HSF4
FBXL8
TEFM
CCDC88A
EPM2A
SCAPER
TACO1
PEX3
ADAT2
GLS2
C14orf93
NPDC1
ENTPD2
LMCD1
SLC44A1
TUBB3
MC1R
TSEN54
LLGL2
CASKIN2
SLC18A3
CHAT
GRIA2
SCAMP4
ADAT3
RMI2
WASHC1
KIAA0895L
EXOC3L1
E2F4
DPYSL4
CFAP65
SLC25A21
NCAN
DNAJB2
STAT3
CDK5RAP1
PEDS1-UBE2V1
PEDS1
SLC17A9
JPH3
LDHA
WRNIP1
MYLK4
LUC7L
FAM234A
UNG
ALKBH2
KRI1
CDKN2D
CNTRL
C5
E2F1
MIPOL1
EXOSC6
OSBPL8
TBC1D15
DNER
MED23
ENPP3
EIF3C
HECTD1
EIF3CL
EIF4A3
ASCC3
DIABLO
TRIM44
EZH1
CYP4F3
TMEM186
PMM2
HAAO
VRK2
TMEM106B
COMMD1
CCT4
TCTE3
ERMARD
PC
TK2
CKLF-CMTM1
CKLF
RBM45
PDE11A
LTV1
MPHOSPH10
MCEE
IRF9
HEATR5A
ESYT3
HCN2
CFL2
GTF3C3
C2orf66
LSM12
G6PC3
DNA2
POLR2D
SLC30A6
GMCL1
JPH4
GJA10
EBAG9
LRP2BP
ANKRD37
THAP7
P2RX6
RBM18
MRRF
ANKRD34C
KANSL3
FER1L5
HHATL
HES6
EIF2B3
TCFL5
TOMM34
STK4
CPNE4
XKR4
ZSCAN30
MTHFD1L
KCTD18
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
PROCR
PHF3
PDHB
KCNAB2
AGMAT
RRN3
NRL
PCK2
MAP2K2
RNASEH1
TTC9C
HNRNPUL2
RNF166
NT5C
CTU2
NABP1
TRIP4
PCLAF
MTIF2
PCSK1
DCP1A
AARS2
ZNF219
TMEM253
C6orf136
GJD3
VTA1
NMBR
GTF2H2C_2
GTF2H2
HNRNPF
NBPF1
PTDSS1
MTERF3
SNRPB
RPL37A
EPB41L4B
HM13
PNPT1
CEMIP
NMS
CCDC116
WDR35
PGD
SLC16A3
RAB5IF
C1QL2
FRA10AC1
CCNC
MRPL17
TSSK4
TMEM169
PECR
DBI
C2orf76
UNC13A
TRPM8
GTDC1
WTAP
SOD2
LAP3
SRF
CUL9
POLR1B
TAOK2
GXYLT1
SLC45A4
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
UBE2V2
ABCB6
ENTPD6
AP5S1
SPHK1
PDE6D
COPS7B
G2E3
CSE1L
GET4
SULT4A1
BUD13
EIF3B
POGK
HEXD
CACNA1B
TRMT6
MCM8
UNC50
COA5
MLLT1
ROMO1
NFS1
DHRS4L2
MRTFB
APMAP
PLD6
ZNF341
EBPL
TUBGCP3
ASS1
TASOR
ANKAR
AURKAIP1
PTP4A2
NAGK
TRIM65
MRPL38
PREPL
CAMKMT
SLC25A13
RPS15
HSPE1-MOB4
HSPE1
HSPD1
SLC6A12
POU2F2
UNC45B
NLE1
RUNDC3A
ATRN
RTN2
PPM1N
BCKDK
GOT2
SMG1
MIEN1
GRB7
PSME3
BECN1
H3C3
H2BC3
TENT4B
GGA2
CTNNB1
PYCR1
MYADML2
MAFG
NUF2
NME1-NME2
NME1
NHEJ1
THNSL1
TMEM107
PSD4
HNRNPDL
ENOPH1
TFDP1
CTSE
TATDN3
NSL1
GEMIN2
MIA2
ZMYND10
TMEM115
RASSF1
NPRL2
CYB561D2
DNAJA2
RBL1
TIMM22
TAF3
MARCHF7
THUMPD3
ABT1
EXOC2
PSMG4
PYGB
SNAP47
JMJD4
H1-2
OPRM1
AGPS
C1QBP
KLHL9
TBCD
RAD50
MSH5
DDAH2
CLIC1
SETD6
LRRC37A3
MOB4
LONP1
CATSPERD
MTHFD2
KCNH1
PRMT5
RBM12
CPNE1
NCK1
ATP5F1E
ZSWIM7
TTC19
NET1
SLC9A8
RAB11FIP4
FOXJ3
NDUFS7
FANCA
ERGIC3
TXLNA
TSPAN10
NPLOC4
HEXB
EIF2D
BRMS1L
LCLAT1
DPP10
TEX46
KDM1A
BNIP3
WDR74
STX5
CSTF1
AURKA
SNRPB2
RANBP2
UGGT1
CLU
RIOK2
RPL27
IFI35
RIF1
MRPL21
IGHMBP2
DPY19L4
NSG2
ANKRD36B
BIRC6
CLUAP1
C16orf90
HBS1L
OLA1
NCOA3
RAB4A
IPMK
CISD1
EFHD1
MZT1
BORA
BSN
ZDHHC22
RMND1
ARMT1
MRPL45
FAAH
RAB18
CCDC88C
ZCCHC3
C20orf96
METTL9
ZC3H6
SMIM4
NT5DC2
HLF
ADNP
LMLN2
C14orf119
ACIN1
RIOK1
CAGE1
ZFPM1
COCH
CAB39
ZKSCAN2
DHX40
CCT2
RNPS1
MRPL52
MMP14
SLC7A7
ITFG2
PPARD
FAM227B
DTWD1
NOMO1
REX1BD
JPT1
CEP131
RPS7
FITM2
SIRT4
NOP9
DHRS1
NUBP1
SIRT1
GDAP1
ZFR2
ATCAY
SLC35F5
WWP2
NOB1
SUPT3H
PSMF1
PDP2
MOGAT1
TRA2B
NDUFAF1
C10orf88
VPS16
PCED1A
R3HCC1
TPBGL
TMEM177
TMEM167B
ERCC5
TTI1
RPRD1B
PPM1G
MARCHF8
COPS7A
MRPL58
PKP4
CCDC148
NFKBIA
ZDHHC14
ZFP1
RPL10A
PTGES3
MLH3
EPHX2
MTF2
FUS
ADSL
DDX18
MNAT1
ZBTB9
MSL2
E2F3
PCNX4
GPCPD1
ACTR3
RBM34
TSEN15
HEXA
ZNF843
USP42
SRSF6
PAQR7
HLCS
FBXO41
EGR4
DDX19A
RINT1
PUS7
IDH3B
LHX5
IGF1R
GPR78
SPAG4
MEIG1
DCLRE1C
MCUR1
SOGA3
WDR43
NFATC2IP
LTN1
ABHD12
FBXW8
AHI1
FAM53C
CDC25C
PTPN2
NCL
PSMB5
PSMB11
ZNF131
GPR6
CCNL1
MRI1
C19orf53
FAN1
ID1
TUBB2A
TEKT2
ADPRS
TRNAU1AP
WDFY1
YTHDF1
RPF2
DDX19B
AARS1
VPS29
RAD9B
TXNDC5
SMIM24
HBM
AKAP11
FAM187A
EFTUD2
CCDC103
C10orf95
KCTD5
ITPRID2
MRNIP
TRMU
MYORG
MMAA
HHIPL1
DYRK4
CCDC85C
C9orf24
ARIH1
SPRYD4
SMARCAL1
UBAP2L
C1orf43
MED31
C17orf100
NFAT5
TEAD3
ANO10
ABHD5
CDK5RAP3
XYLB
PHF20
WASHC4
STXBP6
SHQ1
PRKD3
TM7SF3
MED21
RUVBL1
USP4
SOST
EEFSEC
CDC27
HDDC2
CITED2
ZNF628
UBE2N
OSTM1
NAT14
CBFA2T2
SDCBP
TRMT2A
RANBP1
HTR1A
DCAF11
CHEK1
ABCF1
MSH6
PPP1CB
SNAI1
ERN1
SLC35A3
NEU4
DHRS4
TXNRD1
MRPS5
TMEM18
UBE2D3
CISD2
MAMDC2
DRG2
TBCB
POLR2I
OVOL3
CCNJ
MYH7B
GSS
POLR2C
DPY30
THUMPD2
NR1D2
NKIRAS1
FOXQ1
C16orf72
BMS1
NANP
CDC16
MRM3
GLOD4
NADK2
WDR89
ZP3
INSR
AEBP2
CWC25
SDHAF3
ZACN
SRP68
GALR2
ARHGDIA
NFATC3
PSMA1
PDE3B
FOCAD
CCAR2
C8orf58
NDUFAB1
PPP4R3B
NOP58
TUBA4B
TUBA4A
STK16
GLB1L
PRKRA
PJVK
TWF2
PPM1M
FBLL1
DIXDC1