ChIP-Atlas: Target genes

Potential target genes for ZNF558

Query protein: ZNF558
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16498355 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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ZNF558's Target genes

◢ ZNF558: Average

◢ SRX2423956: 293

◢ SRX2423957: 293

◢ SRX16498354: Hep G2

◣ SRX16498355: Hep G2

◢ ZNF558: STRING

NPAS4
XKR7
IQSEC3
MTRNR2L1
FRG2C
INSM2
MTRNR2L2
MSH3
DHFR
HTR5A
RANBP3
RAB37
NKX1-1
SMIM17
DUX4
CELSR3
LOC102724770
DGCR6
MTRNR2L8
FAM24A
FRG2
CHGB
GLRA1
LIN28A
NOMO3
NOMO2
ABCC6
BARHL1
CPLX2
STAT1
STX16
POLR3E
HPCA
KANSL3
FER1L5
SLC7A6OS
PRMT7
EAPP
L1CAM
TIGD1
EIF4E2
KCNH7
TMEM242
H4C12
H2BC15
H2AC15
H4C11
MED23
ENPP3
FITM2
NUF2
RBSN
STMN3
RTEL1
MRPL44
LRRC59
LHFPL5
CLPS
PEX3
ADAT2
DDX1
DSTYK
ACTR3
MAPK8IP2
SNAP25
GINS1
GDAP1L1
UNC80
MRPL45
CLUAP1
C16orf90
SCAND1
ZFP1
ZNF358
MCOLN1
TM9SF1
IPO4
RPS7
GTF3C3
C2orf66
MTIF2
TSSK4
SIGLEC10
TMEM230
PCNA
CDS2
RNF130
UBE2Q1
CHRNB2
SF3A3
TOP3B
NDUFAF5
ESF1
CBFA2T2
GTF2H2C_2
GTF2H2C
DLGAP3
ZPBP2
IKZF3
SLC39A3
CDK5RAP1
ZCCHC3
C20orf96
DDX18
FAN1
AATF
CCDC88A
CEBPE
SPOP
ZNF329
VGF
FRA10AC1
LRP6
RAB5IF
HECTD1
IRF9
MYBL2
NPPB
POP7
FAM187A
EFTUD2
CCDC103
CCAR2
C8orf58
LSM12
G6PC3
SNRPB2
RAP1GAP
ABT1
MRPL53
MOGS
FN3K
SNRPB
TBC1D19
PPFIA3
C19orf73
MIPOL1
N6AMT1
AP3S2
SOS1
CDC73
PSMB8
TAP2
NPIPA3
NPIPA2
NRL
DHRS4
DCAF11
PDE6D
COPS7B
ENOSF1
CMTR2
PMS2
AIMP2
ZSWIM1
SPATA25
NEURL2
CTSA
WASHC2C
UBOX5
FASTKD5
TCFL5
MRPS23
AFTPH
AKAP10
HEATR5A
ZNF219
TMEM253
CPPED1
CTNNBL1
MMP24
ZNF292
RWDD1
CCNL1
DHDDS
ZNF513
SNX17
EIF2B4
NOP9
DHRS1
TINF2
NEDD8-MDP1
NEDD8
GMPR2
NFATC2IP
ATXN2L
GGCX
BAIAP2
TOMM34
STK4
COL23A1
TMEM14A
PPARD
TTI1
RPRD1B
COPS8
NDUFS7
NR1D1
TBL3
RPS2
RNF151
NOXO1
RNMT
FAM210A
VTA1
NMBR
NCOA5
CNEP1R1
ZFYVE27
TEFM
SAYSD1
TAF3
ZCCHC4
TCAIM
EXOSC6
AHCY
NUS1
RTBDN
MAST1
USP4
DEXI
CLEC16A
CCDC200
PGRMC2
ZER1
GTF2H2
DOCK6
HBQ1
HBA2
HBA1
SCFD1
RUSF1
FAM149B1
ECD
ZNF337
PRMT5
MRI1
C19orf53
RBM18
MRRF
AGPS
CRB1
MEMO1
MRPS31
KLHDC4
LEMD3
GMCL1
SNAP47
JMJD4
ARL6IP1
FOXN2
GSPT1
HBS1L
COQ9
CIAPIN1
KCTD13
CTNNB1
ZBTB9
MYT1
EXD1
CHP1
PGP
MLST8
BRICD5
CASKIN1
HDAC4
G2E3
SPATC1L
KATNA1
RSPH3
EPB41L4B
CTSH
ZFHX2
THTPA
ERLEC1
ASB3
DBNDD2
CHGA
TTPAL
MOB4
ESCO1
TRMT6
MCM8
NUP62
IL4I1
ATF5
NDUFS3
KBTBD4
FAM180B
RIF1
POLG
TMEM14B
PPP1R3E
BCL2L2-PABPN1
BCL2L2
TFIP11
INTS12
GSTCD
NOL7
TRPC4AP
PARL
DTD2
PTP4A2
NAGK
RABL2B
GCFC2
PLEKHM3
ATG16L1
PRLH
SHOX2
NDUFA12
MKS1
ICMT
HES3
NOC3L
DCP1A
LAMP1
ADNP
RBM12
CPNE1
MFAP3
FAM114A2
AAR2
TBC1D13
TDP2
ACOT13
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
ACAD9
ZNF843
EDC4
DPP8
CYCS
SLC35E2A
DLK2
MRTFB
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
ADGRG1
VDAC2
SRCAP
LOC730183
CORO1A
RFC1
SLC12A5
CCDC59
CSE1L
MRPL21
IGHMBP2
BRF2
CCDC83
ASXL1
ATP9B
RPL27
IFI35
PTPN4
USP32
DHX8
VPS33A
DDX19A
TGM1
RABGGTA
NME1-NME2
NME1
SAMD10
PRPF6
TRMT61B
TOMM6
PRICKLE4
FRS3
NHLRC1
TOB2
CDC5L
TMEM41A
TJAP1
PCIF1
PRR5L
COMMD9
UTP20
POLE4
SST
SYNGAP1
PHF1
CUTA
RSL1D1
SCAF11
GEMIN2
C20orf144
ACTL10
PDIA4
PTPRN
SLC23A3
FMNL3
CRYM
LUC7L
FAM234A
NHEJ1
BRMS1L
GPN1
CCDC121
THOC3
TOMM22
CPE
ZNF23
SEC14L1
LTN1
SCAMP4
ADAT3
RPL10A
WFDC3
DNTTIP1
OVCA2
TTLL11
EIF3C
SCGN
ATG5
MFF
EIF3CL
RPS15A
GINS3
LMLN2
C14orf119
ACIN1
CCDC66
API5
TOX4
RAB2B
SRP54
LRRC47
NUP153
CWC25
TMEM101
FAM228B
TP53I3
SF3B6
METTL9
PSMF1
ID1
LATS1
USP30
RBBP9
LRRC37A3
NRSN2
SLC45A4
PSMD12
TSN
ROMO1
NFS1
OPA1
STX18
TMEM169
PECR
MARCHF7
USP42
CRNKL1
CFAP61
POLR3D
SCAP
MRPL40
HIRA
LDAH
SLC24A1
INTS14
SMIM26
COMMD2
RTN4RL1
DPH1
OXA1L
USPL1
HMGB1
ATP5MC2
MIA2
POMP
ZKSCAN8
DNMT3B
HLA-B
DCTN1
SPON2
C7orf25
SLC35C2
MRPL28
PMVK
RBM28
CCNC
IER3
FLOT1
NOC4L
DDX51
WTAP
SOD2
CENPA
SGF29
ZMYND10
TMEM115
RASSF1
NPRL2
CYB561D2
NPIPB9
ADPGK
ROM1
EML3
B3GAT3
PIK3R3
RBM45
PDE11A
FUS
CD79A
ARHGEF1
RPS20
UQCC2
FLYWCH2
KDM8
ABCF1
SEC23A
MTERF1
FANCD2
NDUFAF1
LMCD1
APMAP
RANBP2
OLA1
PALB2
DCTN5
ATAD2B
B4GALNT3
BIRC2
IQCH
AAGAB
SLC30A6
CRLS1
ZNF420
ZFP90
ITPR1
POLR2J3
BCL7B
ABCA3
PLA2G10
DENR
PHKB
ITFG1
SPATA20
PSMD3
UTP11
FHL3
TATDN3
NSL1
PPP1R11
POLR1H
SDR39U1
RNF39
YWHAB
YARS1
S100PBP
PINX1
SRFBP1
MRPL3
FEM1C
TMEM222
C16orf89
ALG1
GCLC
ZSCAN9
LOC101928764
RARG
ITGB7
EVI5
ANKRD36
ZCCHC7
SRSF6
JRK
CASC3
ZC3H18
ANKRD36C
PCDH8
HEXIM1
STK17A
BCKDK
SGCA
RPL31
RPS15
UGGT1
MRPL27
EME1
POLR2C
ZACN
SRP68
GALR2
SACM1L
IST1
SNF8
DUS2
DPEP2NB
DDX28
USP31
GPS2
EIF5A
PDAP1
BUD31
TTC30B
OGDHL
LTV1
HM13
TRIM65
MRPL38
PLS1
TRIP11
GSTM4
ST3GAL2
ZNF133
NSUN5
CHEK1
RPL23
FBXL17
GNAI2
GTF2H3
EIF2B1
ZBTB45
SLC27A5
UNC45B
NLE1
DTX2
RDH14
MZT2A
STAG1
BCAR1
PDE1C
SIT1
CCDC107
ARHGEF39
ZNF84
CPQ
DOK3
DDX41
CTDP1
NOL10
FBF1
PDCD6IP
ZNF705E
UTP3
BMS1
KCTD5
GZF1
ZNF343
DNAJC25-GNG10
DNAJC25
SEC62
TAMM41
EN1
PSMD7
PET117
KAT14
OSBPL8
ZMAT2
HARS2
HARS1
FAM227B
DTWD1
C8orf37
UCHL5
RO60
GPATCH1
RFC2
CEP192
CDIP1
MTF2
KIAA0895L
EXOC3L1
E2F4
UCKL1
MANBAL
UGP2
AQR
STARD6
C18orf54
ZFAT
SLC44A1
PCK2
STXBP3
FASTKD1
PSMD8
SKIV2L
NELFE
BZW2
ANKMY2
LOC112694756
AARS2
RUNDC3A
NOL11
FANCA
CDKN2AIPNL
TIMM23
SRSF1
CTR9
KIF16B
TTC4
ANKFY1
CYB5R4
ZNF391
SMARCD2
RIPPLY2
WWOX
TBCD
DPY19L4
NUBP1
ERCC1
PGAP3
ERBB2
SNX5
MGME1
TFRC
FAM110A
CEP135
RBKS
BABAM2
DYNC2I1
KIZ
WDR74
STX5
E2F6
FANCL
ERCC5
MAP2K2
DBI
C2orf76
MRPS18C
HELQ
SPAG4
SPRYD4
RTF2
CCDC126
UBFD1
EARS2
SDCBP2
CLN5
RPGRIP1L
FTO
PPP1R36
HSPA2
PSMD9
HPD
MAGOHB
COPS7A
H1-2
THAP11
HOOK2
LTB4R2
LTB4R
CIDEB
SLC25A21
PNPT1
NCK1
MRPS5
AGGF1
BOLA2-SMG1P6
NPIPB6
LTBP4
BPHL
CAMLG
DCBLD2
TMEM217
TBC1D22B
RLF
EPHA10
TUBB3
MC1R
CNTRL
C5
MPHOSPH10
MCEE
LRP2BP
ANKRD37
C6orf136
SOST
SURF6
CEBPZ
ZNF846
APOB
DIAPH3
NBN
RPL5
IPMK
CISD1
RMDN2
TAF1C
ADAD2
TFEB
GOLGA6D
KDM3A
CABP7
SDHAF3
UNG
ALKBH2
CPNE4
PARP2
CCNB1IP1
TRAF6
RAG1
HIPK1
FDXR
UNKL
C16orf91
NKIRAS2
DNAJC7
NDUFAF6
FUT10
PLCB1
ZBTB49
LYAR
CD300LG
SPOCD1
PTGR2
TRIP4
PCLAF
CEP295
QTRT1
SUPT7L
SLC4A1AP
ADSL
NCBP2AS2
NCBP2
SLC35A3
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
KNOP1
IQCK
MTMR2
DHRS4L1
ATP7B
ALG11
ZBTB26
RABGAP1
OXTR
WDR36
ALG10
H2BC14
H2AC14
TMEM186
PMM2
DNAJA2
EXOC2
IMP4
CCDC115
ZC3H6
TAB1
HNRNPC
LCA5
GCAT
RIN1
SPHK2
GALR3
RPL18
FAM83E
BRMS1
WNT2B
SPATC1
FAAH
SLC25A51
TMEM18
NANP
TRIL
BSPRY
FAM98B
FAM133B
ARID3A
ZNF180
RBBP6
TTC33
FAM118A
RFXANK
BORCS8
TOR2A
PRKDC
MCM4
TMC7
DHX16
HIBCH
FGFBP3
SALL4
PIKFYVE
UQCC1
UBA52
PPP1R18
SNX29
TMED1
POLR3G
MBLAC2
NFATC4
MYH7B
GSS
RNASEH2C
KAT5
DRG2
EBAG9
SAMD4B
GMFG
ZNF335
C10orf88
SPNS1
LAT
ARL4D
FAF1
CDKN2C
B3GAT2
SCNN1G
IARS1
ZNF638
PFDN4
ZSCAN22
ITPA
DDRGK1
TMEM270
COX7A2L
RNF103-CHMP3
RMND5A
CLCN7
LONP1
CATSPERD
CCT2
PPP4R3B
CFAP20
STT3B
COPS4
HAUS4
GOLGA4
NPHP1
MTLN
ZSCAN26
ZKSCAN4
NKAPL
CCDC137
ZNF554
SBF2
HDAC2
ATIC
LDHA
DCAF10
RPS3A
PCMT1
DEFB132
SAR1B
KRR1
ALDH3A2
TRIM3
TIMM10B
ARFIP2
NEMP1
UBXN6
XRRA1
SPCS2
ANKRD40
VPS53
SUGP2
ARMC6
PYGB
STAT3
ODC1
HSPE1-MOB4
HSPE1
HSPD1
MDP1
CHMP4A
DCPS
AKTIP
TRAPPC6B
PNN
PPP2R3B
ARPC3
PGS1
FZR1
DOHH
DYNC2LI1
SSNA1
ANAPC2
RRM1
RHOG
MARCHF4
CA4
GOSR2
COX16
GOPC
TUBGCP3
LCLAT1
ZNF71
SLC35F5
E2F3
SMARCAL1
HIC2
YTHDC1
IFNGR1
NGDN