ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20113819 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◣ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

FRG2C
MTRNR2L1
FRG2
DUX4
PGK1
COL23A1
ZNF410
CCDC200
GTPBP6
GARS1
TFIP11
ITGB3BP
EFCAB7
SLC25A51
CCZ1B
NME1-NME2
NME1
TSN
GMFB
COX16
MRPL10
LRRC46
DNAJC9
MKRN2OS
MKRN2
INTS1
LRP6
DCP1A
MPP5
ATL2
DHX40
NBN
DCP1B
TOM1
MNAT1
MRPS23
DNAAF2
GTF2IRD2B
CCNT2
RAD51AP1
C12orf4
SDK1
ATG14
CEP192
RCOR3
WASHC5
NSMCE2
ERLIN2
NOTCH2
RPS29
ATG101
ZNF35
LRRC59
MRPL40
HIRA
TRIM37
TGFBR3
CIPC
TRUB2
COQ4
NOL11
BOLA3
ODF3L2
EXD2
WASHC2A
METTL2A
ASXL1
LRRC37A3
ADIPOR2
FITM2
UTP3
RBAK-RBAKDN
RBAK
PSMD3
ITFG2
PHB2
SUPT7L
SLC4A1AP
ZMPSTE24
INKA2
DDX20
SMN2
SMN1
FRA10AC1
NOL6
SNRPE
ZNF451
DYRK4
SRSF11
MAPK1IP1L
RNF135
APTX
DNAJA1
MRPL21
IGHMBP2
ZSCAN22
ARL8B
PPP4R3B
SMIM10L1
PRH1-TAS2R14
ADK
XKR9
LACTB2
HAGH
FAHD1
SASS6
NRAS
EIF2S1
ATP6V1D
NUDT1
MRM2
P4HA1
PEX3
ADAT2
ETNK1
ZNF322
PHF3
ATAD2
STYXL1
HIBADH
SUGCT
MPLKIP
ZNF384
LANCL2
ANGEL1
ZNF34
TPST1
GATD3B
GATD3A
RHNO1
FOXM1
CGRRF1
MFSD14A
CCDC57
SEC14L1
MIS18BP1
EIF2B5
NOLC1
DEPTOR
YBEY
MCM3AP
PGS1
RTN1
ARHGAP28
EIF2D
LRR1
DNM1L
CASC3
CCDC77
KDM5A
PPM1D
DDX1
KIFBP
PCNX4
REXO2
RTL10
GNB1L
FAM220A
STRADA
MRPS35
LRRC57
HAUS2
TEFM
PFKM
SENP1
MAD1L1
SLC39A13
HS1BP3
PSMG2
CEP76
RPS6
TRMT5
SLC38A6
NOTCH2NLB
TFAM
ERLIN1
NUF2
CHURC1-FNTB
CHURC1
NDRG1
PPIH
IQCH
AAGAB
TPR
ODR4
TOMM20L
TATDN3
NSL1
TULP3
DIXDC1
SIK2
AGL
HEXA
AFF4
STXBP3
RABL2A
SLF2
SPAST
KIAA0895
THOC6
HCFC1R1
TNFRSF12A
CDKN1B
TMED5
CCDC18
FDXACB1
C11orf1
TMEM184A
NPAS4
UTP20
CRNKL1
CFAP61
FBXO5
HTR5A
MTFR2
QTRT1
IQGAP3
SGO1
CCNG2
TRMT1
NACC1
CCNA2
FANCD2
METTL1
EEF1AKMT3
NCAPH
CYP27B1
BIRC5
RRP15
UTP25
SMYD5
SCFD2
WDR4
UNG
ALKBH2
CCDC86
SLC12A9
RRP12
FAM72C
RRM2
RABL2B
CCNB1
RAD51
C16orf71
ANKS3
WASHC2C
NAGPA
EXO1
BCAS3
CCT2
C12orf66
AURKB
KIF18B
KIF20A
BRD8
URB1
SRGAP2B
FAM72D
RBM19
ZFPL1
CDCA5
SRGAP2C
FAM72B
CDC25A
DZIP3
CIP2A
GRWD1
CKAP2L
SRGAP2
FAM72A
IPO4
CCNB2
SKA3
MRPL57
TMEM262
TTC27
NEIL3
POLR2J3
KLHL18
KIF9
VPS33A
FBXW9
DHX37
BRI3BP
MCM7
AP4M1
BLM
SLX1B
SLX1A
BOLA2B
BOLA2
LTV1
CDK7
FANCI
WDR74
SUMF1
PSME3
ESCO2
NEK2
MAD2L1
NUP214
BOLA2-SMG1P6
XKR7
XRCC2
SHCBP1
MTRNR2L2
MSH3
DHFR
NOL8
CENPP
MOK
TTK
EDC3
RAD54L
TRIP13
BRD9
CYB5R4
SKA1
KPNA2
C16orf46
GTF2H3
EIF2B1
ACOX3
TICRR
EBNA1BP2
CFAP57
CEP135
TRMT6
MCM8
DPH1
SHC1
CKS1B
ANGPTL6
TMEM186
PMM2
RTN4RL1
NAT10
MIS18A
NLE1
EXOSC5
BCKDHA
PPAN-P2RY11
PPAN
SPNS1
NBPF1
GPATCH4
BUB1B
MRPL27
EME1
VARS1
KIF15
KIAA1143
TBRG4
FAM161A
DYNC2I1
IQSEC3
NUDT15
SPATA25
POLQ
TTF2
DCAF4
ACTR6
SULT1A4
SULT1A3
NEURL2
CTSA
GTF3C4
DDX31
KIF2C
SMC2
ATP6V0D1
AGRP
LZTFL1
RNF166
NDUFAF6
RNF40
CCDC189
PIGU
TROAP
TMEM248
MTRNR2L8
POLR1B
TRIP4
KNOP1
IQCK
USP2
DLGAP5
SPCS1
GLT8D1
HMGB1
UFD1
CDC45
CCNE2
NOP16
HIGD2A
ANLN
NUDT2
KIF24
UBFD1
EARS2
LYRM4
FARS2
PMS2
AIMP2
HCFC2
GLT8D2
CTU2
MCM10
HEATR6
PRCP
DDIAS
KCTD9
CDCA2
VTA1
NMBR
NOL7
SUPV3L1
CENPW
HEATR1
UBXN11
RPP40
KIFC1
PSMD6
CPLX2
POU2F1
POLR3D
KIF23
CDK1
PLK4
DYRK1B
KLF1
POC5
WDR46
PFDN6
PBK
PNO1
SGO2
TUBD1
RPS6KB1
GBA
TMEM208
LRRC29
CDC20
DNAJC25-GNG10
DNAJC25
TAF13
PUM3
URB2
TAF5L
GCDH
ATR
CYB561D1
DUS2
DDX28
CSTF1
AURKA
COMMD9
UBE2C
ULK4
GTSE1
GPATCH3
CDC6
TFB2M
CNST
ATP6V0B
ASPM
ZNF778
DDX11
SECISBP2
PCOTH
MIPEP
CCDC115
DDX49
COPE
EPN1
MDN1
ZNF497
DDX21
TADA2B
CCDC96
RNASEH1
TRMT61A
INTS7
DTL
EIF3C
ODF2
SHQ1
MRTO4
EMC1
DIMT1
UGGT1
MAK16
TTC26
PNPT1
SLC25A26
EIF3CL
UTP4
DERPC
CHTF8
WFDC3
DNTTIP1
COG7
FAM227B
DTWD1
RDH5
BLOC1S1
ZNF331
DDX19A
IPO11
WDR62
THAP8
TDRD7
IMP4
SRPRB
IREB2
SNX16
PPP2R3B
GATB
ITGA7
WIPI1
RRS1
ADHFE1
C6orf89
BUB1
GFM1
TRMT61B
PBRM1
GNL3
HM13
TRIAP1
PUS1
UTP15
ANKRA2
RTBDN
LSM12
G6PC3
ARMC2
RBM28
LOC101928764
CREBRF
VAC14
LSM5
LAMP1
CENPS-CORT
CENPS
KNL1
RTTN
TRIP12
FBXO36
FBXL13
ARMC10
MCOLN1
TRAPPC6A
BLOC1S3
MND1
ZGRF1
LARP7
CEP55
PWP1
ZFYVE1
MRM3
GLOD4
TRMO
NOL10
PGBD5
RNF187
THOC3
DIAPH3
MFSD1
PPRC1
ZNF688
NAGK
TSFM
C5orf51
DYNLRB2
DCLRE1B
AP4B1
KAT2B
CDC25C
BRCA1
HSPA9
TTLL11
RBKS
BABAM2
DPH2
PRMT2
PINX1
THADA
MARCHF8
CEP43
KDM5B
PAXBP1
DYNLL1
SNRPD1
IARS1
ENDOV
OGDH
FARSB
KLHDC4
BBS5
NPM1
DHODH
XRN2
TWNK
MRPL43
USP32
SYNJ1
CFAP298-TCP10L
CFAP298
NKX1-1
FDX2
DDX42
CCDC47
CRBN
TOMM40
OIP5
NUSAP1
NEMP1
PRMT1
ECSIT
MRPL3
ANAPC10
ABCE1
RAD18
AVL9
STIL
QTRT2
CCDC191
TSEN54
CASKIN2
HMGB2
YARS1
S100PBP
LIN28A
CLSPN
WDR36
SSBP1
COMMD4
MAPK8IP2
CFAP410
GSN
VRK1
E2F3
GTPBP4
AEN
RCL1
POLR3F
DZANK1
INSM2
ZBTB9
SETD4
CCDC146
RUVBL1
RIOK1
CAGE1
DUS3L
CDCA8
C1orf109
NCAPG
INO80
PCNA
ZAR1L
BRCA2
VPS50
HEPACAM2
BARHL1
IFT57
PPIL2
MVK
AGFG2
CENPN
NRL
PSMD9
HPD
RFC3
TTLL4
MRM1
STK11IP
RAB14
MARS2
SUGP2
ARMC6
AP5Z1
FAM200B
NOC4L
DDX51
RTEL1
ADPRS
STMN3
ATP6V1C1
ZSWIM8
CHCHD1
NDUFS7
ARFGEF2
PISD
CBWD5
ASF1B
USP30
RPUSD4
FAM118B
MRPL4
NTAQ1
TSR3
GNPTG
ESPL1
RRP1
CAMTA1
HIPK1
TEKT2
L1CAM
CENPM
AXDND1
LARP4
FAM186A
SECISBP2L
HSPBP1
BRSK1
RPIA
C8orf33
GNL2
HSP90AB1
UBA52
MMUT
CENPQ
MPHOSPH10
MCEE
NUP107
RTF2
PARPBP
NUP37
HSDL1
DNAAF1
MKI67
TAF4B
FBXO32
CKS2
TSEN2
TDG
GMNN
GLRX5
TOMM22
CDC37
PDE8A
TMEM199
POLDIP2
TFPT
PRPF31
UTP23
RPSA
ABCF1
CPEB4
LTN1
SLC39A6
EEF1E1
ZSWIM9
LIG1
SLC37A1
GTPBP10
SKA2
PRR11
ZBTB17
UBN2
DNA2
TIPARP
TIMELESS
KLHL32
PDXDC1
ZNF593
C1orf232
VPS35
POMZP3
PARD6B
DHX33
CWC25
GAR1
RNMT
FAM210A
NUP35
FBXW8
MED20
BYSL
C12orf45
ARID3B
SOD2
NET1
SKIV2L
NELFE
MEA1
ADAT1
XPO5
POLH
MTR
OXNAD1
DPH3
H4C15
H4C14
REXO4
ADAMTS13
STAM2
SAR1B
PFDN4
PPIL1
DNAH7
WDR43
SSNA1
ANAPC2
CCDC116
TEX14
RAD51C
FAM174A
LAP3
LARS2
IQCG
SRD5A1
CBWD3
PRKAR1B
PACRGL
SDAD1
CFAP299
ASNS
PPT1
DCAF11
ADPGK
ZBTB49
LYAR
WDR61
PTRHD1
CENPO
AP3D1
TMEM231
TOR1A
COPS7B
CELSR3
LSG1
FAM187A
EFTUD2
CCDC103
FKBP3
FANCM
REXO5
ERI2
GDAP1
CFDP1
DHDDS
BRIP1
ZNF529
PC
ARHGAP11A-SCG5
ARHGAP11A
STX18
NGLY1
WDHD1
SOCS4
CLTC
ZNF202
SLC35C2
CNOT4
CNPY3
SPG21
KIF14
APPBP2
ANKRD42
METTL3
POLR1F
NCLN
TXLNA
DPP8
PALB2
DCTN5
RBM48
PEX1
DDX18
PARG
PLK1
SLC35A4
APBB3
COX14
NEU1
TTC7A
MCFD2
ATP6V1H
HSPH1
SPC25
E2F8
RSPH1
STAT1
KLHDC3
RAD9A
SF3A3
CARS1
RPF2
TOM1L2
DRC3
WDR81
EIF4H
HASPIN
CRCP
SNAPC5
SLC25A32
DCAF13
MAP3K7
WDR3
GDAP2
TCTN2
YIPF3
POLR1C
LRP2BP
ANKRD37
SPTLC1
FKBP1A
STAT3
LAMTOR5
SARS1
RAD54B
CDK5RAP1
TMEM242
EIF2B3
NOB1
EBAG9
PABPC1
NCL
DBF4B
NDUFS3
KBTBD4
RPL6
CENPF
UBIAD1
KLHL12
TMEM150A
SPATC1L
NUDCD3
ASH1L
DSCC1
RIOK3
BZW2
SPRYD4
TBL3
SLF1
KIAA0825
PEPD
THAP5
DNAJB9
BRIX1
RRP9
PARP3
ING5
NHP2
UBE3D
DOP1A
EIF1AD
BANF1
KTI12
SMC4
IFT80
INTS12
GSTCD
WDR53
STX16
PHOSPHO2
FBXO45
CCDC173
WDR27
C6orf120
RSL1D1
ANKMY2
ZHX1-C8orf76
ZHX1
CLUAP1
TTC23L
AP3M1
CEP162
SAP30
PIGW
MYO19
ZNF530
TRIT1
CMSS1
MOCS3
DPM1
APOM
TIMM44
PES1
BAG6
PTPN11
DIABLO
TFAP4
UBE2Q1
FAM214A
COG2
SETD6
MON1A
TTC4
MRPL1
AATF
NDUFAF5
ESF1
POLR3B
CACTIN
PPIL4
MYBL2