ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089498 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◣ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
NPAS4
TRIM37
PFDN4
HTR5A
TUBD1
RPS6KB1
BRIP1
DYNLRB2
TEX14
RAD51C
SLC12A9
KPNA2
ARFGEF2
APPBP2
IQGAP3
USP32
BMP7
RNFT1
RFC3
FBXO32
POLR2J3
SIKE1
SKA3
MRPL57
UNG
ALKBH2
TSR3
GNPTG
SCRT1
NCAPH
BCAS4
BARHL1
DCLRE1B
AP4B1
C12orf66
HIPK1
FANCD2
PPM1D
DZIP3
CIP2A
NCOA3
UTP20
NUDT1
MRM2
IQSEC3
TRIP13
BRD9
OAZ3
MRPL9
DSCC1
ATXN7
PPM1E
RABL2A
SLC37A1
RSPH1
L1CAM
SRGAP2C
FAM72B
SGO1
KCNH6
RRP15
XKR7
PARD6B
BCAS1
GRWD1
FAM72C
CREBRF
ZNF217
POLQ
LIX1L
SUMF1
ZNF331
SRGAP2B
FAM72D
RNF166
CTU2
SMG8
NEIL3
DHX40
C3orf14
CSTF1
AURKA
XRCC2
C16orf46
YPEL2
CKAP2L
ATXN1L
SAP30BP
RECQL5
MTFR2
ZFPL1
CDCA5
TMEM262
SMC2
CCNB1
CYB561D1
CPLX2
ESPL1
CCDC86
KIF14
TTF2
UBE2C
SKA2
PRR11
RAD54B
NET1
NOL8
CENPP
BIRC5
CRBN
INKA2
DDX20
HSF1
BOP1
SPATA25
NEURL2
CTSA
RACGAP1
TROAP
WIPI1
MCM7
AP4M1
WASHC5
NSMCE2
PRCP
DDIAS
METTL1
EEF1AKMT3
CYP27B1
FANCI
ZNF696
RAB22A
ATG101
RNF40
CCDC189
NTAQ1
INTS2
LZTFL1
CDC14B
UBE3D
DOP1A
ATG14
TRIM33
COG7
EDC3
BUB1
RMDN1
CPNE3
NOL6
TMEM249
SLC52A2
FBXL6
NUF2
RRP12
CCT2
TTLL11
GFPT1
TRMT61A
GFOD2
TTC27
HSDL1
DNAAF1
MCM10
PRELID3B
NEMP1
BICDL1
CEP128
PGBD5
SRGAP2
FAM72A
MFSD1
TTK
METTL2A
PPP1R16A
FOXH1
NAGPA
TONSL
MOK
MYBL2
C8orf33
TOP1MT
EXO1
URB1
AP3B2
PIGU
MAPK8IP2
INSM2
CENPBD1
AP4E1
TICRR
ZAR1L
BRCA2
GTPBP4
CCNA2
MED20
BYSL
TBX2
NRAS
IPO4
NUP107
RABL2B
GTF2H3
EIF2B1
DYNC2I1
KIFC1
ACOX3
RAD9A
RRM2
NME1-NME2
NME1
NHP2
LTV1
MIS18A
SPEF2
TMEM208
LRRC29
DHX37
BRI3BP
TWNK
MRPL43
POLR2K
FBXO43
TMOD3
DNAH7
PHTF1
NOMO3
ABCA5
NOMO2
SMYD5
ZHX1-C8orf76
ZHX1
RHEBL1
ACBD7
KLHDC4
WDR43
STOML1
PML
NDUFAF6
CCNE2
IARS1
VRK1
QSOX2
RECQL4
LRRC14
SLC39A4
CPSF1
EEF1E1
ZNF79
WDR4
MYL12B
SQLE
EIF2D
NDUFV1
FAM207A
THOC7
FAM227B
DTWD1
RTF2
NAA35
SPTLC1
TCF19
CCHCR1
RPP40
DEPDC1B
VAPB
KIF20A
BRD8
DLGAP5
CEP55
TUBB3
ASPM
SARS1
RAD18
METTL3
NKX1-1
ATP6V1C1
FRAT2
MON2
GTSE1
NPM1
SHCBP1
EIF3C
EIF3CL
KLHL36
ZFYVE1
PRPF18
RTKN2
HCFC2
GLT8D2
DNAJA3
ANGPTL6
PPAN-P2RY11
PPAN
POC5
GGH
ZFAND2A
TACO1
P2RY11
RRP1
PSMD4
CDC25B
MRPS23
RNF114
SNRPE
ZHX3
FEZ2
AEN
TBC1D30
GNS
NUB1
C11orf49
PRMT6
MED6
TTC26
FAM214A
OS9
BLM
TOP1
PLEKHM3
ERN1
DCAF4
PCOTH
MIPEP
FBXO5
CCNG2
ZNF688
CENPN
RFC1
PLK4
ENTPD5
BBOF1
PLCG1
TMEM186
PMM2
PUF60
MARS2
SPC25
AMIGO1
AARS2
BCAS2
HEXA
MCRS1
SLC35B1
WDR47
TCTN2
NOMO1
LOC101928764
FBXW8
CLTC
EIF2S1
ATP6V1D
SMIM5
RAD51
MOCS3
DPM1
RXYLT1
HEATR5A
DENND2C
AOPEP
ATP5MG
TDRKH
NEK11
ASTE1
TBC1D13
FANCC
GABARAPL2
URM1
ETFDH
C4orf46
WDR59
ARMC2
CLBA1
PSMA5
COMMD9
ZBTB9
PARPBP
NUP37
CKS2
CIT
CFAP69
IFT22
PLK1
EXOC3L1
E2F4
DDX11
VAC14
CCT5
ATPSCKMT
DPY19L4
IFT88
VPS13B
PSMB7
NIPSNAP3A
ATXN3
CDC25A
PRMT2
AP5Z1
VANGL1
WDR3
GDAP2
PRKAB1
TMEM231
EIF3E
CCDC150
DUS4L-BCAP29
DUS4L
COG5
SH3BGR
LCA5L
RMI2
MARCHF10
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
IPO11
ANGEL1
MTMR14
ANAPC7
ZNF367
RRM2B
CHCHD3
ROPN1L
ATP6V0D1
AGRP
YWHAG
XPO4
ACTR6
FIS1
TMEM183A
SGO2
PTRHD1
CENPO
TRMT1
NACC1
KAT2B
HGH1
FAM240C
SECISBP2
PIP4K2C
TUFT1
FARSB
AXDND1
TEDC2
GATB
TRIAP1
CFDP1
GALK1
AUH
SPNS1
PUS1
SEC22A
C16orf71
ANKS3
AGFG2
NOTCH2NLB
GRB2
CYB561
QTRT1
MRPL27
EME1
DUS2
DDX28
NBPF1
ZNF408
ARHGAP1
NBPF11
L2HGDH
DMAC2L
ATAD2
VARS1
ASF1B
C1orf54
APH1A
ATG7
ATP1A1
SPRYD3
HMGB1
RNASEH1
WDHD1
SOCS4
SAXO2
EFL1
DYRK1B
TMEM67
SNAP25
UGGT1
RIOK1
CAGE1
TSEN2
METTL2B
WDR35
ZMYND8
TAF13
ZNF530
CHD1L
PRKAB2
TPRA1
HMGCS1
USP8
MCM2
PHLPP2
PTPN1
STYXL1
MELK
PSMC2
DNAJC2
PRPF19
MBTPS1
ZNF622
SURF2
SURF1
VPS50
HEPACAM2
INIP
USP54
RBM28
SPATA33
CLCC1
CDIPT
TEX10
SENP5
RPS29
LRR1
WASHC2A
FCF1
AREL1
DCAF7
HELZ
KLHL20
CENPA
TPTE
CENPW
GOLGA5
CSRNP2
GOLGA3
RABIF
ZNF789
MET
TASP1
EXOC5
AP5M1
TRAPPC10
NUP35
TTLL5
ERG28
HEATR5B
GPATCH11
RNASEH2A
PRDX2
NGRN
TSFM
KDM5B
ATP5F1E
BBS1
FBXW2
COPS3
MDM4
NOTCH2
TBC1D31
INTS1
CSDE1
MED13
RCN2
REXO4
ADAMTS13
LSM14B
MND1
RPIA
MRPS21
RABEPK
LRPPRC
HASPIN
EBAG9
NXF1
STRIP1
ADPRS
TEKT2
SLC25A19
PSMD12
PRKAR1A
ZGPAT
ARFRP1
CDK1
C12orf45
RBM48
PEX1
VPS53
LMAN2
RMDN3
RIOK3
NME2
NOL11
METTL6
EAF1
TRIM14
GREB1
SCFD2
MTRNR2L2
MSH3
DHFR
MRPL3
RTEL1
STMN3
RHNO1
FOXM1
ADCK1
LTO1
SAMD10
PRPF6
CRNKL1
CFAP61
NARS2
HAT1
KLF10
ATR
GLE1
ZC3H18
MFSD5
DPH7
OSTM1
FSD1L
CUL2
SLC25A26
COMMD4
SPPL2A
VWA3B
DYNC1I2
C14orf28
GCN1
PDXDC1
CYP51A1
MTPN
LUZP6
MAPKAP1
PREX1
CNPY3
RAE1
PRPF39
CLCN7
CAMSAP2
CHRNA5
CCDC90B
TM2D3
MLYCD
CCDC115
IMP4
POLR2J2
FAM13B
TUT7
MXD4
RPL30
PDSS1
ZNHIT1
PLOD3
NTSR2
SNRPD1
TAMM41
TEX2
WDR74
THADA
KLHL32
ADAT1
NDUFAF4
GNAI3
NANS
KCTD13
SRD5A1
SDAD1
TRMT44
POLR2J
VPS45
SLC45A3
HM13
FDX2
CCDC146
ASNS
RIF1
RPL32
GTPBP10
REXO5
ERI2
PEPD
CHFR
GOLGA7B
RSL1D1
UBXN11
MAPK8IP3
DNAJC25-GNG10
DNAJC25
PWP1
NOP9
DHRS1
POLD3
MACROD1
RBSN
WDR70
SPG7
TMED9
NFATC2IP
WIPI2
MIGA2
NEK10
PIP4P2
MARCHF8
WDR81
ZSCAN2
CCND3
PDPR
PRIM2
WDR77
ATP5PB
SPATA2
AMZ2
EMC8
COX4I1
TCP11L1
CORO1B
C6orf89
PES1
TAF5
PWP2
LOC102724159
SAC3D1
ANKRD28
CDT1
ABTB1
MAD2L1
DNA2
NDUFS3
KBTBD4
SNAPC4
UBFD1
EARS2
DDX19A
TTLL4
SFSWAP
MAPKAPK5
AP1M1
PYCR3
FBXL13
ARMC10
PIMREG
NOTCH2NLA
PIF1
SF3B4
GDPGP1
CIB1
GAR1
MYBL1
ARL6IP1
PMPCB
ANKRD46
TCOF1
RPS16
BRD3OS
ZC3H3
TADA2B
CCDC96
SRPRB
RUVBL1
ANKRD42
GOSR2
POLL
DPCD
INTS4
SS18L1
PSMA7
PI4KB
SMARCD1
RAD54L
NUDT2
KIF24
LARP4
FAM186A
ALAD
RAB7A
ORAI2
KIF18B
NOB1
KXD1
PNPLA8
PRMT3
METTL18
C1orf112
MARS1
ARHGAP9
RNF115
POLR3C
RIDA
POP1
GAL3ST3
SF3B2
SETDB1
CS
HSPA5
NDUFB2
IFRD1
FANCE
SRRT
GSTO2
VPS33A
DIAPH3
MMUT
CENPQ
UTP23
B3GAT3
NBN
S100A13
CHTOP
XPO6
ZEB1
DYNLL2
PUM3
ZNF778
ATP6V1H
INPP5K
CNTRL
C5
ESCO2
KNOP1
IQCK
UTP4
DERPC
CHTF8
CFAP206
TMEM129
TACC3
PUS7
ZNF107
SWI5
GOLGA2
CDK5RAP2
SAR1A
SNX4
FAM174A
GPR89A
DDX46
LRFN4
DERL1
CANX
ECT2
SPAG1
KCNC1
PMS2
AIMP2
NUFIP1
GPALPP1
TF
ARFGAP1
UCHL5
RO60
TOPBP1
ETFRF1
CFAP94
RBM19
KIF11
SHOX2
RSRC1
CREB3L2
ARSG
FANCA
LEO1
MAN2B2
RIPK2
SLC16A6
RANBP6
WASHC2C
NEK2
HJURP
CENPH
CENPE
NGDN
THAP10
LRRC49
MMS22L
C11orf24
PSMB4
FBXW9
MEA1
KLHDC3
MRPL21
IGHMBP2
ATG16L1
NAA25
NSDHL
CETN2
PALLD
ARHGEF35
XRN2
QTRT2
CCDC191
ARCN1
DNAJC30
BUD23
CCDC34
GOLGA1
SPTLC2
HNRNPF
TSC2
NTHL1
DENND1B
SLC25A16
SEC13
FAM185A
RCE1
KLHL18
KIF9
BUB1B
VMP1
PTRH2
USP15
PRPF4
CDC26
RABGAP1L
PSRC1
PAM16
HOMEZ
AMBRA1
RRP36
SLC27A2
CYBA
MKI67
UBN2
SYT5
ASB8
SPEF1
PPP1R12B
CEBPB
NSUN5
TBC1D23
CCP110
TKFC
DDB1
PROSER1
NHLRC3
PRXL2C
PDZK1
CDK7
SETD4
NOC4L
DDX51
OSGEP
APEX1
GMCL1
WDR25
WARS1
MYL12A
CACYBP
ZNF749
DMXL2
ZNF510
FICD
SLC27A3
AURKB
GPATCH4
NUDT15
RTBDN
ECSIT
VPS37A
CNOT7
LIN9
TBK1
EIF3B
MTRES1
CEP112
PDPK1
NOP16
HIGD2A
PPRC1
TFPT
PRPF31
PALB2
DCTN5
TBC1D15
CFAP54
RAB5B
GNA13
ZNF138
HAPLN2
NLE1
WDR46
PFDN6
DDX42
CCDC47
INO80
PPIL1
CRELD1
RNF121
LOC100133315
PSMG1
LSS
COX19
PDIA5
SHQ1
RHBDD2