ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089506 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◣ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
NPAS4
HEATR6
PARD6B
TUBD1
RPS6KB1
PSMD6
CNOT3
ARFGEF2
IQGAP3
BRIP1
ZNF217
METTL1
EEF1AKMT3
CYP27B1
PFDN4
BCAS4
TSR3
GNPTG
USP32
MOK
DYNLRB2
UNG
ALKBH2
HIPK1
XKR7
SUMF1
TRIM37
FBXO32
SLC12A9
APPBP2
FBXO5
PPM1D
SKA3
MRPL57
TEX14
RAD51C
NCOA3
COL23A1
NAGPA
C3orf14
SMYD5
PHTF1
MCM7
AP4M1
VPS50
HEPACAM2
SFSWAP
DHX40
C8orf33
CSTF1
AURKA
C12orf66
SCRT1
CCT2
BARHL1
SAP30BP
RECQL5
EPN1
CREBRF
CRBN
RAD54B
TRIM33
UTP20
WDR4
YPEL2
TCTN2
FANCI
RUVBL1
PGBD5
ATG14
NCAPH
HSDL1
DNAAF1
HSF1
BOP1
RMDN1
CPNE3
HTR5A
SPATA25
NEURL2
CTSA
MCM10
NUP214
IQSEC3
HCFC2
GLT8D2
ATXN7
THOC7
SGO1
RNF166
CTU2
RAE1
SLC37A1
RSPH1
TROAP
ZNF331
CCNB1
ZFYVE1
TOMM70
LNP1
CPLX2
PUF60
CEP128
SMG8
NGDN
FAM214A
RRP15
CLTC
ZFYVE26
RAD51B
NCKAP5L
RAB22A
BIRC5
DDX42
CCDC47
DYRK1B
ATG101
CCNA2
POLR2J3
TRMT61A
PPM1E
CCNG2
GRWD1
TRIP13
BRD9
TTF2
ATXN1L
TTK
MAX
SLC45A3
VARS1
DYNC2I1
SPPL2A
FRG2
RNF40
CCDC189
DCLRE1B
AP4B1
FBXL3
INCENP
XRCC2
CYB561D1
KAT2B
INSM2
YIF1A
TMEM151A
SKA2
PRR11
TADA2B
CCDC96
NUDT1
MRM2
MED20
BYSL
FAM91A1
USP10
STOML1
PML
KLHDC4
SPTLC1
UBE3B
DDX11
TTLL11
TUBB3
MFSD1
GMCL1
C16orf71
ANKS3
C16orf46
AEN
NEMP1
TMEM208
LRRC29
EBAG9
EIF1AD
BANF1
CENPBD1
TMOD3
NAA25
ANGEL1
ZEB1
VRK1
L1CAM
CBLL1
NDUFAF6
CCNE2
LOC101928764
METTL3
MRPL52
WASHC5
NSMCE2
LZTFL1
NUP107
SART1
GFOD2
ANKRD46
SPAG1
RNFT1
LYSMD2
TMOD2
DUX4
ECT2
NOL8
CENPP
MAPK8IP2
DNAJA3
CHUK
SAXO2
EFL1
TDRKH
TRIM4
SLC35A1
VGF
TTC27
RRP1
SKIV2L
NELFE
HAUS7
RPP40
UBE2C
TRMT61B
MOCS3
DPM1
AUH
ARFGAP1
EDC4
PRKAR1A
ACOX3
INTS1
DHX37
BRI3BP
PPM1B
FANCD2
EXO1
RABL2A
NET1
TACO1
FRG2C
DLGAP5
DDX49
COPE
TOMM22
MEA1
KLHDC3
RHEBL1
SYVN1
TAF5
HMGCS1
ANKRD52
SLC15A4
KIFC1
RTBDN
SIKE1
CYP51A1
PTGFRN
SRGAP2C
FAM72B
HAGH
FAHD1
CCDC146
TF
TOPBP1
ATAD2
NKX1-1
STRN3
AP4S1
UTP23
PPP1R12B
EIF3H
STX16
MCCC1
FIS1
SLC35B1
SLC25A40
DBF4
ATG7
C20orf27
PDE4DIP
GSKIP
ATG2B
DDX19A
ASNS
NUB1
MKI67
TMEM150A
DSCC1
PPP1R16A
FOXH1
OSGIN2
DCAF4
ZFAND2A
POLR2J
ZHX3
FAM72C
ASPM
KIF14
AP4E1
NDUFS3
KBTBD4
ADAR
LCMT1
TCP11L2
AMZ2
PSMC1
SF3B3
COG4
GTF2H3
EIF2B1
EIF3C
EIF3CL
TWNK
MRPL43
LMAN2
TBC1D13
VIRMA
SLC25A24
CDCA4
TBX2
SGO2
THOC3
ATP6V1C1
ANAPC7
KLHL24
DUS4L-BCAP29
DUS4L
COG5
DCAF7
SRPK2
EIF2D
SUPT7L
SLC4A1AP
SNRPC
ALAD
TPTE
SRGAP2
FAM72A
GDPGP1
CIB1
ATP5MPL
MED13
TRAPPC10
TSFM
EFCAB6
PSME2
RNF31
TCF19
CCHCR1
ZC3HC1
U2SURP
LEKR1
RPGR
METTL2A
ZC3H18
GNA13
NDE1
MARF1
ARMC2
ZHX1-C8orf76
ZHX1
RHBDD2
INPP5K
NANS
VAPB
H3-3B
C8orf76
PSEN1
VANGL1
CKAP5
HOMEZ
IARS1
PDXDC1
ZNF529
RACGAP1
RFC2
NOTCH2NLA
TERF2IP
KARS1
ATP5MG
ZC3H3
H1-10
ESPL1
GLRX5
TBC1D30
GNS
PRPF18
COX19
NTNG1
PDSS1
FRAT2
URM1
CNIH4
TBC1D23
SPG7
DZIP3
CIP2A
KPNA2
MIS18A
CENPN
SPC25
TIGD5
EEF1D
CSDE1
KIF18B
NOL6
POLQ
KLF1
GCDH
RFC3
CCDC59
GLE1
FANK1
BICDL1
SLC39A4
CPSF1
FBXO33
MDM1
EEF1E1
C1orf54
APH1A
TMEM18
RSL24D1
SQLE
BMP7
LLGL2
RABL2B
SRGAP2B
FAM72D
GTPBP4
PEPD
HEATR5B
GPATCH11
NOTCH2
XPOT
DNAJC21
COPZ1
SH3BP5
IPO4
RTF2
VCPKMT
MBTPS1
RFWD3
ROPN1L
GOLGA5
SMARCA5
B3GNT2
DDX21
AGFG2
YWHAG
EXOC3L1
CCDC15
AZIN1
E2F4
COX5A
DNAL1
ITGB1
ARPP19
GPSM2
CCDC86
EDC3
CDK1
MRPS23
SSBP2
INTS8
PCNX3
MAP3K11
ATP5MF-PTCD1
ATP5MF
BFSP1
GNPNAT1
DSTN
MYL5
ATP5ME
NME1-NME2
NME1
GPATCH4
ZBTB9
NHP2
NBPF11
RMC1
PIAS3
PRIM2
KCNH6
ARHGEF5
C6orf89
TSEN2
PPIL1
MXD1
ACTR3
SLC25A26
USP30
FAAP24
CEP89
DOHH
SUB1
TMEM60
PHTF2
ENDOV
OAZ3
MRPL9
AARS2
ARL13B
GABARAPL2
NUDT3
CDK9
NDUFV1
CDC14B
LOC100289561
GFPT1
E2F5
SSR3
TBK1
MFSD14B
SMIM5
SPATA2L
RRM2
FAM227B
DTWD1
IPO11
DYNC1I2
PDAP1
BUD31
LRFN4
KLF10
FAM185A
ZFAND3
TRPM7
PDF
HAUS5
MAD1L1
ZFPL1
CDCA5
TMEM262
TIMELESS
BBS1
IDH3A
AFTPH
SWI5
GOLGA2
VIPAS39
AHSA1
PRMT6
CNIH1
CTDSP2
CMTM6
DUSP11
C2orf78
MAD2L1
MTRNR2L2
MSH3
DHFR
DUS2
DDX28
NOC4L
DDX51
OXNAD1
DPH3
CCT5
ATPSCKMT
OS9
PTPN1
NAA20
GATAD1
NDUFS6
MRPL36
HELZ
EIF1AX
WDR77
ATP5PB
NBPF12
TRIM45
MTFR2
URB1
SPATA33
SEL1L
PSMC2
DNAJC2
MPHOSPH6
DNAAF2
CORO1C
HPS3
TM9SF1
ZNF383
PSMB7
WDR37
ZNF706
IFT22
GPR146
DIP2C
QTRT1
LYRM4
FARS2
DEPDC1B
TUBA1A
ZDHHC17
SETDB1
KMT5A
MRPL38
RNF19A
SHCBP1
TICRR
PLK1
DERL1
TMED8
SAMD15
PYCR2
MMS22L
NOTCH2NLB
PSMD4
DENND2C
PCLO
HJURP
COPS3
LIN52
ALDH6A1
SEC22B
VPS13B
SELENOS
CAMKK2
METTL17
RPL30
RNF44
RRP12
REXO4
ADAMTS13
MKS1
WDR35
RPTOR
RAB1A
TP53INP1
MATN3
DNAJC25-GNG10
DNAJC25
NPM1
RFX1
UTP18
MBTD1
LINS1
ASB7
TOGARAM1
KLHL28
GMFB
CDK5RAP2
AGK
PLCL1
PTRHD1
CENPO
COMMD1
LTO1
CALCOCO2
UBR5
ZSWIM3
ACOT8
RNF139
SUMO3
NUF2
NEIL3
HSPA9
SH3BGR
LCA5L
USP14
SNF8
TARS3
UQCRC2
LMBRD2
SKP2
NAMPT
MROH1
PMEL
CDK2
NFAT5
TRIM59
RANBP9
RETREG1
FERMT2
UBXN11
INKA2
DDX20
ZSCAN2
TBC1D15
LRRC37A3
TEX10
STX4
ATP1A1
ZNF281
TRMT1
NACC1
SPNS1
TRUB2
COQ4
FBXL13
ARMC10
NRAS
TMEM129
TACC3
TM2D3
ZNF79
MDM2
TECPR1
SLC35A2
UBXN7
KAT8
ECSIT
RXYLT1
S100A13
CHTOP
RNF114
PYCR3
MRPL22
GEMIN5
POLR2J2
PITX3
GBF1
USP8
NARF
SCRIB
NOC2L
KLHL17
TXLNG
SUSD6
ACYP1
COQ5
BLM
POLR3F
DZANK1
ZAR1L
BRCA2
GAR1
CFDP1
RAB5B
SCRN3
CIR1
FANCC
ZNF212
ARSG
SLC16A6
NRBP1
TEX2
SLC31A1
FKBP15
CUL2
OXR1
STK38
PREX1
MND1
AP5Z1
VPS11
CS
RBM25
DLD
LIX1L
PRELID3B
RNF181
CYB561
AP2A1
TSKS
TRIM56
RHPN1
RAD51
CKAP2L
SRPRB
NCAPG
FKBP3
FANCM
TMED5
CCDC18
ZNF473
VRK3
HSPA5
TMEM183A
TMED10
SDE2
LSM14B
EEF2K
TADA3
ARPC4-TTLL3
ARPC4
STRIP1
C14orf28
MAP2K2
ADIPOR1
WIPI2
EHBP1
DISP1
CALB1
FBXW8
SLC25A19
TMEM249
SLC52A2
FBXL6
ELAC2
CNBP
KNOP1
IQCK
PUS1
UBE3D
DOP1A
RECQL4
LRRC14
MFSD4B
RFC1
ASCC3
CGGBP1
FAM162A
CCDC58
SPOP
ACBD3
MTG1
CBLB
ZNF654
UPF2
LGALSL
PHETA1
HELZ2
GTSE1
PCOTH
MIPEP
CFAP298-TCP10L
CFAP298
CKS2
RNMT
FAM210A
NOB1
SLC35A5
ATG3
C2CD2L
ABCF2
DPAGT1
RPL32
SPTLC2
CEP164
CELF6
FSD1L
POC1B-GALNT4
GALNT4
SNX11
SNX4
SLC27A3
PPM1H
PAWR
VAC14
STYXL1
SSNA1
ANAPC2
EIF2S1
ATP6V1D
POLR3B
POLR2K
FBXO43
NARS2
TONSL
SENP5
STRN
IMPA1
VWA3B
CSRNP2
MTCH1
PXT1
KCTD20
NEU3
DNAAF3
AURKB
PIGU
IREB2
GATB
RAD18
COX14
THBS3
MTX1
NBN
XPC
LSM3
JMJD1C
GUK1
ZBTB11
YY1AP1
DAP3
C7orf50
GPATCH2L
BDH1
HELLS
ZNF888
LDLR
SLX1B
SLX1A
BOLA2B
BOLA2
NEK2
WIPI1
WDR43
CNPY3
PDZD11
KIF4A
GAL3ST3
SF3B2
ZNF263
ING4
RC3H2
YWHAZ
DMWD
KIF5A
DCTN2
PPRC1
WDR81
L3HYPDH
JKAMP
QSOX2
LRRC47
TMEM127
CIAO1
AP3B2
TRAFD1
ENTPD5
BBOF1
CHFR
PHLPP2
SMC3
TSPAN10
NPLOC4
HIP1
PIP4P2
COMMD4
UBE2G2
PRKAB1
EIF3E
DNAJC30
BUD23
MLEC
ZNF3
LOC389831
GFUS
TMED9
CAPZA2
MCUR1
RPS6KA4
RPS6KL1
ZNF688
RPIA
XPO5
POLH
SPG21
INTS2
MTIF2
HIF1A
BAZ1B
SEC61B
ALG2
NUP153
TMEM258
FEN1
NOMO3
PIP4P1
RTKN2
NOMO2
KBTBD8
TGOLN2
LEMD3
HECTD4
RNF10
SCFD2
RAD54L
B3GNTL1
CCND3
MORN2
DHX57
NGRN
GOLGA1
NUP160
ZSCAN25
OTULIN
DNM1L
YWHAQ
RIPK2
DOT1L
CHAC1
USP49
UBE2V1
AP1S1
PPM1A
UNC119B
P2RY2
PFKP
MRPL27
EME1
TRIAP1
DNAH7
PRKAR1B
TPRN
TMEM203
NDOR1
SEC11A
ARL8B
NEK4
UMPS
TCTN1
TMEM250
TRIM25
ANKRD28
RPN1
RAB21