ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089512 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◣ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
TUBD1
RPS6KB1
BCAS3
TRIM37
IQGAP3
HEATR6
BRIP1
PFDN4
ZNF217
USP32
PARD6B
TEX14
RAD51C
BIRC5
APPBP2
NCOA3
PPM1D
FAM72C
UNG
ALKBH2
NPAS4
BCAS4
SGO1
SRGAP2B
FAM72D
BMP7
CREBRF
HIPK1
C3orf14
PHTF1
SRGAP2C
FAM72B
DYNLRB2
UTP20
CCNA2
MOK
SKA3
MRPL57
PPM1E
FANCI
TTF2
INTS1
EPN1
DZIP3
CIP2A
TICRR
NEMP1
WDR4
ARFGEF2
TRIM33
NUF2
ZNF331
RRP15
DLGAP5
RNFT1
NCAPH
RACGAP1
NET1
TBX2
XRCC2
SRGAP2
FAM72A
C12orf66
YPEL2
CCT2
METTL1
EEF1AKMT3
CYP27B1
RNF166
CTU2
MAD2L1
FBXO32
VRK1
FBXO5
TRIP13
BRD9
CCNB1
SAP30BP
RECQL5
ZEB1
EXO1
RRM2
P2RY2
TROAP
L1CAM
POLQ
QSOX2
DCAF7
ATP1A1
SIKE1
KLF10
KPNA2
SPPL2A
HSDL1
DNAAF1
PRMT6
DHX40
GABARAPL2
UFD1
CDC45
ESPL1
SKA2
PRR11
DCLRE1B
AP4B1
MCM10
ZFYVE1
UBE2C
SLC12A9
ATXN7
THOC7
NTAQ1
CDC14B
CRBN
KIF14
TRMT61A
SEC22A
HCFC2
GLT8D2
WASHC5
NSMCE2
VANGL1
CEP55
DCAF4
RAB5B
HTR5A
IPO4
CKAP2L
LYSMD2
TMOD2
ZHX3
SURF2
SURF1
FAM214A
TEX2
LTN1
TTK
KLHDC4
TPTE
TADA2B
CCDC96
NBPF1
RAB22A
SUSD6
CSTF1
AURKA
CCT5
ATPSCKMT
ZC3H18
ZNF706
DYRK1B
SUV39H1
LCMT1
RHNO1
FOXM1
FANCD2
IQSEC3
KIFC1
TTLL11
ATP5F1E
ABCA5
PDXDC1
CNOT3
EDC3
KIF18B
SPC25
SPAG1
ZFPL1
CDCA5
TMEM262
POLR2J3
ZNF367
MLYCD
SPATA2
C20orf27
ARMC2
UBE3D
DOP1A
RHEBL1
BLM
NOL8
CENPP
SERINC3
RNF114
GPR89B
MYBL1
CKS2
MYL12B
ATG101
VAPB
XPOT
CLTC
RAD51
TBC1D30
GNS
MAX
TUFT1
ZFAND2A
AP3B2
C16orf71
ANKS3
DDX49
COPE
DNAH7
MND1
RUBCN
LRFN4
TSFM
RMDN1
DHX37
BRI3BP
CPLX2
ATAD2
RFC3
INIP
SMYD5
RNASEH2A
PRDX2
PSMD12
SLC37A1
RSPH1
ZNF79
NEK2
TMEM231
NUDT1
MRM2
METTL2A
NDUFV1
ZSCAN2
SLC25A24
MYO5C
SLF2
CEP128
SCRT1
TMEM129
TACC3
GNA13
TTC27
RABL2A
MRPS23
ZAR1L
BRCA2
MOCS3
DPM1
RRP12
REXO4
ADAMTS13
RIPK2
DSCC1
SLC25A19
CPNE3
CYB561D1
GOLGA3
RFC1
GGH
OS9
TMOD3
TOLLIP
TRUB2
COQ4
HSF1
BOP1
KLHL24
FBXO33
EEF1E1
PIMREG
TF
TOPBP1
WDR37
CACYBP
BUB1B
ASPM
AP4E1
MKI67
PDE4DIP
KMT5A
TWNK
MRPL43
SMG8
ZMAT3
FIS1
PPP1R16A
FOXH1
COQ2
GPRIN1
SRPRB
PRKAR1A
ASB8
NEIL3
GTSE1
NAA25
UTP18
MBTD1
BICDL1
MACROD1
CSDE1
EIF3C
EIF3CL
TSEN2
TSR3
GNPTG
SMC2
GTPBP4
RUVBL1
SARS1
NOP9
DHRS1
DARS2
CENPL
ZDHHC24
ACTN3
STRIP1
SPEF2
DYNC2I1
SYVN1
CIT
LZTFL1
RAD51AP1
C12orf4
WDR53
FBXO45
CHD1L
PRKAB2
SPATA25
NEURL2
CTSA
ZNF778
SEL1L
RECQL4
LRRC14
AZIN1
CRNKL1
CFAP61
CCNG2
GTF2H3
EIF2B1
TMEM208
LRRC29
FAM117B
TRPM7
MTFR2
POLR2K
FBXO43
GPR89A
SPG7
ESRRA
LLGL2
GPATCH4
DMXL2
KAT2B
LRRC59
PCMTD1
SPC24
ATP6V1C1
RRP1
GFPT1
DNM1L
DPY19L4
CS
INCENP
RPL30
SCFD2
RPP40
MON2
MED13
STYXL1
WDR3
GDAP2
RAD54B
KLHL36
PTGFRN
ATG14
NOB1
TMEM183A
SMC3
HELZ
UBR3
METTL5
RPS6KB2
ACBD7
MAP11
THOC3
INKA2
DDX20
LSG1
NCKAP5L
CYB561
SNX27
SLC35D2
GRWD1
WASHC2A
PLK1
CHCHD3
AUH
SGO2
PPP1R12B
GDPGP1
CIB1
METTL6
EAF1
DNAJB6
NDUFAF6
CCNE2
PGBD5
TAMM41
TMEM249
SLC52A2
FBXL6
UBAP2L
C1orf43
PHLPP2
RABL3
GTF2E1
HSBP1
COL23A1
NOP16
HIGD2A
RAD18
HJURP
PRPF18
RETREG2
CNPPD1
FAM193B
XKR7
BARHL1
FAM200B
DIABLO
STX6
RNF40
CCDC189
RABL2B
MCM7
AP4M1
DDX11
IPO11
INSM2
MFN1
LRPPRC
RIDA
POP1
CDK5RAP2
CCZ1
RNF44
CENPE
TCP11L2
UBE2N
GNPNAT1
NTNG1
HSPA9
TC2N
CCDC86
MTHFD2
KLHDC10
VPS13B
INPP5F
DENND2C
BCAS1
RTTN
NRAS
MYBL2
NBPF11
SCRIB
URB1
KXD1
NARS2
COA8
BAG5
PRPF19
MTRR
FASTKD3
SF3B4
TSEN54
CASKIN2
HEATR5A
MCRS1
NXF1
TBK1
DYNLL2
SLC22A15
WASHC2C
LOC101928764
ENDOV
OAZ3
MRPL9
CDK5RAP3
ALAD
SPOP
RTKN2
ARFGAP1
IDH3A
PHKG2
TTC8
RTF2
CFDP1
RBM8A
SLC25A16
PIP4K2C
BZW1
GIT2
ANKRD13A
PRXL2C
LTV1
CDK1
NGDN
LSS
DKC1
SPTAN1
MYL12A
PTTG1IP
PPM1H
TGFBR1
HMGB1
KNL1
GMCL1
ADCK1
GLE1
OSGIN2
MRPL52
WIPI2
PREX1
MRPL3
INTS2
CENPBD1
TPCN1
GPSM2
IQCD
PLD1
DDX21
SLC25A26
UTP23
CENPH
CCDC88A
SQLE
EIF3B
CDT1
SLC27A2
DYNC1H1
CPEB4
PRKAB1
FANK1
CCDC150
PDP1
SSR2
VARS1
ZNF688
DNA2
TMEM120B
CYP51A1
GTF3C5
ERCC3
PRKCA
RIOK1
CAGE1
GLRX5
FBXW2
DOLPP1
GLG1
SHCBP1
BRMS1
B4GAT1
KIF11
SNAPC4
SCYL2
DEPDC4
ZBTB34
TPRN
TMEM203
NDOR1
CHUK
AKAP1
ZER1
RAD54L
HAGH
FAHD1
RIOK3
STX16
GFOD2
CALCOCO1
PWP2
LOC102724159
PSEN2
ATP5MG
RMI2
RAE1
CCNE1
TRAIP
ETFDH
C4orf46
RAB7A
CTDSP2
ADCK2
SLX1B
SLX1A
BOLA2B
BOLA2
POC5
DUS2
DDX28
FAM227B
DTWD1
ZSWIM9
LIG1
WDR77
ATP5PB
TCTEX1D2
TUBA1A
HGH1
TMEM260
TCTN2
LMAN2
FAM185A
WDR47
PTGES2
MTMR14
STYX
GINS2
UTP4
DERPC
CHTF8
CCDC146
VMP1
PTRH2
SMARCC1
FAM24B
C11orf24
H1-10
MTRNR2L2
MSH3
DHFR
SHC1
CKS1B
MED20
BYSL
SKIV2L
NELFE
TOP1
MXD1
MBTPS1
ZNF148
ARSG
NEPRO
SLC25A13
TRAFD1
TADA3
ARPC4-TTLL3
ARPC4
SLC16A6
PITRM1
METTL17
AKT2
MTMR12
FAM240C
NUP214
PBK
DNAJA3
SFSWAP
CLCC1
NOTCH2NLA
DEPDC1B
CHERP
NOTCH2
POLR2J2
STK10
HPRT1
KIF20A
BRD8
CENPN
PRPF38A
ORC1
SEC22B
ANKRD46
RPUSD1
CHTF18
CALU
CNOT2
EXOC6
USP10
BCAS2
ZMYND8
ABTB1
ASMT
MARVELD3
MAPK8IP2
SEC14L1
FBXW8
POC1A
ATG7
SCRN3
CIR1
UNKL
SEMA4B
LIX1L
PRELID3B
UBR5
CSRNP2
OXR1
GPD1L
FAM91A1
CYB5R1
PI4KB
C16orf46
LSM5
AVL9
SLC39A6
PDSS1
NBPF12
PLEKHM3
KIF3A
MFSD14B
RPS23
ATP6AP1L
BRPF1
IKBKB
SULF2
MCOLN1
TIMELESS
AP3S2
RRM2B
ZNF696
NOMO3
NOMO2
NOMO1
SLC45A3
TRIM25
TENT5C
NBPF15
TIMM50
MAP3K3
CAMSAP2
MROH1
NDUFS6
MRPL36
SAR1A
LATS2
NAGPA
SLC35C2
STAT1
DSTYK
FBXL3
FBXO48
APLF
COG3
UBXN1
XPO4
PPP2R5E
UBALD2
CERS5
PLCL1
SIRT7
TAF4B
NME2
FAM207A
ATXN1L
TTC13
NUTF2
CENPT
THAP11
FAHD2A
STRADA
STK3
CSTB
RBBP8NL
SKA1
POLR1B
SHQ1
PCNX3
MAP3K11
FUBP3
ARPP19
CLBA1
POLD1
CREBBP
NUP107
EBAG9
NKIRAS1
NR1D2
CD55
SART1
NUDCD1
RNASEH2C
ZNF507
DECR1
TXLNG
PELI3
PI4K2A
FAM193A
RMND5B
PDPK1
CPLX1
KIF2C
PIGU
PC
SPEF1
CFAP69
ARF3
TMEM65
RNF8
SPATA7
EBNA1BP2
CFAP57
UTP15
ANKRA2
IQCG
LMLN
TACO1
CRELD1
FPGS
HAUS7
C5orf34
TM2D3
BLOC1S2
GMFB
ZDHHC23
USP2
FAM174A
E2F8
TCOF1
PDCD2L
RBSN
FIGNL1
AMZ2
BIN3
CHFR
EIF2B2
ARNT
CDCA4
ANGPTL6
PPAN-P2RY11
PPAN
ZBTB45
DUT
RBBP5
ANAPC5
PDZD11
KIF4A
ECT2
EDC4
CKAP5
EIF4ENIF1
P2RY11
SGK3
TOP2B
TRIM28
RYBP
UBXN11
BUB1
PSMD7
NOL11
COX19
EEF2K
FAM3C
ZNF789
EID2B
S100A11
OVOL2
ATR
COMMD4
GSN
RAB14
TMEM18
TMED10
MMS22L
PSME2
RNF31
PRIM2
RNF19A
PSMB4
GAPVD1
APPL2
SH3BP5
MPHOSPH8
SCARB1
GPR135
METRNL
KCND3
FRG2
ODF2
VPS50
HEPACAM2
RPIA
POLD3
PRKDC
MCM4
CENPA
TUBB3
MED27
MEF2D
UQCC3
LBHD1
SUMF1
PLK4
SNRPE
DIMT1
DDX42
CCDC47
ASF1B
NUP35
ADAT1
CNPY3
ZHX1-C8orf76
ZHX1
POLR2J
ZZEF1
CYB5D2
RIF1
NUB1
RRAGC
MKRN1
NOTCH2NLB
TUT7
MGRN1
STRN3
AP4S1
SCAI
CACNG4
NKX1-1
MEA1
FKBP3
FANCM
KLHDC3
TOM1L2
DRC3
SH3BGR
LCA5L
HSPA5
PSMA5
SYT5
DNMT1
MAN1B1
C7orf50
SWI5
GOLGA2
CBLB
PRPF38B
CLPTM1L
GALK1
UNC79
BTBD7
ARHGEF5
LARP4
FAM186A
DNAJC9
MRPS21
KANSL2
WASHC4
FANCC
CDIPT
INVS
ERP44
RABGAP1L
ENTPD5
BBOF1
GAN
SUB1
PRTG
TTC26
WIPI1
FARSB
HROB
TASP1
SSBP2
SEC61B
ALG2
ARL8B
SNF8
C12orf73
PKMYT1
PTBP3
YPEL5
MARCHF8
CAMTA1
SLC25A32
DCAF13
PABPC1
SLC7A5
C1orf54
APH1A
TTLL5
ERG28
NBN
E2F5
ANKRD28
PA2G4
CTTN
H3-3B
KIF27
GXYLT1
TRPC1
RETREG1
CTSD
CYP24A1
MIS18A
PSMD9
HPD
ZNF408
ARHGAP1
INPP5K
ERAL1
NAA35