ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2188691 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◣ SRX2188691: U2OS

◢ BRCA1: STRING

ANKRD26
RAB35
N6AMT1
ADI1
PHF12
FAM220A
STK32C
LRRC27
SPRTN
EXOC8
NBEAL2
CCDC12
FAM222B
SAMHD1
TUBD1
RPS6KB1
SDHA
CCDC127
SUGP2
ARMC6
DAGLB
SMARCA4
DNAJA3
CORO7-PAM16
CORO7
ENTPD6
WIPI2
ZNF12
PGP
MLST8
BRICD5
CASKIN1
XRCC5
APOLD1
SRSF10
ACTN4
KHDRBS1
POLA2
CENPBD1
CXorf38
POU2F1
MYPOP
EHMT1
NBPF1
SAYSD1
PPP1CB
SLC2A11
BNIP3
TOLLIP
ABCF3
MCRS1
PPP6R1
ZC3H8
C10orf88
EID2B
EID2
RAD21
XPO5
POLH
GPI
MTCH2
PRRT2
MAZ
PAGR1
MVP
C19orf81
FAM122A
NELFCD
LOC100287896
LIPT2
ZBTB17
PTK2
FAM98A
VPS26B
NCAPD3
NAGK
HNRNPL
CCNQ
MIS18A
ABCA3
ITPA
DDRGK1
OARD1
NFYA
SMIM14
POLR2J2
NDEL1
PRMT2
PATL1
THAP7
RPP38
ACBD7
PITPNB
SLX4
RANBP3
RABIF
FAM71E1
EMC10
SARS1
VDAC3
SYNGR4
PDRG1
ALKBH5
HNRNPH1
SPDYE6
LOC100289561
FUT8
FAM24B
FXYD3
CBX5
HNRNPA1
PRR30
PREB
BANP
SUMF2
YEATS4
FAM120B
ZNF576
IRGQ
GTF3A
LONP1
CATSPERD
RAB18
TMEM141
CCDC183
HP1BP3
NAPG
AMZ2
CCNT2
RTL10
GNB1L
SMIM11B
SMIM11A
NPRL3
RBAK-RBAKDN
RBAK
SMG9
TMED4
DDX56
PRELID3B
CDC7
KDM8
CRTC1
RCBTB2
THAP5
DNAJB9
RSRP1
UAP1L1
MAN1B1
HINT1
ZNF638
TK2
CKLF-CMTM1
CKLF
TMEM104
NAT9
C6orf136
MTRNR2L8
DPF2
MRPL45
ZNF664-RFLNA
ZNF664
CCDC92
PPP2CA
CHD1
RBM17
ESRRA
CATSPERZ
SYS1
XPO7
DOK2
SPPL2B
LSM7
SPECC1L
RALGAPB
TRIM37
VPS13C
C2CD4A
VPS13A
WDR13
RAX2
MRPL54
APBA3
COL23A1
NBPF3
SELENOI
ADGRF3
USP21
PPOX
UFC1
SHBG
FXR2
SPOP
MOK
UCN2
PFKFB4
ALG8
GDF5
CEP250
CHMP7
ATP6V0E2
GMCL1
KCNN1
FADD
TMX1
CCDC93
UNG
ALKBH2
DLGAP4
MORF4L1
MAP2K7
TDP2
ACOT13
TMEM250
MTHFSD
GPAA1
EXOSC4
POLR2J
SRRM1
TLX2
PCGF1
LBX2
CPLANE2
SAFB
SAFB2
TMEM63B
MRPL14
CDC34
GRB2
CAPZA2
RPL36
MICOS13
HSD11B1L
RNF149
LUC7L2
FMC1-LUC7L2
FMC1
CBY3
TBC1D5
NAPB
AP3B1
PAPSS1
SOD2
ACAT2
IPMK
CISD1
ZBTB14
PPP2R3B
USP10
ZNF526
DEDD2
SH3YL1
ACP1
AMACR
CCT5
ATPSCKMT
CDC20
ZNF583
MSL2
MRS2
TMEM43
CHCHD4
ERCC6
PIGF
CRIPT
C8orf48
SPEN
PPME1
C2CD3
GATD3B
GATD3A
FIP1L1
ZMYM4
FAM227A
CBY1
NUP50
ZNF652
MKNK2
TAX1BP3
EMC6
DYRK1B
DSN1
RAD23B
DNA2
WWP2
NOB1
SRSF1
MINK1
NFXL1
PRR14
FBRS
HBS1L
EPS15L1
C15orf40
ENDOV
NDUFA8
MORN5
OSCAR
NDUFA3
SRD5A1
RRP1
PRPF39
INTS7
DTL
EID1
IFNAR1
VAPB
PKD2L2
HSF1
BOP1
WWP1
PCSK1N
ERAS
ZNF329
PARD6B
DYNC2I1
TFAP2A
TMEM139
CASP2
MTRNR2L2
MSH3
DHFR
MYCBP
GJA9
TIGD6
HMGXB3
IQCC
DCDC2B
CCDC28B
WDR4
SPDYE7P
POM121
MLH3
DHDDS
THOC3
RBM7
C11orf71
MRNIP
MAP1LC3B
FBXO31
AP1G2
TIGD1
EIF4E2
INTS13
FGFR1OP2
OPA1
ASCC1
ANAPC16
PINK1
POLR2J3
ARRDC3
RSL1D1
ZFP69B
SNRNP70
C11orf80
NUP107
CRB1
TRMO
TSEN2
PLA2G12A
THAP12
GVQW3
TBK1
PVR
SPG7
C1orf74
UBL4A
LAGE3
ARFGAP3
CC2D1A
C19orf57
PLEKHA8
TMED3
MAPKAP1
TIA1
PCYOX1
GPATCH8
MRPS18C
HELQ
ELP6
GAA
USO1
PGRMC2
TMEM120B
ARPC2
CNOT4
CANT1
ANO10
ABHD5
FAM200B
EIF2S1
ATP6V1D
PDXDC1
HERC4
KIFAP3
NRF1
CCSER2
ALAS1
MROH1
HGH1
PPP5C
PDCL3
CIPC
C2orf74
NUDCD2
HMMR
CLIP4
CCS
CCDC87
HEATR3
CAPN7
GFPT1
CC2D1B
ROPN1L
NDUFS6
MRPL36
SNAP47
JMJD4
TMEM70
ELOC
RNF130
CLASP1
MRPL24
HDGF
DLD
CBLL1
RDM1
ATXN7L2
HINFP
GZF1
SPATA20
EPN3
ERGIC3
TIGD5
EEF1D
ZDHHC12
TOPORS
SMIM27
CENPS-CORT
CENPS
RIOK2
TRIAP1
COX6A1
DFFB
CEP104
LRFN3
COP1
MTG1
BRD2
ZNF428
SRRM5
TMEM63A
LEFTY1
ZNF768
ZNF747
STX2
TSPAN10
NPLOC4
TAF1B
DCTN6
PTPN4
TRAPPC9
UROS
BCCIP
LRPAP1
STIM2
SPTBN4
ZNF182
SPACA5B
SPACA5
WDR43
CABIN1
XRCC2
CACYBP
PALB2
DCTN5
CLN5
ATP5PO
RPS29
HEXIM1
RELA
UQCR11
MMAA
PPA1
DHX34
C5AR2
MOCS2
GPS2
EIF5A
UPF1
ESCO1
MRPL55
MAST2
HSD17B10
PIAS4
PCIF1
MAMSTR
PTPN2
SCAF11
SPC24
ZHX3
DHX9
AGFG2
E4F1
TRMT61B
ZC3H14
PTPN21
ARF4
WRNIP1
MYLK4
TMEM69
GPBP1L1
TCF25
POP7
TRNAU1AP
ZNF251
GCLC
P3H1
STX1A
ZC2HC1C
ACYP1
RNF19B
SZRD1
SPATA4
YIPF2
TIMM29
SPAST
DCAF8
MSRA
TTC37
ARSK
XRCC1
PINLYP
SPDYE14
SPDYE10P
ATP5MC2
APC
GNPTAB
FNBP4
STXBP1
LINS1
ASB7
SPATS2
RPRD2
ADAM10
APBB2
TOMM20
IL4I1
NUP62
ATF5
BIRC6
PRDM4
BTF3
TMEM211
ZMYND12
PPCS
CCDC30
CSNK1A1
ASB8
CYRIB
POFUT2
KIF3A
CCNI2
KANK3
TRAM1
TMEM170B
MRTFB
MYCBP2
HSP90AA1
ZFAND3
TCTEX1D2
C15orf61
BSN
BLOC1S2
CYTH1
CCDC106
U2AF2
TENT4A
CDC42EP4
SEH1L
ZNHIT1
PLOD3
FITM2
PRKDC
MCM4
PGAM1
MBD3
MIDN
CBARP
ATP5F1D
SREBF1
LYPLA1
DTX2
MRFAP1L1
BLOC1S4
NR1D1
KIF6
PCMTD2
FBXO48
APLF
THOP1
SGTA
PTTG1IP
FIS1
EIF2S2
SRPRB
TBC1D25
OTULIN
E2F6
PSMA2
MRPL32
CTPS1
TRIT1
NANP
SIRT5
GNPDA2
TOR1AIP2
TOR1AIP1
TMEM109
PRPF19
GABARAP
PHF23
DVL2
EIF2AK1
TIMM21
FBXO15
KIAA1522
KATNIP
GTF3C1
MRPL35
IMMT
ANAPC11
ALYREF
SDHAF3
DUX4
TXNL1
TRMT2A
RANBP1
SNURF
SNRPN
FZR1
DOHH
TSACC
CCT3
PDCD6IP
DUSP18
PUM2
UPF2
INTS2
SMARCC1
CYCS
EIF4G1
FBXO46
MEIOSIN
DISP2
PHGR1
UIMC1
FRG2
POLR3B
PARD6A
C16orf86
ACD
SDCBP
ZFAND2A
CIC
PTBP1
BCL10
TMEM182
MFSD9
RNF38
ZMYM1
NADK
NPM1
UQCC1
PARK7
COX18
SCML1
CENPI
PTCD3
POLR1A
POMGNT2
SLC30A4
ZNF248
FLYWCH2
SLC35B3
IPP
ERICH2
RAB1A
RSPH3
ECM1
USP28
SMARCB1
CEP295
TCTA
RHOA
NIPA2
TPM1
MYL5
ATP5ME
TBC1D7-LOC100130357
TBC1D7
TSGA10
C2orf15
JMJD1C
REEP3
WDR18
ZNF34
RPL8
ZNF517
TMX3
CCDC102B
LIG4
ABHD13
HSDL2
ATOH7
PPAT
PAICS
PAIP2
CDT1
APRT
MEAF6
LRBA
PDCD2L
TMEM50A
MPHOSPH6
ARPC1A
OSER1
NDUFA6
C17orf97
COMMD8
UTP18
MBTD1
C4orf3
CASK
AARSD1
LPCAT3
LHX9
C1orf53
GDPD1
PCBP1
DNAJC28
NAA50
ATP6V1A
ASNSD1
ASDURF
ING1
CARS2
AP2S1
ARHGAP35
IPO9
SSH1
PPAN-P2RY11
PPAN
ANGPTL6
SHFL
CFDP1
KDM3A
TSSC4
TYMP
SCO2
ODF3B
ZBTB43
MTFMT
GABRB1
UBE2M
CHMP2A
LRRC42
HSPB11
RNF216
TERF2IP
KARS1
TMEM175
GAK
MEGF8
CHORDC1
TRAM1L1
TRIP6
SRRT
SLC49A4
HSPBAP1
AKAP1
MRPL17
DAD1
ABHD4
MBD1
CXXC1
SNRPB2
FOXA3
SYMPK
ZNF331
B4GALT5
SEC61G
ABRAXAS1
INO80C
SELENOT
TGDS
GPR180
DOLPP1
GOLGA1
RFXANK
BORCS8
SMIM4
NT5DC2
SCAPER
IQCE
BRAT1
PBLD
HNRNPH3
SPDL1
CLPTM1L
NDUFS3
KBTBD4
FAM180B
S100A13
S100A1
CHTOP
SS18L2
SEC22C
CNP
CEP20
KDM2A
ZBTB4
SLC35G6
POLR2A
MTHFD1
FOCAD
RTN3
ATL3
UGGT2
ZNF281
TRMT11
EXOSC10
PAPOLA
OCIAD1
ZNF473
VRK3
GABPB1
GEMIN2
TMEM127
CIAO1
PYGL
TMEM254
SYP
TAOK2
WDR5B
ZDHHC16
EXOSC1
FBXO5
PPP1R27
MCRIP1
CBFB
DNMT1
PAM16
OSTF1
NMRK1
GTPBP10
RAB8A
AP1M1
ZNF217
CBX7
SNRK
COG6
DUSP22
PCLO
CD9
KCTD13
YY1AP1
DAP3
FXN
RBBP8
NSMCE3
HEATR5B
GPATCH11
FKBP1A
PDCD5
CCNI
UBE2V1
ZNF740
CSAD
FAM219B
BMS1
CASTOR2
AURKB
BORCS6
TMBIM6
SEL1L2
MACROD2
CCNJL
TMEM170A
ASXL2
SPATA1
GNG5
KCNC3
SLC30A5
RPP14
HTD2
PDIA5
BCL7B
PPP6C
SCGB1C2
WAS
ROCK1
SPICE1
IRF2BPL
TMX4
PTGR2
SMAP2
HASPIN
PITHD1
ERLIN1
DNAJC5
SEC24C
MTCL1
CIAO3
SIRT6
ANKRD24
AKTIP
DST
TRIM23
TRAPPC13
SHLD3
KBTBD2
ING2
GTPBP8
ACTB
SEC14L1
SLC39A4
CPSF1
FAM234B
WDR45
GXYLT1
GPBP1
SPRYD7
USP22
FANCD2OS
BRK1
SCAP
AUH
TRMT112
PRDX5
ZFR
CARNMT1
UBN2
LOC100421372
HSPA14
CDNF
SLC35D1
EZH1
LSM1
BAG4
VASH1
AVEN
NAA40
MED4
ARF1
SLTM
ATG7
FAM104A
C17orf80
TBCCD1
DNAJB11
EXOSC5
BCKDHA
PRKAR2A
ZNF74
SAP30
CALR
RAD23A
C8orf37
ZKSCAN2
CFAP206
BBS2
SNX11
CBX1
TMED9
B4GALT7
GTPBP6
COQ3
STARD6
C18orf54
PGAP1
SBF2
EIF2D
TMEM101
RBM14-RBM4
RBM14
TMEM115
NPRL2
CYB561D2
KCTD16
YIPF5
MPP6
ARMC7
B9D1
KANSL1
RAB23
SEC16A
C9orf163
EXOSC2
CHMP3