ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359987 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◣ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

PTPRN2
MAMDC2
ISG15
AGRN
COL23A1
LOC102724770
DGCR6
ART1
DUX4
MTRNR2L8
SPRTN
EXOC8
PHF12
SRSF10
N6AMT1
DNAJA3
CORO7-PAM16
CORO7
ANKRD26
RAB35
NBEAL2
CCDC12
ADI1
PGP
SUGP2
ARMC6
MLST8
BRICD5
LUC7L2
SMARCA4
VDAC3
XRCC5
CASKIN1
MTRNR2L2
MSH3
DHFR
POU2F1
STK32C
LRRC27
C10orf88
FAM222B
PRRT2
MAZ
PAGR1
BANP
TUBD1
RPS6KB1
PDRG1
FAM220A
MVP
KHDRBS1
PRMT2
ENTPD6
APOLD1
POLA2
MRPL55
SDHA
CCDC127
CXorf38
RAD21
FAM98A
RANBP3
ACTN4
BNIP3
LONP1
CATSPERD
SNAP47
JMJD4
NBPF1
FAM122A
SAYSD1
VPS26B
NCAPD3
XPO5
POLH
HINT1
ZC3H8
FAM200B
THAP7
SYNGR4
TOLLIP
MCRS1
CENPBD1
PTPN4
NPRL3
PPP6R1
ITPA
ATP6V0E2
SAMHD1
DDRGK1
EID2B
EID2
MAP2K2
RPP38
ACBD7
GTF3A
ZBTB17
ABCF3
EHMT1
DAGLB
INTS13
FGFR1OP2
RABIF
LAMP1
TMEM250
FAM24B
UAP1L1
MAN1B1
ABCA3
HNRNPH1
CHMP7
C1orf74
FMC1-LUC7L2
FMC1
RAX2
MRPL54
APBA3
MRPS18C
HELQ
TK2
CKLF-CMTM1
CKLF
SPPL2B
LSM7
MTHFSD
CBX5
RAB18
USP21
MYPOP
ZNF12
WIPI2
HNRNPA1
HNRNPL
FAM71E1
EMC10
PRR30
PREB
NAGK
PPOX
NDEL1
TMED4
DDX56
MIS18A
IFNAR1
TMEM209
SSMEM1
NANP
SH3YL1
ACP1
XRCC2
SMIM11B
SMIM11A
PBLD
HNRNPH3
RRP1
HASPIN
ALKBH5
LOC100287896
LIPT2
MOK
SLC2A11
SUMF2
DENR
KDM8
TRIM37
CRTC1
AKAP1
PITPNB
PATL1
ERCC6L2
TRIAP1
COX6A1
SOD2
RCBTB2
C19orf81
CBY3
UFC1
PPP1CB
WWP2
PPP2R3B
NOB1
MAP2K7
CDC7
PPP2CA
YEATS4
RPL36
MICOS13
HSD11B1L
FADD
CDC5L
NPM1
DCAF8
SELENOI
ADGRF3
SLX4
MRPL45
SSNA1
ANAPC2
WDR4
STYXL1
NELFCD
SLC25A11
RNF167
PFN1
CACYBP
SUPT5H
RPS16
SPDYE6
LOC100289561
PTK2
CCNT2
SPDL1
SLC39A7
RXRB
RING1
HSD17B8
STXBP4
COX11
TMEM141
CCDC183
GP1BA
SS18L2
SEC22C
NUDT1
MRM2
RPS2
RNF151
CDC20
CHD1
MTRNR2L1
SKA3
MRPL57
OPA1
THAP11
ZNF576
IRGQ
SRSF1
SAFB
SAFB2
OARD1
NFYA
COL11A2
RPL10A
NOP14
GRK4
GPI
MTCH2
FXYD3
RPS11
RPL13A
TBL3
SLC35E2A
MAD1L1
MARCHF7
SRCAP
LOC730183
BTBD10
TIPIN
C6orf89
PUF60
RBM17
NME1-NME2
NME1
TRMO
ASNSD1
ASDURF
TXNL1
RTL10
GNB1L
SNRNP70
MRPL24
HDGF
ZZZ3
TMEM18
UNG
ALKBH2
POLR2J3
NPAS4
EIF2D
FUT8
RPL12
LRSAM1
FAM120B
NUP107
SMG9
COPB2
VPS13A
TRMT61B
RSRP1
THOP1
SGTA
AMZ2
CCDC86
DYNC2I1
TUBGCP5
NUP214
XPC
LSM3
MRFAP1L1
BLOC1S4
ZNF583
CCT5
ATPSCKMT
TAS1R1
NOL9
PRDX1
NOC4L
DDX51
NUP50
COQ9
CIAPIN1
HP1BP3
RPS19
MPC2
DCAF6
MED1
CDK12
COASY
MSL2
CALR
ICMT
HES3
NCAPG
SPOP
RALGAPB
DHDDS
QRICH1
TOMM20
RAD23A
PPP4R3B
TMEM79
SMG5
GMCL1
NCOA4
ANKFY1
CWC25
CCNC
TOR1AIP2
TOR1AIP1
ARF3
OSCAR
NDUFA3
MAP3K7CL
CCT8
RPS7
C5orf24
TBC1D5
RPS6
TDP2
ACOT13
GRB2
MLX
THOC3
SLC15A4
LRFN3
SCAMP5
GH1
CSHL1
NAA35
THAP5
DNAJB9
MAGOHB
SLC35E2B
TAOK1
DPF2
EEF1AKMT1
SRRM1
PARK7
ECHS1
ASXL1
PSMD5
POP7
TMCO1
MAP1LC3B
FBXO31
UHRF2
SARS1
JOSD2
ASPDH
GDF5
CEP250
RPL17-C18orf32
RPL17
HSD17B1
C18orf32
GPAM
CCNQ
INTS7
DTL
TMEM139
CASP2
ERGIC2
CRB1
TAX1BP3
EMC6
WDR73
NMB
ZFP91
LPXN
ZNF48
GPBP1
GAS8
RBM42
NOL11
PPME1
C2CD3
AKAP11
SPDYE7P
POM121
HAUS5
SLC26A8
MAPK14
ACAT2
ZBTB2
TTC32
CAPZA2
AP3B1
GPATCH3
SMIM14
MAK16
RFC5
NAA38
SH3GL1
CHAF1A
ARFGAP3
COP1
PURA
TRIP6
SRRT
CAND1
UBR3
RPS28
NDUFA7
METTL5
NOXO1
LTV1
RBAK-RBAKDN
RBAK
ZNF286A
MRS2
AURKAIP1
NAPG
TOPORS
SMIM27
DIDO1
SNX5
MGME1
TIGD1
EIF4E2
FAM135A
TMEM88
CYB5D1
C6orf136
FSIP1
IPMK
CISD1
ZNF771
GID8
KAZALD1
DNAJC27
ATF2
SMIM10L1
PRH1-TAS2R14
DBNDD1
CCDC106
PRR14
FBRS
VMAC
NKTR
NDUFA11
PDXDC1
UBE2D3
DBR1
RPL27A
DARS1
WDR13
DYRK1B
MRM3
GLOD4
KIF5C
RNF149
HSPA4
ETFA
CEP350
AHCTF1
STRIP1
CFAP70
EHD1
IREB2
TMEM70
ELOC
NDUFA8
MORN5
U2AF2
USP10
CDC34
SHBG
FXR2
STS
PUDP
MMS22L
UTP25
XPO7
DOK2
TTC23
LRRC28
NUF2
PAPSS1
GPS2
EIF5A
SMARCC1
UBE2M
CHMP2A
SPEGNB
GMPPA
SCAF11
POLDIP3
RAB33B
ZMYM4
SIRT5
PALB2
HSF1
DCTN5
BOP1
EPS15L1
ATXN7L2
C8orf48
RBM15
EIF4A3
SRD5A1
USO1
PEX12
AP2B1
PSMB2
HERC1
PRELID3B
MATR3
HINFP
EIF5
PEMT
PMF1-BGLAP
PMF1
ELOVL1
UROS
BCCIP
CYCS
ZNF638
NOP16
HIGD2A
RSL1D1
MINK1
SHPRH
ZNF664-RFLNA
ZNF664
CCDC92
CC2D1A
C19orf57
WDR18
MAPKAPK5
KIFAP3
ESRRA
CATSPERZ
TFB2M
CNST
TMEM104
NAT9
MTG1
ARPC2
TIA1
PCYOX1
RPS15
SYS1
SRP19
MYL5
ATP5ME
FAM76A
KIAA1191
FASTKD2
ARL10
SUGP1
MAU2
MAP3K7
ZBTB45
SCAND1
ATAD3A
HBS1L
DUSP15
CSDE1
SEC62
EFHC1
NFYC
GZF1
PXMP2
POLE
AASDH
FZR1
GTF2H3
EIF2B1
DFFB
CEP104
PRKDC
MCM4
UTP18
MBTD1
ZBTB6
RC3H2
TMEM63B
MRPL14
VMP1
PTRH2
DOHH
TIGD6
HMGXB3
MBTPS1
MRPS7
MIF4GD
GGA3
EID1
DRG2
SURF2
SURF1
RPL7A
MED22
TMEM43
MICOS10-NBL1
MICOS10
CHCHD4
IPO11
DIMT1
WDR43
CBWD5
TMEM109
PRPF19
KCNN1
GATD3B
GATD3A
HSBP1
SLC25A4
SEPTIN7
MKNK2
RCC1
NUP153
MRPL21
IGHMBP2
TMEM63A
LEFTY1
MAPKAP1
TENT4A
MORF4L1
NUDCD2
HMMR
CNP
PRDM4
LANCL2
SPDYE16
DSN1
ZNF34
RPL8
SLC25A10
MRPL12
CUL3
CCDC93
PUM2
ADAT1
ZCCHC14
MRNIP
SF1
WRNIP1
MYLK4
C15orf40
AURKB
ATF7-NPFF
ATF7
FRG2C
DHX37
BRI3BP
CD2AP
DLGAP4
CELSR3
NBPF3
TMX1
ZNF346
GABARAP
TMED9
B4GALT7
KIF5A
DCTN2
POLR2J
ZNF517
ALG8
ING1
CARS2
GOLGA1
RFX1
NR1D1
SMG7
THAP1
FIP1L1
WDR27
C6orf120
THADA
GLCE
KIN
ATP5F1C
SPAG16
BORCS6
TFAP2A
CIAO3
IKZF5
ACADSB
WWOX
PPM1G
DNTTIP2
POLR2J2
SLC12A2
AP2S1
APTX
ARHGAP35
ZNF317
RBPJ
RPS29
KDM3A
C8orf37
PPAN-P2RY11
PPAN
ANGPTL6
TSEN2
B9D1
CDKN2C
SBNO1
DCP1A
PTBP1
YIPF3
POLR1C
LRRC73
PIAS4
KCNJ14
GRWD1
MRTFB
CPLANE2
NAT10
FAF1
WDR77
ATP5PB
CBWD3
ADPGK
RNF130
PHF23
DVL2
PHF7
BAP1
TGOLN2
ENDOV
USP54
RBM26
MBD1
CXXC1
CAPN7
SF3A3
LINS1
ASB7
COPS3
ZNF248
CHUK
TLX2
PCGF1
LBX2
ZFC3H1
THAP2
AMACR
GOLGA8B
ATP5MC2
CFAP410
HSPH1
SRSF11
SMARCA5
RNF32
RBM18
MRRF
UCN2
PFKFB4
STX16
MICU2
UIMC1
RNPC3
MIDN
CBARP
ATP5F1D
UPF1
E2F6
CD320
PPP1R11
POLR1H
CCDC77
RTN3
AGBL3
NRBF2
CLPTM1L
RAD23B
ZBTB14
ATL3
TRAPPC2
OFD1
ANKRD13C
UBALD1
RPRD2
TSSC4
PGRMC2
EIF2S2
PAXBP1
ANO10
ABHD5
TMEM127
IL4I1
CIAO1
KIF22
SMARCD2
VARS2
GTF2H4
MYNN
ACTRT3
TDG
C12orf73
NSUN3
DHFR2
DNAJB4
CNOT4
SPRYD4
GDI2
TSACC
CCT3
MTHFD1
NAPB
SNX33
IMP3
CCNT1
SNRPC
WWP1
E4F1
CBWD6
ASH2L
DNMT1
SIPA1L1
EXOSC10
CST6
HEXIM1
XKR7
FANCD2
LHX9
DHX9
C1orf53
POLR2E
GPX4
AP5S1
POFUT2
EAPP
INO80C
TRAPPC9
ATP5PO
H3C15
H3C14
H2AC19
H2AC18
PCBP1
YOD1
AGA
TAF12
MFSD8
LIN7C
ABHD18
ZKSCAN2
NFXL1
DUS2
DPEP2NB
DDX28
ARF4
C11orf80
WDR6
EIF1AD
BANF1
PFKFB2
INKA2
DDX20
SEH1L
NRF1
SREBF1
TMEM183A
ZNF692
NUP62
ATF5
TIGD5
SPEN
EEF1D
PPA1
IFRD1
ETF1
RBBP5
ACAD9
TADA3
ARPC4-TTLL3
ARPC4
CENPS-CORT
CENPS
STX1A
TMX3
CCDC102B
GPAA1
EXOSC4
PRPF39
IQCC
DCDC2B
CCDC28B
LSM12
G6PC3
DMAP1
CYB561D1
SPG7
NPTN
ZNF420
ZNF296
GEMIN7
EIF2S1
ATP6V1D
ZC3H14
PTPN21
YIPF2
TIMM29
RELCH
PIGN
POLRMT
FGF22
DLD
KBTBD6
CCSER2
DDX19A
TAB3
SLC30A5
SLC35B4
TMED3
IQSEC3
FAM149B1
ECD
SNRPB2
VPS13C
C2CD4A
ERICH6
MRPS18B
ATAT1
CSNK1A1
ZNF473
VRK3
ZNF182
SPACA5B
SPACA5
ELP6
DSE
RAPGEF6
RPS15A
NDUFB10
PCIF1
UQCR11
KCTD13
GORASP2
ZNF329
ZNF414
METTL16
SAXO1
RRAGA
NOL7
PIGF
CRIPT
ZDHHC12
SAMD10
PDCL3
ZNF652
NDUFS7
MED9
RLF
FITM2
PSENEN
LIN37
CLIP4
TMEM101
SMC4
IFT80
TSPYL1
THAP12
GVQW3
CBLL1
TSEN34
MED23
ENPP3
CCDC59
USP39
C2orf68
PIH1D1
ALDH16A1
PAPOLA
PPIL3
NIF3L1