ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025673 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◣ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

SNX25
CFAP97
MTRNR2L2
MSH3
DHFR
PEMT
MTRNR2L8
NME1-NME2
NME1
DUX4
UTP25
NME2
DRG2
SLC5A6
CAD
ATRAID
ZNF296
GEMIN7
PMF1-BGLAP
PMF1
LSM12
G6PC3
THOP1
SGTA
GTF3C4
DDX31
MSTO1
SNRPD1
AKAP10
PTDSS2
ANO9
CCDC86
GATAD2A
GARS1
SLC25A10
MRPL12
ZSWIM7
TTC19
MTHFD1L
SRSF1
DIDO1
GID8
EIF3B
GOLIM4
TENT4A
TBL1XR1
YBX2
HMGA1
SMYD2
PCBP1
DR1
GABPB1
GET4
SAMD10
PRPF6
AP5S1
PPRC1
EEF2K
SNF8
PRKAR1B
DNAAF4
CDKN2C
FAF1
CLN6
GPS2
EIF5A
RPLP0
GCN1
COPS3
LRRC58
KEAP1
TMEM248
ZNF485
SCAND1
PARP1
UTP4
DERPC
CHTF8
DHX33
SPRYD4
TRIAP1
COX6A1
TIMM23
PMS2
AIMP2
HNRNPU
DIAPH1
NOC4L
DDX51
OLFM2
FNTA
ADORA2B
IGF2BP3
GTF3A
LARP1
NRAS
PLD6
RAN
TSNAX
CBWD5
DCP1A
EIF4H
EEF1AKMT3
METTL1
CYP27B1
UAP1L1
MAN1B1
CLPTM1L
SLC3A2
PBRM1
GNL3
ODC1
TRMT6
MCM8
MAPKAPK5
TDG
C12orf73
KMT5B
MLLT1
JADE2
NOL8
CENPP
WNT2B
NT5M
TRPM7
MRPL15
MDN1
LAMP1
DUS2
DPEP2NB
DDX28
MBD3
PIGL
NCOR1
STAMBPL1
KIF5C
SYT5
PFN2
KLF16
PSMG4
ANP32B
CCT2
SLC16A1
TSR1
SGSM2
CBWD2
CENPV
NOL10
SECISBP2
CKS2
HNRNPA2B1
CBX3
COA8
BAG5
BAX
NPM1
INPP5A
UTP11
FHL3
ARSG
SLC16A6
MAP2K2
NCL
UBE2G2
PIAS2
KATNAL2
FLCN
OSGIN1
UNKL
C16orf91
SEH1L
GOLGA3
SLC25A45
FRMD8
SFSWAP
LONP1
CATSPERD
DPH5
GAR1
CLUAP1
C16orf90
MED9
NUP153
CELSR3
DCAF7
NOC3L
PSME3
BECN1
PTMA
MTHFD2
ASAP1
MNT
GPR157
SMARCC1
IARS1
GNPDA1
NELFCD
PLK3
TCTEX1D4
BTBD19
PAQR7
HNRNPL
FARSB
ATXN2
SLC25A33
RHEBL1
KMT2D
CLTC
WDR43
ZSCAN22
PDP2
SHLD2
GLUD1
RTN3
ATL3
CTPS1
ACBD6
RCOR3
ELAVL3
TRMU
FAN1
URB2
TAF5L
RAD50
FAM166A
SLC34A3
TUBB4B
NOCT
NCBP2AS2
NCBP2
RHOQ
ATP6V1E2
PGP
MLST8
BRICD5
SLC35E2A
SLC35E2B
E4F1
FAM156A
FAM156B
TRIM8
HES4
EBNA1BP2
CFAP57
RPS5
RNF225
WDR74
STX5
GYG1
GTF3C5
HNRNPF
PXK
MRPL55
UBE2K
SPHK1
YBX1
FABP5
GNAT2
AMPD2
CLCN7
SLC9B2
ZZZ3
SLC24A1
INTS14
ITGB3BP
EFCAB7
TXLNA
POPDC3
ANKRD40
PARG
FRG2C
C1QBP
GCFC2
PUS1
NUP50
CBWD1
R3HDM2
INHBC
PPIA
MRPL3
CBWD3
CBWD6
FAM227B
DTWD1
PINX1
THNSL1
NAA80
IFRD2
HYAL3
AEN
SOD2
WTAP
NACA
SIAH2
THAP9
SEC31A
AKAP1
QSER1
B9D1
PDS5A
PEBP1
YRDC
C1orf122
SUPT3H
SLCO4A1
ZC3H8
PBX2
GPSM3
ZNF3
COPS6
RNASEH1
B3GNTL1
USP32
ANTKMT
HAGHL
CCDC78
NPHP1
MTLN
PXT1
KCTD20
SPTSSA
COL1A1
IMPACT
CTSC
SUGCT
MPLKIP
RPIA
ZNF202
TRMT61B
FBXW8
FOXK1
ZNF326
HSPA9
RAI14
MRPL21
IGHMBP2
TAOK2
RNMT
FAM210A
EMC8
COX4I1
RALGDS
PUM2
PPAT
PAICS
NOLC1
PRPF3
USP42
METAP1
SNX5
MGME1
TBRG4
MAT2A
ICE2
MAP2K3
SRSF10
ZNF84
EIF3A
EEA1
ANP32A
C10orf95
GPAM
EHD2
USP16
RWDD2B
PYURF
PIGY
HERC3
DCTD
ATAD2
MFAP2
BRWD1
ADGRB1
AATF
LSM4
PHF3
TXNL4A
RBFA
NOP16
HIGD2A
USP36
TRMT61A
CKB
MID1IP1
GTF2H2C
GTF2H2
RRM2
RAD9A
PPP1CA
TOMM34
STK4
HS3ST3A1
EPOP
CCDC116
EIF2D
EPRS1
SLC39A14
PKP4
CCDC148
TRABD
ADCK1
STK19
DXO
LOC110384692
C4B_2
C4B
C4A
TTC7A
MCFD2
TSPAN4
POLR2L
GFPT1
C8orf33
STBD1
TRIP6
SRRT
KDM6B
SEC14L1
RBM28
HPS5
GTF2H1
SLC44A1
AKT3
PHF7
BAP1
SRSF9
DYNLL1
MICALL1
SUGP2
ARMC6
CYCS
MRPL4
SELENOH
RBBP8
UBAP2L
C1orf43
ZKSCAN2
INO80
UNG
ALKBH2
GDI2
AGPAT5
TET3
SREK1
DNAJC27
CARNMT1
LRRC37A3
BHLHE40
CACNB3
UNC45B
NLE1
GCLM
IVNS1ABP
PRKDC
MCM4
NUDCD2
HMMR
MMAA
SELENOO
KTN1
IPO11
DIMT1
NR1D1
MTF2
FBXO5
TAF4B
NT5C3A
PIK3R3
ZNF384
HLTF
GTF3C6
ZNF333
PIP4P1
OSGEP
APEX1
NDUFS1
EEF1B2
TNS2
CITED2
SDF4
B3GALT6
FAM133B
BCAT1
ZNF410
LRP6
CRLS1
TRPC4AP
ARL4A
PALM2AKAP2
PFAS
TEX46
KDM1A
RPS23
ATP6AP1L
NDUFS7
TMEM268
GTF2H3
EIF2B1
TRAP1
COX10
TRIM16
DPY19L4
ZFP36L2
QSOX2
STARD7
CCDC125
FAM83G
QTRT1
SUPT5H
RPS16
ZNF26
POGK
LCOR
TMEM250
CST6
EIF1AD
BANF1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
RRP1B
HSF2BP
CTNNB1
WDR3
GDAP2
TBL1X
GPR89A
TXNDC5
CHD1L
MUC1
NBPF1
CZIB
PMP22
ORAI1
BCL2
DNAJC11
RNASEH2C
KAT5
RAD21
FAXDC2
CNOT8
EIF3D
DDI2
BUD13
PCID2
CUL4A
HPS1
FAM120AOS
FAM120A
UBE2Q1
CHRNB2
TVP23B
GPN3
FAM216A
TPRA1
MCM2
NFAT5
TRIP13
BRD9
THOC5
MAP4K5
ATL1
STEAP1B
IGF2BP1
WDR17
PLCB4
MRPL24
HDGF
PSMA2
MRPL32
ING5
CHERP
PSMC2
DNAJC2
URB1
ZC3H6
BRAP
ACAD10
R3HCC1
ANKLE2
ADPGK
PWP1
TSEN15
VPS9D1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TMEM258
FEN1
AKR1A1
MACIR
PEX3
ADAT2
SLF2
GNA13
ZBTB25
ZBTB1
TMEM167B
USP22
TAF5
KNOP1
IQCK
GTPBP4
ZBTB24
ZNF598
NPW
PRDM15
DCAF8
C14orf93
ZBTB44
APP
PPAN-P2RY11
PPAN
ANGPTL6
ZMPSTE24
P2RY11
PET117
KAT14
G3BP1
LLGL2
TSEN54
CASKIN2
DDX42
CCDC47
GNB2
MRPS17
TSPAN31
CDK4
MARCHF9
PGRMC2
MRPL40
HIRA
SPTY2D1
EIF3M
SPG7
SNRPG
FAM136A
STAT1
USP14
THUMPD3
CNBP
FLVCR1
MCIDAS
CCNO
REPIN1
PAPSS1
BSPRY
NEURL4
ACAP1
TNRC18
LOC100129484
ADK
KPNB1
TUBA1C
RIOX2
UTP18
MBTD1
RNF166
CTU2
ENO1
HK2
LANCL2
PUSL1
ACAP3
CALM1
L3HYPDH
JKAMP
ZNF205
KCNQ5
GPSM1
CARD9
ZSCAN10
NBEAL2
CCDC12
MVK
OTUD7B
CCDC88A
RRS1
ADHFE1
SHMT1
TIPIN
PUF60
HMGB1
USPL1
PES1
UBE2S
SMC3
GNAI2
CDK13
SRSF11
LRRC40
GTF2H2C_2
ATP6V0C
AMDHD2
DGLUCY
MTCH1
RAB3IL1
RPS2
RNF151
TBL3
NOXO1
MDM4
FAM20B
ZFP62
PREP
RBM18
MRRF
NR1H3
ACP2
SEC61A1
PFKFB3
CASKIN1
KHDRBS1
POLR2J3
TMED9
B4GALT7
FXN
URI1
C16orf70
SP3
XPOT
HSF1
BOP1
SREBF1
SERBP1
ZNF236
LMNA
SH2B2
FANCI
C12orf50
C12orf29
TACO1
NUDT9
PACS1
WASHC2C
ZP3
SMIM12
MARVELD1
ZNF292
HEATR1
SIK1B
SIK1
MTF1
LARP4
FAM186A
CANX
CXCL5
PSMB2
RSL1D1
ACYP2
SEC13
MPZL1
USP9X
SCFD2
PSME4
ATL2
DEGS1
ARID1B
PIP4P2
STAG1
PSMF1
HSPE1-MOB4
HSPE1
HSPD1
SRRM2
RPL18A
ZNF121
CTF1
BCL7C
GNPNAT1
CCNL1
SLC39A3
PROX2
PDPR
ZMYND10
RASSF1
TIMM17A
LMOD1
NOM1
TUSC2
PLAC8
DPH2
B4GALT2
ATP6V0B
FCHSD2
N6AMT1
ZFP91
LPXN
WDR18
DDX19A
ITFG2
CSE1L
HSPA8
TTLL4
INTS1
ARRDC2
TOP3A
SMCR8
PPP4R3B
LHX9
C1orf53
POLR1F
YARS1
S100PBP
BCAR3
PDHB
RSBN1L
HDAC7
SCD
TRAF3
SRM
HEXA
UBA52
TMEM41A
UCHL3
COMMD6
ZNF639
SCO1
ADPRM
POLR3D
STEAP1
NSMF
VARS1
TBCCD1
DNAJB11
RBBP7
AVEN
PTDSS1
MTERF3
RINT1
PUS7
SAMD13
MLXIP
RPL36
MICOS13
HSD11B1L
NUF2
DHX37
BRI3BP
NAT10
SLTM
TATDN1
NDUFB9
COPS7A
MARCHF8
MRPL42
MORF4L2
ZMYND19
RNF220
PAQR3
CDCA4
NUDT1
MRM2
MAD1L1
LSG1
NPIPB15
PRR7
KANSL1
HSP90AB1
FBL
SLC35B2
TRA2B
EPB41
TFAP4
NFKBIE
SEPTIN9
CCDC138
TMEM70
ELOC
STX16
RRP15
CD68
MPHOSPH10
MCEE
EIF4B
EIF4A1
GPR176
WWP2
NOB1
TSPAN10
NPLOC4
ZC2HC1C
ACYP1
PURB
KANSL2
DDX59
PAAF1
COA4
ACSF3
WDR4
PAPOLA
CDC25B
KDM2A
ERLIN1
TRUB2
COQ4
RNF103-CHMP3
RMND5A
FRAT2
SLC2A4RG
LIME1
SCMH1
E2F5
MTG1
SF3A3
MTIF2
NCR3LG1
BLOC1S6
DPH6
PMPCA
ENTR1
COQ8A
SPIN3
UBE2D3
HDAC10
TUBGCP6
RIN1
PARP16
PAFAH1B2
CISD2
GSR
PHF19
TMEM17
PRR22
DUS3L
GID4
ATPAF2
ZNFX1
SSB
MRTO4
EMC1
FOXO3
LDHB
AEBP2
FLRT2
ELAC1
FAM98A
TOMM20
JOSD2
ASPDH
DHX9
TOP1
IDE
IRF2BP2
SPATA1
GNG5
KMT2E
P4HB
ARHGDIA
TMA16
GEMIN8
LTV1
ZNF34
RPL8
ZNF517
POLR1B
TARBP1
AP3S1
YTHDF2
PSD3
EDN1
RANBP3
TATDN3
NSL1
LRRC57
HAUS2
TP53BP2
LRRC59
GOSR2
CYB561
THRAP3
ERCC6L2
NOL11
UBR3
METTL5
EED
MRPL44
PCNA
ZC3H15
OR6B2
NDUFA10
TMEM230
COQ2
DLAT
ZNF131
COA1
GP1BB
TRIM47
SEPTIN5
POFUT1
PLAGL2
GFM1
SYNCRIP
DYM
ZNF18
WTIP