ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10476669 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◣ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
XKR7
IQSEC3
INSM2
LIN28A
FAM24A
HTR5A
CELSR3
MTRNR2L2
MSH3
DHFR
KCNH7
L1CAM
NKX1-1
GLRA1
MTRNR2L1
SMIM17
MTRNR2L8
ZC3H18
EPHA10
DLGAP3
RAB37
CHGB
MAST1
RTBDN
CPLX2
ICMT
HES3
DUX4
MYT1
UBE2Q1
CHRNB2
MAPK8IP2
CADM3
RANBP3
SNAP25
GDAP1L1
EAPP
NPPB
BARHL1
FRG2C
NTSR2
LPIN1
SCRT2
CCDC200
ANK1
SST
NRSN1
SCRT1
DGAT1
SIGLEC10
MMP24
SEZ6L2
ASPHD1
SRRM3
PTPRN
LHFPL5
CLPS
BPIFA3
CHRM4
GRM1
SLC12A5
SEZ6
CABP7
ZNF23
VWC2L
USP30
SVOP
BICDL1
CCDC92B
WDR74
STX5
MARCHF4
RIPPLY2
CYB5R4
SLC39A3
VGF
PGBD5
SCGN
STMN3
RTEL1
GPRIN1
LOC102724770
DGCR6
ZFR2
ATCAY
KCNK12
DNAJC6
SPNS2
UNC80
PDE1C
PPP2R2C
HS3ST2
JPH4
PCDH8
STX16
PDE4C
NEUROD1
LEMD3
GPR6
QTRT1
OGDHL
RAB11FIP4
KIF5C
CA4
THAP7
P2RX6
TPH2
CRH
SLC7A6OS
PRMT7
SLC18A3
CHAT
CEMIP
RFC1
HPCA
CDK5R2
C1QL2
FN3K
SCAMP5
KCNAB2
PAX5
GRM2
HBA2
HBA1
HBM
ACSL6
POLR3E
TMEM181
CDC16
KDM3A
UNC13A
RESP18
PPFIA3
C19orf73
PET117
KAT14
GJA10
SCG3
CHGA
PMVK
GCFC2
CTDSPL
LTV1
NDUFAF5
ESF1
TAF12
FBXL16
PRMT8
NCAN
SLC7A14
STAT1
EVI5
FMNL3
TMEM242
FAM227B
DTWD1
CDK5RAP1
SCGB1D2
AKAIN1
RBM45
PDE11A
IRF9
LHX5
TMEM179
CENPA
SKOR2
DHRS2
NRL
DCAF11
FBXO41
EGR4
KCNB1
PTMA
DTD2
SNRPB
NME1-NME2
NME1
KLF11
ODC1
KATNA1
CTXN2
GTF3C3
C2orf66
ZNF513
SNX17
EIF2B4
NPDC1
ENTPD2
GRM4
MARCHF11
ANKRD36C
PSMD3
IKZF3
ZPBP2
SNRPB2
TMEM107
MAMDC2
DEFB132
HHATL
H4C11
H4C12
H2BC14
H2AC14
MAPK12
RANBP2
TIGD1
EIF4E2
NUF2
TMEM106B
RAB5IF
RAP1GAP
MFF
CDIP1
PCNA
TMEM230
CDS2
MGAT3
MLN
PCSK1
N6AMT1
SPOP
WASHC2C
NDUFA12
SHOX2
RNF103-CHMP3
RMND5A
CBFA2T2
CTNNA2
ABCA3
CPPED1
CMTR2
SRSF6
MIA2
RHOB
HRH3
SRSF2
MFSD11
NXF1
JUNB
FRG2
TGM1
RABGGTA
FUS
ZNF783
ST8SIA3
AARS2
NID1
PEX3
ADAT2
HBQ1
AP3B2
CYP4F3
GRIA2
ZDHHC22
XKR4
GRIK2
SIRT4
CLUAP1
C16orf90
TRIM67
CCNC
MYBL2
FAM237A
ZNF207
C17orf75
HEXD
SRP19
BHLHE23
KIAA0895L
EXOC3L1
E2F4
CLCN7
UTP11
FHL3
NOMO2
ABCC6
NOMO3
DCAF10
H4-16
H2AJ
AATF
PTPRH
PTPRS
GOLGA6D
CWC25
MED23
ENPP3
ZFYVE27
NOP14
GRK4
ZNF721
PIGG
S100A8
S100A7A
TPBGL
SCNN1G
SLC25A10
MRPL12
TCFL5
POLR2J3
KCTD5
DCP1A
FRA10AC1
TTI2
POU2F2
WDR36
TOMM5
UGT2B10
PPP1R3C
RNF130
PRDX1
CFAP65
TOP3B
MDP1
CHMP4A
BAIAP2
PAQR4
KREMEN2
NDUFS7
PNPT1
DCTD
TINF2
GMPR2
PTPN6
C12orf57
ZBTB22
TAPBP
SMIM40
DAXX
SNRPD1
RBM28
HDAC4
METTL15
KIF18A
POLDIP3
PMS2
AIMP2
MTIF2
BRMS1L
OPRM1
HTR1A
CCNL1
RPS2
RNF151
TBL3
NOXO1
SMDT1
PHETA2
NAGA
TEFM
SUPT3H
E2F3
TOB1
DDX1
PAQR7
WDR35
PTDSS1
MTERF3
HECTD1
HCRT
KCNH4
APOB
TIA1
PCYOX1
TVP23B
SRFBP1
CALM1
H3C4
ZC3H7A
H4C4
CCNDBP1
H2BC6
SYP
DNER
LAMP1
DUS2
DPEP2NB
DDX28
AAR2
LRRC59
PSMD7
LUC7L3
POLR2C
MTERF1
SLC38A2
WASHC1
SNF8
USP14
NOL10
MAPK8
GRIN1
TOB2
MNAT1
VTA1
NMBR
CCDC83
POU4F3
XRN2
RTF2
JPH3
DPP10
CITED2
CEBPE
KANSL3
FER1L5
H4C2
H3C2
H2AC4
CHEK1
H4C1
H3C1
H1-1
NOMO1
MAP3K19
TM9SF1
IPO4
POR
TSSK4
LATS1
HS6ST1
TACO1
NFATC3
PTGES3
BCL7B
TBCD
PKP4
CCDC148
HEATR5A
SRSF7
BRSK2
MRPL2
KLC4
CUL7
PRMT5
PLS1
RNF227
H2BC15
H2AC15
LMF1
SLC6A12
FOXN2
RPS6
INTS12
GSTCD
PLEKHM3
NSUN5
RNF10
COQ5
NMS
BMS1
SRP54
DMAP1
MITD1
ZNFX1
MRPS23
ATIC
PDHB
UGGT1
CLU
ZNF473
VRK3
MACC1
SULT4A1
CPNE4
LTB4R2
LTB4R
CIDEB
GPR158
SLC6A17
NEDD9
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
ACTA1
RSPH3
ENO1
DDIT4
USP40
PCK2
RPS7
TMEM115
NPRL2
CYB561D2
SLC25A36
ZMYND10
RASSF1
STX18
MRPL53
MOGS
NSFL1C
UCKL1
GOT2
CLTB
GSX1
OPA1
BRF2
GPN3
FAM216A
TTC4
P4HA1
NGEF
DDC
PRKDC
MCM4
ANO10
ABHD5
MTF2
CSE1L
LRRC24
C8orf82
ARL14EP
NHLRC1
HAUS5
TAF5
TBC1D19
FRG1
H3C3
H2BC3
NOC3L
ANAPC11
ALYREF
ZNF337
MAJIN
FBXO9
CILK1
GPSM1
CARD9
EPM2A
INA
CYP21A2
SCRN2
OSBPL7
MRPL10
LRRC46
CERS6
FUNDC2
F8
ATP5F1E
FANCL
TMEM129
TACC3
SLBP
RRN3
GDF7
IHH
GORASP2
SLC3A2
ZNF461
DCPS
SPR
ZNF606
RAB18
HBS1L
GOPC
RPL9
LIAS
TPRA1
MCM2
SRSF5
MOB4
SMC3
HEXA
H3C15
H3C14
H2AC19
H2AC18
TRIP4
PCLAF
H4C15
H4C14
UBA52
SUPT7L
SLC4A1AP
ZNF292
SMIM26
GINS1
DHRS4
DGKD
GPR78
CEACAM5
WWP2
NOB1
EEF1AKMT1
RAD54L2
HDAC2
PHF3
GADD45A
SYNJ1
NEK3
NAGK
STK25
YARS1
S100PBP
NDUFAF3
DALRD3
IMPDH2
WDR45B
RPS15
MAT2A
PARL
RPF2
INTS6
ACTL10
C20orf144
SMPD3
ESYT3
SNAP47
JMJD4
CC2D1A
C19orf57
NUP153
TMEM101
AKAP10
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
INTS5
GANAB
BOLA2-SMG1P6
TSEN15
NDUFAF1
NFKBIA
SSR3
RETSAT
HNRNPC
NFKB2
ACSL3
DOCK6
SPATS1
MTHFD1L
PIK3R3
SPATA25
NEURL2
CTSA
ZSWIM1
SLC38A1
SOD2
RSL1D1
THADA
WTAP
PRPF3
LTN1
SURF6
PIGU
NPIPA3
NPIPA2
PPIP5K1
CKMT1B
CDK3
PODXL2
USP39
C2orf68
MRPL3
ZNF84
POLR1F
WASHC2A
RPL31
LCMT1
MRPS35
SLC25A21
VRK2
WDFY1
IPMK
CISD1
ZNF358
KCNC3
EXOSC6
MBTPS2
SGF29
GOSR1
DNPH1
PEDS1-UBE2V1
PEDS1
SH2D2A
NTRK1
CDH4
NBPF1
NMRAL1
HMOX2
PPIL4
CSTF1
AURKA
RNF187
ARID3A
TMSB10
NUFIP2
ETNK1
PSMB5
PSMB11
MICB
VMP1
PTRH2
CEP295
PEBP1
CAAP1
TMEM14A
RHOT2
RHBDL1
SCFD1
COX7A2
MRPS10
ASL
CA5A
IL25
CMTM5
MAP1LC3B
FBXO31
HINFP
FITM2
FAM228B
TP53I3
SF3B6
PRRG2
NOSIP
PRKAG2
PRR5L
COMMD9
DCLRE1B
AP4B1
DIS3L2
WDR33
CCZ1B
DIP2C-AS1
ATP2C2
NOP9
DHRS1
NCL
PPIP5K2
GIN1
SF3B5
NME6
H4C3
H1-6
DLG2
ANKRD34C
DRG2
PTPN1
ARL6IP1
NET1
CLVS1
TK2
CKLF-CMTM1
CKLF
TMX3
CCDC102B
HES4
ABT1
TSR3
GNPTG
SMU1
UBB
HSF4
PIKFYVE
ZNF843
NOL3
TANK
SLC45A4
PLA2G10
ISG15
TMEM216
ZBTB45
SNRPG
FAM136A
SLC27A5
GATAD2A
RPLP1
MPHOSPH10
MCEE
SLC37A4
NELFA
CDPF1
G2E3
LOXHD1
ZSCAN32
ZNF174
RRP1B
HSF2BP
SPTSSA
C12orf65
ZNF398
ARID1A
PRORP
PPP2R3C
ZNF789
ATP5MF-PTCD1
ATP5MF
ZNF425
RHBDD1
ATP6V1B2
ROCK2
BPHL
IRS1
KPNA5
SNED1
C8orf37
RPS20
C16orf89
ALG1
C7orf25
SMTN
ARMC8
SAMD3
TMEM200A
TTYH3
LOC400499
TRAPPC6B
PNN
ZKSCAN8
FEM1B
RPL10A
INO80C
MRPL44
ARMC5
GTF2H2C
GTF2H2
ZNHIT2
FAU
ANKRD36
CFAP100
CCNP
ZNF878
LPIN3
UTS2R
KRI1
CDKN2D
LRRC37A3
TBP
PSMB1
SSTR5
SLC16A3
DNMT3A
SSNA1
ANAPC2
DPY19L4
RIOK2
PSMF1
RBM12
CPNE1
DNAH14
UCHL5
RO60
SKA1
ATAD2B
H1-2
ID2
KCTD7
PROCR
PRXL2B
NUP50
UPF1
SLC39A4
CPSF1
GEMIN2
RAB10
WDR12
CARF
EBPL
AXIN2
THOP1
SGTA
ZSCAN22
DDX18
SENP1
PFKM
AHCY
NCOA7
AFAP1
ZSCAN25
RFC4
WSB2
ASB6
S100A7
DNAJA2
LBP
MRPS18C
HELQ
MAP3K7CL
CCT8
PCMTD2
LDHA
SCGB1C2
SIT1
CCDC107
ARHGEF39
SRSF3
EPS8
STEAP1
ZNHIT3
ASS1
SPRYD4
BIRC6
PARP16
ID1
USP4
SOCS3
KATNBL1
ASB2
SRXN1
SEM1
RBM18
MRRF
SMARCD2
LSM12
G6PC3
ITFG2
ZP3
WBP1
WDR24
IARS1
JMJD8
STUB1
PARN
BFAR
CETN3
INO80B
TBC1D13
RUSF1
ZCCHC3
C20orf96
TRAF6
RAG1
ZSCAN12
HERPUD1
RGPD8
RGPD5
SLC34A1
RGPD6
FLRT3
ADRA1D
GTF3A
MRPL45
RPL12
LRSAM1
FLYWCH1
NR1H3
ACP2
TMEM167B
TBC1D22A
STAM2
MRPS26
GNRH2
BCAS4
ZNF277
DOCK4
ACTL6B
MEST
MAFB
ITPA
VARS2
GTF2H4
LDAH
FAM133B
TCTE3
ERMARD
COPS8
FAM207A
USP28
SLC25A51
ATR
TNPO1
NDUFC2-KCTD14
NDUFC2
COPS7A
AMN1
NAA20
SCAP
DIABLO
ARL4A
PITRM1
WSB1
XYLB
UBAP2
MRPS2
C9orf116
TXNDC17
KIAA0753
CEP68
SMIM24
C10orf88
PPP4R3B
CLN5
TOP1
NCOA5
PRKAR1B
FAM98B
FOXJ3
SPHK1
FAM187A
EFTUD2
CCDC103
ZNF184
SUMF1
DBNDD2
TFAP4