ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018670 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◣ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Olfr806
Esr1
Wwox
Abhd6
Tent5c
Vmn2r102
Sbno2
Tcstv3
Gcgr
Kpna1
Scn8a
Csf2ra
Brox
Aida
Stap2
Mpnd
Dchs2
Oasl1
Hrh2
Crebzf
Il31ra
Creb1
Sly
Gm20931
Zfp598
Znhit1
Plod3
Tpm1
Pik3c2g
Olfr117
Myocd
Col17a1
Cldn34d
Thbs3
Mtx1
Zbtb12
Tmem203
Ndor1
Obi1
Olfr389
Lrch4
Fbxo24
Zdhhc17
Ankar
Ifna13
Aven
Pnpla8
Gtf2a2
Trim12a
Rrad
Cdh16
Grm7
Cbr3
Slc33a1
BC034090
Calr3
1700030K09Rik
Lgals7
Tmem265
Commd1
Klrb1b
Zrsr1
2610008E11Rik
Olfr1219
Awat2
Krtap3-2
Gulp1
Olfr850
Ms4a1
Sirpb1c
Tmem132d
5530400C23Rik
Mettl4
Nagk
Rbp4
Rasip1
Izumo1
Gdap1
Dhcr7
Edil3
Gm20594
Rps29
Zfp148
Tgif1
Lurap1l
Kbtbd3
Aasdhppt
Gm14595
Gm14590
Mmp25
Ifna5
Olfr99
Usp17le
Fah
Lhx5
Akap12
Nemf
Fgf22
Frat1
Cyp2t4
Pbk
Rin2
Ccdc184
Asb8
Prickle1
Ergic1
Fxr2
Taar7a
Ct55
Car5a
Rmi2
Gm4925
Arl1
Olfr1158
Trim34b
Olfr620
Olfr619
Sh3kbp1
Arl13a
Abcb1b
Opa1
Zfp607a
Senp8
Myo9a
Glis2
Plekhg1
Rsl24d1
Slc38a10
Kdm3b
Dcaf5
Dcaf10
Pold4
Fgf5
Trappc2l
Galns
Dtx3
Arhgef25
Tle4
Dgka
Rnf220
Anapc15
Dpy30
Gabarapl1
Krt222
Luzp4
Hdgfl1
Gm21258
Gm20736
Vmn1r13
Bves
Zscan4f
Snurf
Snrpn
Ezhip
Eda2r
Dok6
Atp2b4
Arhgap18
Tmigd1
Wdr72
Wiz
Ccdc73
Rad18
Fis1
Klhl29
Bptf
Bbs2
Tyw1
Sbds
AW549877
Nudt18
Zfp1
2510009E07Rik
Tmem125
Rps12
Shoc2
Bbip1
Dpep2
Mup9
Ndufaf4
Abl1
Stx11
Hip1
Etl4
Myoz3
Ttc26
Fam227b
Dtwd1
Cyp26a1
Nudcd2
Hmmr
Specc1l
Ipo11
Pappa2
Zscan4b
Tbc1d5
Olfr594
1810037I17Rik
Ctxn3
Olfr482
Gm4836
Gm14819
Gm14632
Gm10487
Gm10486
Gm10230
Gm10147
Gm10096
Gm10058
Itgb2
Zcchc13
Mup20
Olfr805
Vmn2r6
Vmn2r42
Trpv5
Olfr1197
Defb39
Zfp143
Pcbp1
Cntnap1
Ccr10
Tnfrsf9
Cd1d1
Mcub
Satb2
Atf7ip
Per2
Eprs
Adipor2
Ccpg1os
Ccpg1
Ctsz
Mroh7
Abr
Zfp263
2610301B20Rik
Tmem43
Chchd4
Macroh2a2
Rbks
Babam2
Sspn
Hmox2
Kdelr2
Hexim2
Olfr157
Akap13
Gpr35
Tmem108
Pja1
Nrg1
Cenpi
Ankrd42
Scgb2b26
Olfr729
Olfr728
Pth
Cyp2c67
Was
Ssty1
Gm21454
Cst10
C1rl
Spdye4a
A930009A15Rik
Fyb2
Wif1
Spata46
Rasgrf2
Pnma3
Pla1a
Il2rg
Gm614
Dntt
Crhr2
Taco1
Apba2
Plec
Nprl3
Mrap
Tmbim6
Six6
Lyrm9
Cks2
Syt12
Ubp1
Elf2
Zfp385c
Ndufa12
Katnbl1
Ambra1
Slx4ip
Nr2f2
Wwp1
Olfr1030
Ky
Zfp820
Perm1
Olfr1228
Hrh1
Adpgk
Chst11
Rarb
Nfil3
Polrmt
Tacstd2
Xrcc1
Pinlyp
Styxl1
Mdh2
Rxrb
Col11a2
Naa11
Pidd1
Slc25a22
Denr
Fyco1
Nek2
Letmd1
Rbm39
Cdx1
H2ap
H2al3
Rasl10b
Supt5
Zfp260
Zfp566
Rbx1
Cdk12
Asmt
Slc15a1
H4c8
Calr
H2ac10
Eapp
Gabarapl2
Tex14
Adgra2
Fbxw7
Akirin2
Tmem181a
Hivep3
Tomm5
Gpx4
Efnb3
Ints3
Kcnk5
Bcl2a1a
Aqp3
Fubp3
Atp11b
Plekhb1
Hoxb13
H4c3
H1f6
Oxnad1
Dph3
Mtf2
Tmem33
Cdk15
Mkrn1
H3c7
Xylb
Bcl2a1b
Notch4
Znfx1
Socs3
H4c2
Trim29
Ilf2
Tmem191c
Enpp4
Tctn1
Prdx6
BC107364
H3c6
Ssty2
Gm21242
H4c4
H2bc6
Brwd1
Taf13
H3c2
H3f3b
Rdm1
Cidea
Bcl2a1d
Capns1
Slc6a16
Cd37
Srsf7
Slc35g3
Polr2a
Mafa
Tcp11
Tfrc
Cic
Pspn
Erdr1
Alkbh7
H2bc9
Olfr180
Ksr1
Kat7
H4c1
H3c11
H2bc22
H2ac22
Klf2
Mycn
Slc43a1
Ier5
Baz1b
H3c3
H2bc3
Cd44
Ect2
Poldip3
H4bc24
H2bc23
H2ac24
H2ac23
Pmepa1
H3c8
Ier2
Rhobtb1
A930033H14Rik
H1f5
Mreg
H4c18
Taf12
Vgll2
Adam5
P4ha3
Ncmap
Taf4
Ttpal
Dppa2
H3c15
H3c14
H2ac19
H2ac18
H4f16
H2aj
Hspa5
H4c11
Sub1
Cyth4
Dusp9
Rnf19b
Ing1
Jund
Iqcn
Itga5
Adgre5
Fam24b
Phf5a
Aco2
H2ac4
Malt1
Nodal
Gtpbp4
Mettl14
Ifitm7
Bmerb1
Sgf29
Rnf13
Prkdc
Ap3s2
Trib3
H4c9
H2bc11
H2ac11
Nabp1
Nfyb
Srsf3
Fbxo6
H1f2
Rusc1
Foxp1
H3c13
H2bc18
Galnt2
Tm7sf3
H2bc21
H2ac21
H2ac20
H3c1
H1f1
H2bc4
H2ac6
Dlg4
H2ax
Sfi1
C1qbp
Zdhhc18
Zfp827
Gja4
Ttk
Ccin
Icam1
Evi5
H4c12
H2bc15
H2ac15
Hnrnpab
H4c17
Bmt2
H2bc12
H2ac12
Foxo3
Klf4
Rgs18
H4c6
Ppdpf
Gtf2a1
Gstp2
Nudt4
Dedd
Aadacl2fm1
Rarg
H1f4
Fam53c
Arrdc2
Hspb8
Creld1
Gm3448
Gm3417
Plk3
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Dcaf4
Rsrp1
Slc29a1
Mymx
H3c10
H2bc14
H2bc13
H2ac13
Smc3
Btg2
Cited2
Mphosph9
2810006K23Rik
Fbxo31
Ubb
Sumo1
Asph
Zswim8
Jarid2
Hspa8
Mok
Rrn3
Tcte3
Gm3435
Zbtb37
Rai1
Acp6
Mtg2
Ube2o
Atp2a2
Ttf1
Tob1
Arid5a
Sdha
Ccdc127
Arf4
Smarca5
Arhgap19
9030025P20Rik
Bcar1
Ints6
Hoxa1
Pitpnc1
Nanog
Pcx
Tbc1d10b
Mylpf
Rnd3
Junb
Hrob
Agrp
Porcn
S1pr2
Ggact
Sacm1l
Ranbp3l
Kng2
Tpm2
Thrsp
Dcpp1
Jam2
Hexim1
Rab7
Gm867
Chchd10
Phc1
Rpl3
Slc9a1
Calm2
Rfc5
Agbl5
Ankrd39
Zfp532
Trim41
Rnf169
Mis18bp1
Nphs1
Atg14
Itpk1
Guf1
Ubxn2a
Sde2
Nufip2
Trim7
Stra8
Creb3l3
Fam32a
Fus
Mybpc3
Utp14b
Hps5
Gtf2h1
Acsl3
Mpp7
Dpysl3
Sgk1
Mbd3
Nop58
Resf1
Dpp4
Kank3
Hsp90aa1
Stk3
Srsf5
Insig1
Sntb2
Rnaset2b
Capn3
Nudt1
Csrnp2
Sumf1
Trpm1
Spata33
Chmp1a
Mbd6
Ddit3
Zfp979
Fut8
Haus1
Atp5a1
Ppp1r10
Mrps18b
Psmb7
Plxdc1
Mib2
Gm648
Dnajb9
Uck1
Kazn
Tro
Rnaset2a
Pbld2
Hnrnph3
Tsc22d1
Npbwr1
Spred2
Gtf2a1l
4921539E11Rik
Klf6
Tle5
Zfp36l1
Hagh
Fahd1
Dgat2
Arl15
Sirt4
Ddit4
Calm1
Eif2s3y
H4c14
Rbm14
Gm21992
Msh6
Gtf2b
Gpx1
Cltc
Mobp
Hsp90ab1
Ctsl
Crlf2
Nsd1
D230025D16Rik
Misp3
H2-DMa
Brd2
Adck5
Ankrd28
Ankrd44
Raf1
Atp1a1
Cbx4
Pyroxd1
Olfr646
Ndufs7
Ndufa6
Gpcpd1
Pnp
Tmem116
Erp29
Aplp2
Vars
D17H6S56E-5
Gadd45a
Coro1b
H1f3
Serpinf2
Rpgrip1
Actb
Rnf103
Jpt1
Ccn4
Tas2r134
Eif4g2
Atxn2
BC005537
Clu
Trim40
Trmt1
Men1
Prdm14
Il3ra
Mat2a
Lman1
Id3
Tubb4b
Sbk2
Kmt5b
Rab8a
Chd9
Gja1
Ermard
Ubr4
Gipc1
Prdx1
Errfi1
Dhx32
Nme1
Cox17
Rpl11
Exosc5
Bckdha
Srsf2
Mfsd11
Spg20
Sema4b
Sf3b1
Cog6
Mllt6
Cyfip2
Dusp1
Dag1
Eif4a1
Brsk1
Cdh12
Nup50
Ghdc
Mknk2
Cenpm
Tmem135
Pcna
P4ha1
Clec11a
Mcl1
Ctnna3
H2-Bl
Arl4d
Wsb1
Dhx9
Lgals9
Slc12a7
Snx6
Arrdc3
Ltn1
Ubc
Tefm
Spc25
G6pc2
Lipe
Dhx8
Tnfrsf19
Proca1
Actn4
Ppp1r15b
Btg1
Wsb2
Gapdh
Extl1
Amd2
Amd1
Tmem107
Hnrnpa2b1
Hbegf
Cbx3
Gtf2f1
Muc1
Mrpl37
Cyb5rl
Amacr
Ago2
Selenbp1
Ndufs8
Ehd4
Arl6ip1
Vstm4
Trp53inp1
Ttc25
Sec22c
Sertad1
Agpat2
Omp
Phf11d
H2bc1
H2ac1
Nr6a1
Slc38a2
Ftl1
Vegfa
Ifrd1
Zfp980
Sephs2
Kctd5
Slc38a5
Mill1
Gcm2
Clcn4
Ttc39c
Spg11
Zfp710
Tuba4a
A630095N17Rik
Kcnn2
Dmxl1
Taar6
Faim
Abcb7
Ppp2r5e
Marchf3
Ddx5
Cep95
Atg4d
Slbp
Itpr1
Fgl2
Rita1
Ddx54
Cfl2
Gtf3c6
Dok4
Prmt8
Cfap126
Luzp1
Mrpl44
Hjurp
A730008H23Rik
Zfand5
Cacng6
Zfp438
Cpt1a
Nsrp1
Uspl1
Fn1
Zfp119a
Taok3
Gfod1
Tnrc6c
Acsl4
Rbmy
Gm21708
Gm21677
Sqstm1
Bcl11b
Dgat1
Rhob
Nfam1
Ppp3ca
Pabpc1
Ppp1r3c
Gabrb3
Txlng
Tmem205
Sod1
Ccdc159
Fos
Fmc1
Skp1
Eif1
U2surp
Stpg4
Nfe2
Mdm4
Elf1
Acly
Megf8
Rwdd2b
Tob2
Klf7
Rcbtb1
Sema4f
Vcl
Tlcd1
Peli1
Ifna6
St3gal3
Rreb1
Tpst1
Slc25a39
Tspan9
BC031181
Katna1
Dennd6a
Gucy1a2
Cep43
Vmn2r55
Slc25a3
Dpysl2
Dhcr24
Btrc
4921517D22Rik
Sepsecs
Ankrd11
Maats1
Ep400
Msmo1
Spata16
Etv3l
Cela1
Fam131c
Dnaja1
Ptpmt1
Lgi4
Fxyd7
Fxyd1
Rxrg
Pigt
Eef1a1
Cnga1
Chchd1
Pitrm1
Eif4e1b
Grap
Hnrnph1
R3hdm2
Gfpt2
Mafb
Atp6v0c
Mfsd14a
Ccnyl1
Slc9a3r1
Inmt
Gm20939
Arhgap27
Tmem64
Maml1
Tmem60
Phtf2
Rps3
Epha2
H2-M5
Vgll4
Sgpl1
Havcr2
Glul
Ass1
Ino80c
Wdr77
Phactr3
Atp5pb
Klk8
Slx1b
Bola2
Rps9
Mnat1
Rps20
P4hb
Jun
Trmt2a
Ranbp1
Mrpl39
Ckb
Plk2
Rusc2
Clic4
Ncl
Knl1
Gm20806