ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10562781 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◣ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Cldn34d
Tcstv3
Brox
Aida
Xylb
Slc6a16
Cd37
Bcl2a1a
Tomm5
Tmem181a
Hoxb13
Cdk15
Cltc
Rbks
Babam2
Slc15a1
Gabarapl2
Gpx4
Cyp26a1
Enpp4
Crlf2
Dedd
Palb2
Dctn5
Mkrn1
Hivep3
Fubp3
Notch4
Mafa
Ints3
Fcgr3
Atp11b
Slc29a1
Mymx
Gm4981
Mobp
Gm3667
Cdx1
Psmd3
Asmt
Tmem191c
Adgra2
Mtf2
Bcl2a1b
Dusp9
Calr
Cidea
Cic
Tcp11
Rpl22
Aqp3
Agbl5
Tmbim4
Brwd1
Pmepa1
Dppa2
Atp6v0c
Amdhd2
Brsk1
Snrpb2
Exoc2
Misp3
Zfp827
Sugp2
Armc6
Vmn1r2
Ankrd28
Fbxo31
Pomt1
Capns1
Kazn
Dcaf4
Ncmap
Ifitm7
Bmerb1
Denr
Ndufs7
Vamp4
Slc43a1
4921517D22Rik
C1qa
Tctn1
H2-Bl
Hes7
Tmem125
Smarca5
Il3ra
Imp4
Ccdc115
Zfp978
Sspn
Bcl2a1d
Cdsn
Mbd3
Gdf15
Rcn3
Ctnna3
Exd1
Chp1
Zfp692
Ttpal
H2ap
H2al3
Arhgap19
Themis2
Pdcd5
Guf1
Zdhhc18
Zfp991
Pidd1
Slc25a22
Arrdc3
Baz1b
Trmt2a
Ranbp1
Mok
Zfp839
Itpk1
Nanog
Ppdpf
Tmem40
Rusc1
Mdm4
Sepsecs
Resf1
Btn1a1
Efnb3
Spred2
Ube2o
Fam131c
Fbxo6
Acp6
Jam2
Ercc2
Trim7
Kmt5b
Mettl26
Ubxn2a
Aloxe3
Phf5a
Aco2
Agrp
Ilf2
Rbsn
2610042L04Rik
Ercc6l
Ttk
Plxdc1
Ksr1
Dnase2a
Nkap
Cox19
Cacng6
Ttc24
Iqgap3
Sfi1
Tfrc
Plcd3
Acbd4
Lama5
Dph2
B4galt2
Atp6v0b
Ubr4
Knl1
Nemf
Letmd1
Vps28
Rab11a
Abcc10
1810020O05Rik
Gm3739
Kmt2a
Cenpm
Tspan9
Tbc1d10b
Mylpf
Nodal
Scarf1
Rilp
Dpp4
Dux
Ttc25
Plekhb1
Smarcc2
Clcn4
Vps13d
Lamp1
Hrob
Ndufs8
Thrsp
Nphs1
Vars
D17H6S56E-5
Oxnad1
Dph3
Rhobtb1
A930033H14Rik
S1pr2
Odc1
Foxp1
Nsd1
Dock6
Rreb1
Tia1
Gins3
Kat7
Borcs6
Polg
Steap3
Gm2237
Rex2
Cfap126
Mreg
Best3
Ccdc107
Kcnk5
Gm36210
Mrps15
Ghdc
Gm973
Sycp3
H4c8
Elf1
Wbp4
Txnl4a
Gm16286
Prx
Rps29
Rai1
Hoxa1
Gm10406
Aurkb
Itga5
Gm13290
Gm13289
Gm13285
Krcc1
Gm13272
Ifnz
Gm13276
Gm13278
Gm13277
Pspn
Alkbh7
Zbtb40
Brms1
B4gat1
Icam1
Kctd5
Phc1
Acmsd
Gnb2
Mis18bp1
Spc25
G6pc2
Fmc1
Psmb7
Gne
Rarg
Gja1
Ltn1
Rwdd2b
Ccdc113
Cpsf1
Cacnb3
Znhit3
Unk
Erdr1
Trim41
Pyroxd1
Herc4
Zfp979
Stard6
4930503L19Rik
Cldn14
Tm7sf3
Sacm1l
Khdrbs1
Tmco2
Kdm8
Kank3
Spata33
Chmp1a
U2surp
Sec31b
Tac4
Usp31
Acp5
Adgre5
Sbno2
Rgl2
Megf11
Etfbkmt
Gipc1
Nipsnap2
Lsm5
Sec22c
Ppp3ca
Gm13283
Gm13286
Gm13271
Zfp809
C1qbp
Taf12
Lgals9
Mynn
Actrt3
Speer4a
Amt
Pik3c3
Snx12
Tas1r3
H4c12
H2bc15
H2ac15
Smim40
BC107364
Rab3gap2
Megf8
Rtn4rl1
Dph1
Nek2
Zfp532
Mllt6
Nupr1l
Zfp523
Ap1b1
Med16
Mettl25
Ccdc59
Nr6a1
Zfp184
Sdha
Ccdc127
Taok3
Snx18
Fam25c
Insyn1
Suds3
Slc35d1
Col9a2
Klf2
Mtg2
Nkg7
Lim2
Myrf
Abcg2
Gm5796
Etfa
Tekt2
Adprhl2
Fyco1
Snrnp70
Rfc5
Ankrd44
Ubc
Abcb7
Ncam1
Efcc1
Tex14
Mib2
2610301B20Rik
A930018P22Rik
Zfp984
Atp6v0d1
Atp2a2
Dok4
Prmt8
Ccdc124
Npas4
Gm3752
Prss47
Slamf8
Nfyb
Uspl1
Kansl3
Fer1l5
Lipe
Mfsd1
Hspb8
Bcl11b
H2-Q8
H2-Q6
Mtg1
Lasp1
Rarb
Poldip3
Sgf29
Atxn7l2
Srgap1
Kat6b
Knop1
Iqck
Tbrg1
Socs3
Dhx32
Gm51573
Max
Trim56
Snrpa1
Trim6
Ppp1r15b
Psma2
Mrpl32
Rbm48
Pex1
Smim17
Gm3448
Gm3417
Jarid2
9030025P20Rik
Tle5
Lta4h
Accsl
Gpcpd1
Tti2
Mief1
Cyb5r4
H2-Q9
H2-Q7
Clpb
Zfp982
Slc39a3
Plekhg2
Plekhg4
Hagh
Fahd1
Gm7244
Sh3glb1
Kcnb1
Prdx6
Rap1gap
Gm3264
Ect2
Utp3
Ube2j2
Spink10
Fbxo38
Wfdc8
Wfdc6b
Cc2d1a
4930432K21Rik
Tvp23b
Eif4e
Speer4e
Ttll3
Fam81a
Tmem116
Erp29
Lman1
Gm20939
Ndufs1
Eef1b2
Telo2
Ptx4
P2rx7
Gtpbp4
Extl1
Gpatch3
Adnp
Uqcc2
Ptpmt1
Dcaf10
Gipc2
Ndufa6
Wsb2
Irf5
Dcp1a
Aven
Tyrobp
Ankrd45
Rrs1
Adhfe1
Cog6
Cln8
Rasl10b
Sumf2
Mlst8
Med4
Gm10130
Taf13
Abl1
Fus
Uqcrc1
Trip4
Ccdc88b
Meiob
Gm35549
Saysd1
Ptcd1
Cpsf4
Snrpd3
Gucd1
Rabggtb
Cryzl2
Agmat
Spaca6
Usp30
Msh4
Muc1
Cenps
Rnase4
Ang
Eapp
Ckb
Gm3005
Crtc1
Gm8764
Gm6763
Gm21312
Gm21304
Gm21293
Gm20765
Ap3s2
Srp19
Cdk5rap1
Cstf1
Aurka
Tmem107
Polr3e
Drg2
1810010H24Rik
Ceacam16
Znfx1
Cdk12
Ms4a14
H3c11
H2bc22
H2ac22
Serpinf2
AU041133
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Hspa5
Mrpl44
Grtp1
Mrs2
Ptprz1
Cct8
Mkrn3
Sppl2b
Lsm7
Cacng2
Dpys
Chpt1
Vps29
Rad9b
Zmym4
Zfp948
Tcte3
Gm3435
Olfr142
Atxn2
Ankle2
N4bp1
Rnf169
Nudt15
Get1
1700102P08Rik
Zswim8
Fam32a
Chchd1
Preb
Styxl1
Mdh2
Tsc1
St3gal3
Man2b2
Dffb
Cep104
Btbd9
Slx1b
Bola2
Tcea1
Orc5
Klhl20
Hemk1
6430571L13Rik
Pstk
Impa1
Taco1
Vwa8
Stx12
Secisbp2l
Pcyt1a
Ier2
Clptm1l
Rab8a
Bcar1
Fignl1
Trmo
Fbxo9
Cilk1
4930558K02Rik
Pigc
Cdk5rap2
Rnd3
Sema4b
Mrpl39
Psmb2
Fam53c
Slc9a1
Ptp4a1
Pemt
Ube2f
Qrich1
Zfp981
Bglap3
Bglap2
Pafah2
Ogfod3
Hexdc
Mif
Cnot2
Ndrg3
Aurkc
Aebp2
Adrm1
Ndufaf1
H3f3c
Sirt4
Rps3a1
Ddx56
Tbc1d14
Mtdh
Oga
Ywhae
Man2c1
Gm21671
Fbxo46
Bhmg1
Med6
Wdsub1
Dguok
Gabpb1
Ddost
Osbpl1a
Nsfl1c
Trmt10c
Ndufab1
Mrps28
Dars
Gm7762
Syce1
Wdr77
Atp5pb
Wdr82
Aip
Tmem134
Eif4enif1
Ambra1
Btbd8
Hsd17b14
Agk
Mpc1
Mrpl4
Hdac2
Gm7347
Pex14
Dffa
Gm5458
Dpy19l4
Ints14
Them6
H1f2
Rtcb
Zcchc4
Faah
Gm21190
Tjp3
Pip5k1c
Ccni
2010109A12Rik
Rrm1
Dnm1l
Tfdp1
Klhdc10
Stk31
Ptpn6
Grcc10
Ybey
Mcm3ap
Pom121
Rbck1
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Dpp9
Gm3636
Atg14
Myo10
Zfp770
Ankrd13c
Gm11127
H4f16
H2aj
Hexa
Snx29
Mdk
Rad23a
Fank1
Mcm6
Mrps33
Snrnp27
Lamtor3
Tbcb
Polr2i
Ovol3
Gm13279
Gm13275
Cherp
Gabpb2
Gm13287
Gm1979
Bcas2
Nsun3
Nudt9
Slc26a8
Mapk14
Vmac
Ndufa11
Rmnd1
Armt1
Nup214
Itgb1bp1
Cpsf3
Selenot
Gm3411
Car3
Ufsp2
1700029J07Rik
Gtf3c5
Usp21
Nfyc
Olfr806
Abhd6
Wwox
Kpna1
Esr1
Tent5c
Csf2ra
Oasl1
Il31ra
Vmn2r102
H2ac10
Fbxw7
Akirin2
H4c3
H1f6
Gcgr
Tmem33
Fam227b
Dtwd1
H3c7
H4c2
Trim29
Hmox2
H3c6
Ssty2
Gm21242
H4c4
H2bc6
H3c2
H3f3b
Rdm1
Rasip1
Srsf7
Slc35g3
Polr2a
Izumo1
H2bc9
Olfr180
H4c1
Ifna13
Mycn
Ier5
H3c3
H2bc3
Cd44
H3c8
H1f5
Vgll2
Adam5
P4ha3
Taf4
H3c15
H3c14
H2ac19
H2ac18
Dchs2
H4c11
Sub1
Cyth4
Rnf19b
Ing1
Jund
Iqcn
Fam24b
H2ac4
Malt1
Mettl14
Crebzf
Rnf13
Prkdc
Trib3
H4c9
H2bc11
H2ac11
Nabp1
Srsf3
Gm20594
H3c13
H2bc18
Galnt2
H2bc21
H2ac21
H2ac20
H3c1
H1f1
H2bc4
H2ac6
Dlg4
H2ax
Abr
Gja4
Ccin
Evi5
Hnrnpab
H4c17
Bmt2
H2bc12
H2ac12
Foxo3
Klf4
Rgs18
H4c6
Gtf2a1
Gstp2
Nudt4
Aadacl2fm1
H1f4
Arrdc2
Creld1
Plk3
Rsrp1
H3c10
H2bc14
H2bc13
H2ac13
Smc3
Btg2
Cited2
Mphosph9
2810006K23Rik
Ubb
Sumo1
Asph
Hspa8
Scn8a
Rrn3
Zbtb37
Tmigd1
Ttf1
Tob1
Arid5a
Arf4
Ints6
Stap2
Mpnd
Pitpnc1
Pcx
Junb
Taar7a
Porcn
Ggact
Ranbp3l
Kng2
Tpm2
Dcpp1
Hexim1
Rab7
Gm867
Chchd10
Rpl3
Calm2
Ankrd39
Sde2
Nufip2
Stra8
Creb3l3
Mybpc3
Hrh2
Lrch4
Fbxo24
Utp14b
Hps5
Gtf2h1
Acsl3
Mpp7
Dpysl3
Sgk1
Zfp143
Nop58
Hsp90aa1
Stk3
Srsf5
Insig1
Sntb2
Rnaset2b
Capn3
Nudt1
Csrnp2
Sumf1
Trpm1
Mbd6
Ddit3
Fut8
Haus1
Atp5a1
Ppp1r10
Mrps18b
Gm648
Dnajb9
Uck1
Tro
Rnaset2a
Pbld2
Hnrnph3
Tsc22d1
Npbwr1
Gtf2a1l
4921539E11Rik
Klf6
Zfp36l1
Dgat2
Arl15
Ddit4
Calm1
Eif2s3y
H4c14
Rbm14
Gm21992
Msh6
Gtf2b
Gpx1
Hsp90ab1
Ctsl
Cbr3
D230025D16Rik
H2-DMa
Brd2
Adck5
Raf1
Atp1a1
Cbx4
Olfr646
Pnp
Aplp2
Gadd45a
Coro1b
H1f3
Rpgrip1
Actb
Rnf103
Jpt1
Ccn4
Tas2r134
Eif4g2
BC005537
Clu
Trim40
Trmt1
Men1
Prdm14
Mat2a
Id3
Tubb4b
Sbk2
Chd9
Ermard
Prdx1
Errfi1
Nme1
Cox17
Rpl11
Exosc5
Bckdha
Srsf2
Mfsd11
Spg20
Sf3b1
Cyfip2
Dusp1
Dag1