ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX337439 | Liver
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◣ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Tcstv3
H4c3
H1f6
Junb
Srsf7
Hspa8
H4c4
H2bc6
H3f3b
Slc35g3
Polr2a
Rdm1
Ing1
Jund
Iqcn
Arrdc2
H3c15
H3c14
H2ac19
H2ac18
Nabp1
Btg2
P4ha1
Taf13
Mafb
Eapp
Rsrp1
Calm2
Srsf5
Tob1
Clu
Ints6
Rnaset2b
Arid5a
Dgat2
Calr
Rnaset2a
Ddit4
Slc9a3r1
Gpx1
Mybpc3
H2bc21
H2ac21
H2ac20
Atp1a1
Hsp90aa1
Calm1
Hspa5
H2ax
Tuba4a
A630095N17Rik
Epha2
Clic4
Utp14b
Acsl3
Hexim1
Mphosph9
2810006K23Rik
Ier2
Man1a
Zfp36l1
Rpl3
Sde2
Hhex
Vcl
Vegfa
Raf1
Taf4
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Klf6
Dnajb9
Irs2
Nufip2
Znfx1
Cebpd
Hnrnpab
H1f4
H2-DMa
Brd2
Tex14
Cited2
Ttc41
Hsp90b1
Ipmk
Cisd1
Jun
Mertk
Arl4d
Fam53c
Cebpa
Hsp90ab1
Ubb
Ep400
Actb
Trp53inp1
Ctsl
Tubb4b
Sub1
Ppp1r3c
Rnd3
Ndufaf3
Dalrd3
Tob2
P4hb
Rnf103
Zbtb37
Rhob
Frmd6
Socs3
Eef1a1
Rnf19b
Zfand5
Aplp2
H4c9
H2bc11
H2ac11
Slc9a1
BC005537
Fus
Unc5b
Mknk2
Amd2
Amd1
Sephs2
Id3
Slc38a2
Klf7
Vamp1
Plk2
Rhou
Ttc23
Lrrc28
Irf8
Kpna1
H4c14
Mad2l1bp
Acly
Susd6
Whamm
Fsd2
Dnaja1
H4f16
H2aj
Mat2a
Sspn
Ier5
Acy3
H4c17
Hs3st3b1
Kdm4c
Fdx1
Ell2
Herc2
Mapkapk2
Shld2
Glud1
Hnrnpa2b1
Cbx3
Snrpe
Ndel1
Sesn2
Idi1
Klhl21
Rab43
Nudt4
Ifrd1
Irak2
Traf7
Eif4g2
Wsb1
Slc31a1
Fkbp15
Sirt1
Fos
Gtf2a1
Tsc22d2
Gadd45a
Sf3b1
Hjurp
A730008H23Rik
Sqstm1
Slc25a3
Cebpb
Gtf2b
Marchf3
Tcta
Rhoa
Neu1
Insig1
Plk3
H4c2
H3c2
H4c1
Prdx1
Tnrc6c
Id2
Maml1
Hspb8
Trf
Ddx24
Nr3c2
H4c8
H2ac10
H3c8
Klf10
Ncoa3
Ctnnb1
Nfkbia
Ugdh
Mcl1
Ncl
Adk
Csrnp2
Arvcf
Nfkbiz
Tango2
Srsf2
Mfsd11
Btg1
Gapdh
Selenop
Acer3
Ube2h
Pdia4
D230025D16Rik
Pdia3
Catsper2
Arl15
Cd81
Peli1
Plec
Ftl1
Fasn
Jpt1
Mllt10
Fzd5
Jak1
Gpat4
Srsf3
Cyp2d10
Rnd1
Lgr4
Dhx8
Msmo1
Taf12
Mtarc2
Myo6
Igfbp4
Pcf11
LOC114841036
Fkbp2
Luzp1
Baiap2
B2m
Tpcn1
Iqcd
Olfr806
Arl6ip1
Slbp
Med23
Ppp1r10
Mrps18b
Ccnyl1
Gpcpd1
Ern1
Raph1
Cat
Slc25a30
Gtf2f1
Gclc
Atf3
Ppp1r15a
Plekha4
Kctd12
Dusp1
Eif4a1
H3c7
H2bc9
Tat
Acer2
Herpud1
Haus1
Atp5a1
Psmb10
Lcat
H2-K1
Glul
Tra2b
Smc3
Foxo3
Gfod1
Foxa3
Sympk
Fam214a
Sap18b
Sap18
Csrnp1
Cyb5a
Snrk
Mterf1a
Flnb
Cdo1
H1f2
Rbm14
Gm21992
Zfp36l2
Slc16a10
Ddx5
Cep95
Sc5d
Dnajb1
Sorbs1
Slc5a3
Mrps6
Stat2
Apof
Tsc22d1
Chchd2
Slc26a8
Mapk14
H3f3a
Fam174c
Cirbp
Degs1
Ttc7
F2r
Mbd6
Ddit3
Kctd5
Snai1
Snx18
Ppp1r2
Ass1
Angptl4
Adpgk
Adap2
Creld1
Selenbp2
Pdlim5
Jarid2
Trappc3
Net1
Dbi
3110009E18Rik
Foxq1
Dmxl1
Mterf1b
Isoc2a
Actn4
Skp1
Dnajb4
Dnajc3
Ddost
Zfp36
Stard5
Parp10
Grina
Ren2
Ren1
Hmga1b
Hmga1
Dusp6
Scarb1
Stra8
Ankrd11
Pcna
Pabpc1
Nrd1
Slc30a9
H3c13
H2bc18
Scp2
Actg1
Ulk1
Rbm4b
Atp5g3
Plpp1
Cotl1
Ddx3x
Ahcy
Ankrd39
Hnrnph1
Preb
Fth1
Lipg
Kcnk5
Endog
Cry2
Mrpl1
Mtfr1
Tmc5
Kmt5b
Hsph1
Ost4
Jup
Map2k1
Ankrd37
Dync1h1
Oxtr
Tle1
Spg11
Osgin1
Impdh2
Gadd45g
Ptprk
Arhgap29
Hspa1b
Tdo2
Tpi1
Wdr83os
Wdr83
Man2b1
Ripk2
Ostc
Cpeb2
Trp53i13
Pdk2
Abhd15
Atp2a2
Itpr1
Txn1
Rbbp6
Dip2b
Atl2
Dynll2
Rtn3
Pygl
Fech
Larp1b
Nedd9
Zfp963
Cap1
Map2k4
Ggcx
Dnajc1
Cldn3
Ptms
Rsrc2
Kntc1
Glce
H3c6
Glrx5
Pitpnc1
Paxip1
Pdcd4
Xylb
Bsg
Hdlbp
H4c11
Tnfrsf1b
Pnp
Dhcr24
Bahcc1
Mafk
Abca1
Ccdc117
Ero1b
Foxo1
Rnf38
Sptan1
Irf6
Lrrc8a
Iffo2
Pcif1
Daam1
Alcam
Il31ra
Mapk8
Slc27a2
Hao1
Clec2d
Crot
Fn1
Znrf2
Macrod1
Ulk2
Tiparp
Pik3c2a
Pdhb
Plcb1
Tbc1d13
Pikfyve
Idh1
Acap2
Abtb2
Serinc3
Hif1a
Dus1l
Slc6a4
Mogs
Litaf
Hspa1l
Hspa1a
Slc66a1
Akr7a5
Acad12
Edem1
Zfp568
Erf
Pik3r1
Map4k5
Atl1
Smad7
Dhx9
Kdelr2
Sirt4
Atg4d
Slc20a1
Nt5dc3
Tuba1c
Pih1d1
Aldh16a1
Hmgcs2
Abca14
Prss35
Crym
4833420G17Rik
Creld2
Alg12
Cpm
Lifr
Tpt1
Sgk1
Aadacl2fm1
Tmem205
Ccdc159
Map3k12
Zswim3
Acot8
Tarbp2
Farp2
Apob
Etv5
Ctbs
Akap8l
Rps15
Apc2
Ubr2
Stx16
Ptpn1
Ces1c
Cep43
Jag1
Gpt2
Ephx2
Hmox2
Eif3a
Dhcr7
Nadsyn1
Esyt2
Fam207a
Azin1
Sh3bp2
Tgm2
Pxmp4
Fads2
Gch1
Hbegf
Pdlim7
Aldoa
Cpt2
Serpine1
Pkd1
Pdhx
Apip
Hacd2
Sec61a2
Fmo5
Dnajb2
Gadd45b
Selenok
Nfam1
Efna1
Atp5b
Pim3
Wwox
Mrpl44
Baiap2l1
Chordc1
Stat3
Lbh
Csrp2
Sertad2
Rab5b
Usp42
Slc26a2
Pcx
Itch
Wdr3
Pgrmc1
Rfk
Ubxn6
Ptk2b
Pklr
Hdgfl2
Fam20c
Epc1
Klf2
Mavs
Cstf2t
Srp9
Errfi1
Gnai2
Txnl1
Chka
Ccno
Ppia
Alg1
Mxd4
Nme1
Nsrp1
Urgcp
Hgsnat
Gstp2
Rpl7a
Med22
Ero1a
Retsat
Elmod3
Raly
Gstp1
Bach1
Arid3a
Pkn2
Manf
Rbm15b
Tmbim6
Ttyh2
Sec22b
Ncoa4
Nars
Otud3
Eef2
Tle4
Drg2
Slc25a33
C3
Dlc1
Pdia6
Cldn11
Map2k2
Gzf1
Tfrc
Fam131c
Rps6
Ssbp1
Arl4c
Trim25
Onecut2
Scnn1g
Bms1
Trabd
Mbtps1
Etfrf1
Casc1
Ivd
Styxl1
Mdh2
Pank2
Sh3glb1
Plpp3
Acsl1
Abcb10
Tnrc6b
Aldh2
Srp19
Hnrnpa0
Kyat1
Srsf4
Fam53a
Cyp27a1
Tex45
Pex11g
Fh1
Tti2
Top1
Zyx
Pi4k2a
Morn4
H2-Q10
Fkbp4
Napepld
Ptma
Amacr
Mtr
Selenos
Mtnr1a
Zranb1
Slc25a22
Ctdp1
Gm15517
Sertad1
Fgfr3
Abhd6
Ppdpf
Paip2
Hmox1
Dlgap4
Txnip
Rab33b
Tmem199
Poldip2
Rabgef1
Psap
Arrdc3
Mapk1
Rapgef6
Rpl3l
Pnrc1
Msrb1
Il17b
Rcbtb1
Mfsd14a
Cdc42
H2-L
H2-D1
Ints8
Serpina1b
Kif1c
Inca1
Icam1
Xrra1
Spcs2
Ppp2r5d
Them7
Aldob
H2bc4
H2ac6
Tmem60
Phtf2
Smtn
Rhpn2
Hmgcl
Fbrsl1
Mpc2
Dcaf6
Eif1
Mylip
Tgoln2
Tgoln1
Klhl24
Shb
Phyh
Gpx4
Coro1b
Fra10ac1
Prodh
Ndfip1
Nfyb
Eprs
Mrpl39
Diaph1
Abcd3
Tmem107
Gtf3c6
Plcd3
Acbd4
Slc18a1
Atp6v1b2
Dnm2
Evi5
H4c12
H2bc15
H2ac15
Spry4
Atp10d
Safb2
Safb
Fam222a
Pcyt2
Becn1
Zbtb8os
Rbbp4
Smad1
Samd1
1700067K01Rik
Sod1
Tpst1
Sp1
Dtwd2
Als2
Klf3
Efnb1
Hmgcs1
Hagh
Fahd1
Eif4ebp2
Arih1
Mbd3
Ppib
Atad2b
Serf2
Sned1
Hykk
Slc12a7
Selenbp1
Pigl
Ncor1
Dstn
Gjb2
Slc3a2
Ssh2
Slc38a3
Rpl22l1
Baz1a
Uspl1
Rps2
Rnf151
Ndufb10
Hmgcr
Fzd7
1810013L24Rik
Ccin
Map1lc3b
Tmem126a
Maf
Rplp0
Pfn1
Eno3
Cpsf1
Ets1
Pnpla8
Hook2
Zfp526
Dedd2
A130010J15Rik
Map7d1
Agtr1a
Srsf6
Clp1
Tatdn1
Ndufb9
Vta1
Dglucy
Ube2g1
Epas1
Taf1d
4931406C07Rik
Rps9
Arhgap21
Alas1
Plag1
Stau1
Gls
Bcl2l1
Tmx4
Plscr3
Rpl23
Nfe2l2
Atp1b1
Brap
Acad10
E4f1
Prkar1a
Dgat1
Ankle1
Ssna1
Anapc2
Eif3j2
Eif3j1
Amz2
Cth
Xrcc6
Desi1
Sgpl1
Myo10
Rpl24
Amotl2
Rras2
Irf2bp2
Ccng2
Fam107b
Ext1
Prxl2c
Foxc2
Zmym2
Pxn
Bzw2
Ankmy2
Zfp213
Zfp574
Grik5
Cdc34
Ppp3ca
G3bp2
Mrpl20
Ddt
Comtd1
A430057M04Rik
Flcn
Tmem14c
Slc11a2
Lpin1
Cnbp
Tmem123
Wdpcp
Mdh1
Orai1
Zfp1
Pnrc2
Zfp446
Ksr1
Tpm1
Serpina3m
Chd9
Rad51d
Fndc8
Golga1
Cycs
Ptbp1
Tomm40l
Lrrc63
Lcp1
Apoa2
Rcn2
Aacs
Efhd2
Odc1
Med21
Wdr45b
Sdc4
Pms1
Ormdl1
Arid4a
Xbp1
Otud1
Pitpna
Epb41
Oaz1
Edem3
Ptp4a1
Slc30a5
Sec61a1
Tcim
Smg1
Akap13
Zfp800
Cep85l
Arid5b
Acvr1b
Sema3b
Napa
Slc7a5
Tmed9
Pspc1
Garem1
Wdr89
Hdac1
Rpl8
Commd5
Rpl36al
Mgat2
Midn
Arl4a
Cox5a
Atf4
Cpsf6
Klhdc10
Cyp4a10
Cbln3
Cdk13
Gnmt
Tmem79
Smg5
Ccnl1
Tmem169
Tfcp2
Sdhaf3
Ppp1r3b
Pecr
Rpl11
Vps52
Rps18
B3galt4
Pitpnm1
Cdk2ap2
Cyp3a13
Bmt2
Cdkn1a
Fnbp1
Cgnl1
Sacm1l
Tomm70a
Tm9sf2
Them4
Ubr3
Oga
Stard3
Tubb2a
Primpol
Casp3
Tagap1
Lap3
Abcc10
Pafah2
Arg1