ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416188 | Embryoid Bodies
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◢ Hoxd9: Average

◢ SRX7416187: Embryoid Bodies

◣ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Pcnx3
Map3k11
Hoxc5
Prdm13
Khdc4
Hoxa4
Crb1
Rbm25
Ttll11
Osbpl9
Hoxd3
Hoxb4
Hoxc4
Arfgef1
Tmem97
Cux1
Wdr7
Mbnl1
Itch
Scn1a
Zfp473
Vrk3
Gask1b
E4f1
Hoxa5
Ngdn
Hes3
Ccdc174
Nudt1
Mrm2
Lmbr1
Poglut3
Chst12
Sumf1
Vamp9
Rabl2
Dynll1
Men1
Poc5
Clasp2
Galk2
Cops2
Ric8b
Ss18l2
Slc7a1
Cnr1
Egr2
Zfp503
Zfp945
Cachd1
Hoxb5
Bbs2
Hibadh
Atg2a
Elmo2
Gcnt2
BC051142
Nacc2
Kmt5c
Mrpl33
Ubp1
Hsdl2
Oxnad1
Dph3
Phpt1
Rabep2
Fam181a
Pth1r
Setd4
Zc4h2
Olfr298
Wnk1
Caml
Krt9
St3gal2
Med25
Sf3a2
Plekhj1
Mutyh
Hes1
Tshz3
Cnot3
Cryzl2
Crp
Spata7
Ell
Ttc1
Ggn
Celf3
0610009B22Rik
Acot1
Tlk1
Stox2
Lrrtm2
Fmc1
Rab18
Got2
Cad
Lysmd3
Gnat3
Ift46
Rnf44
Lrrfip1
Sdhaf1
Kbtbd8
Cmtr1
Eif4g2
Asf1b
Hoxa2
Trrap
Hmox1
Adipor2
Tnks2
Fbxo16
Aktip
D630045J12Rik
Gfod1
Esrrg
Vps29
Rad9b
Tcerg1
Itgb8
Coq7
Pacrgl
Smarcal1
Actn4
Lta4h
Agfg1
Ankrd6
Zfp628
Dcaf12
Lrrcc1
Tti2
Rhob
Eif2s3x
Grrp1
Slc25a42
Tom1l2
Drc3
Abca7
Efna3
Oacyl
Mybpc1
Ehbp1
Amer2
Dcaf11
Mpp3
Lhpp
Eci1
Rack1
Zfp143
Apcs
Evi5l
Serinc1
Cyp19a1
Mvb12a
Fbxw7
H2bc22
H2ac22
Phactr3
Dennd5b
Ptger2
Lin28b
Dhrs7b
Ajuba
Pyroxd1
Gpn3
Fam216a
Nol6
Ndufs5
Msh5
Sox6
Zfp689
Foxo3
Pclaf
Skida1
Tbc1d10b
Mylpf
Atp6v1g1
Fgd4
Sgpp1
Mrps36
Prdm10
Cntf
Klf3
Etv3
Tshz2
Osbp
Vkorc1
Ppp1r9a
Elavl2
Snx5
Mgme1
Rps23
Sc5d
Ogfod3
Hexdc
Atg4c
Mbd3
Cntrl
Nr4a2
Snx30
Snx15
Dnm2
Pum1
Hspa9
Limch1
Myo1b
Tdp1
Efcab11
Tgif1
Nap1l4
Ndufs2
Zfp710
Zfp512b
Snrpc
Sox1
Alkbh5
Sos1
Rnf220
Myo9b
Haus8
Hoxa9
Triobp
Rbm5
Haus4
Wdyhv1
H6pd
Nop53
Sh3bp5
Ap3m2
Gapvd1
Usf3
Myo10
Postn
H2az2
Rnf111
Lpar4
Tcim
Cxxc5
Nfam1
Abcg2
Snap25
Zfp536
Sp5
Glce
Hpgd
Slc25a25
Eef1akmt1
LTO1
Lbr
Trio
Repin1
Eif3c
2010315B03Rik
Manea
Acyp2
Ppan
Dhx16
Nedd9
Arid3a
Garre1
Rab28
Psap
Chchd5
Lsm6
Cops3
Wdr6
Maf
Hoxb9
Zfp708
Nup107
Rtcb
Dad1
Abhd4
Slc35f2
Vmo1
Spcs1
Glt8d1
Calml4
Naxd
Stk33
Rufy3
Ppp2r2b
Kif21a
Rai1
Fignl1
Selenof
Hs2st1
Npc2
Isca2
Nrxn1
Smug1
Hddc3
Stat3
AB010352
Daam2
Spag9
Uba1
Rab33b
Nell2
Pik3ca
Acod1
Nr2f2
Ccdc42
Rnf122
Mtmr6
Uts2b
Atp5l
Slc9a7
Lars
Tbp
Nr2f1
Zdhhc16
Exosc1
Gm3448
Gm3417
Ttc21b
9030025P20Rik
Pvr
Commd1
Zrsr1
Nebl
Zfp354b
Bco1
Rnf10
Zfp334
Zbtb18
Smarca2
Srpk2
Nub1
Spp2
Foxj2
Aplp2
Ano3
Erbb3
Ica1l
Sall1
Vps4b
Stxbp5
Rbm39
Tpm3
Zfp146
Ankrd40
Rbl2
Dhx9
Vamp1
Trim67
Mllt10
Prickle2
Rnf4
Atp5o
Fer
Zfp672
Wdr41
Mad2l2
Draxin
Elk1
Arfgap2
Eif3f
Pik3r1
Mrps14
Meis2
Pkd2l1
Dipk1a
Urm1
Zcchc17
Snrnp40
Xlr3b
Tcea3
Tia1
Dnaja3
Auts2
Dct
Lama1
Tfpt
Prpf31
Crebrf
Lrp8
Vash1
Rcan2
Tatdn1
Ndufb9
Supt7l
Slc4a1ap
Baz1b
Fosb
Klhl9
Mrfap1
Alyref2
Cenpj
Mterf4
Pax2
Tex14
Ank3
Zkscan1
Rarb
Gabpb2
Miip
Fv1
2310033P09Rik
Tmem11
Zfp84
Serpinb8
Rpl3
Kifap3
Tmem100
Natd1
Ecpas
Shoc2
Bbip1
Taf4
Cklf
C2cd5
Iftap
Schip1
Insr
Fbln1
Actr1b
Car14
Elavl4
Tent2
Tcte3
Ermard
Exoc1
Mapk1
U2af2
Tfb1m
Gpr19
Otx1
Akap11
Frmd4a
Map2
Tbc1d10c
Ppp1ca
Samd4b
Gmfg
Zfp51
Radil
Prkag1
Tyk2
Vill
Lnpep
Gm6712
Celf2
Gm3435
Alg9
Dhcr7
Gm5165
Hyal2
Tmc6
Mrpl4
Ccdc9
Scp2
0610010F05Rik
Sall4
Pofut2
Usp4
Neurog2
Zfp521
Rnasel
Dnajb5
Pxmp4
Grb10
Tspyl2
Shcbp1
Unc13b
Ufsp2
1700029J07Rik
Tsen34
Mboat7
Kif3b
Nsg2
Wdr5b
Tecr
Arg1
Aebp1
Zfand2a
Ppp1r14c
Mfge8
Tubb4b
Fez1
Ccng1
Shc1
Cks1b
Csf2ra
Krt222
Trappc4
Rps25
Hgh1
Akirin2
Gm3667
Hikeshi
Cdc45
Arid4a
Cfdp1
Ednrb
Esyt1
Kbtbd6
Fbxl7
Oscar
Ndufa3
Dus1l
Slc25a18
Trim23
Trappc13
Shld3
Cdh9
Elp6
Map3k4
Sgo1
Ralyl
Zc3h6
Gpr12
Zfp318
Stac
Chst2
Micu3
Cenpc1
Flad1
Cabp1
Prr5l
Trp53bp2
Bbc3
Agk
Tut1
Spata48
Rnase1
Npff
Ccp110
Aven
Tmem60
Phtf2
Arhgap36
Rab40c
Cotl1
Tppp3
Mpped2
Mrps18a
Zfp58
Ngef
Neu2
Polg
Psmc4
Phf5a
Aco2
Acss2
Rap2b
Hoxb3
Os9
Map1b
Cdca7
H4f16
Leo1
Umad1
Rpa3
Nubpl
Scd1
Eaf2
Chd4
Ppm1k
Zbtb39
Ahi1
Pgk1
Maz
Armc3
Cox20
Rfx4
Ddx39b
Ccdc107
Tro
Ptch1
Top3a
Smcr8
Zscan2
Slc25a39
Rab13
4931428F04Rik
Tulp3
Setx
Zfp865
Spock2
Ints6
Ing3
Hpgds
Nmnat3
Sgf29
Hoxb1
Sertad3
Ppt1
Gucy2g
Usp14
Mapk6
Armc1
Bckdk
Mettl4
Oip5
Nusap1
Arid1a
C330007P06Rik
Atp6ap2
Cdk19
Gcat
Vstm2l
Cpeb3
Smc3
Glul
H2bc6
H1f4
Tcf20
Usp48
Hoxa3
Ints9
Hmbox1
Taok3
Nt5c3
Rps14
Rab5b
Chac2
Ric8a
Bet1l
Ift43
Psip1
Klhdc4
Bcar3
Dennd1b
Usp40
Snx32
Brf2
Anxa2
Mn1
Shroom2
Rfx1
Zfp422
Klhl5
Meis1
Sdccag8
Cep170
Zbtb5
Cct5
Atpsckmt
Pcm1
Use1
Ccpg1os
Ccpg1
Stil
Mov10
Nfkb1
Fam222b
Ndst4
Fam110a
Ropn1l
Car3
Wipi1
Kcnip2
Art3
Grina
Ska2
Prr11
Smpd1
Ube4b
Dpy30
Hoxd8
Psmd5
N4bp2
Map9
B9d1
Zfp960
Rangap1
Psmb8
Kcne1l
Eps8
Zc3h8
Slc9a6
Phc2
Stoml2
Mapkapk5
Pole3
4933430I17Rik
B230307C23Rik
Sh3pxd2a
Nfyc
Slc25a51
Knl1
Ranbp2
Necap1
Uqcrc1
Rab11b
Wrn
Purg
Dusp23
Cul2
Rab3gap1
Dchs2
Igf2bp3
Xrcc5
Epc1
Gramd1a
Stt3a
Srsf7
Sp2
Pbx4
Prnp
Prn
Tcta
Rhoa
Fam160a1
Snd1
Slc27a1
Arl13b
Zfp707
Tefm
Nemf
Ahcy
Tceal8
Btf3l4
Ehd4
Spata25
Mospd3
Mtnr1a
Cdk6
Zfp68
Prex2
Supt6
Kat6b
Mobp
Ncoa7
Btbd8
Atg10
Rdh11
Ikzf5
Acadsb
Tstd2
Ncbp1
Ets2
Zfp869
Azin2
Hexim2
Galnt7
Chaf1b
Gid4
Tmem186
Pmm2
Sh3gl3
Pknox1
Cdr2l
Acot11
Aasdh
Tbc1d23
Srrd
Hps4
C1qtnf3
Arpc5l
Slc16a7
Rbm33
Xab2
Pet100
Eif2b2
Trim63
Tgfbrap1
AI597479
Wfikkn1
Ndufaf4
Tmem167b
Ogdh
Hook1
Gtpbp1
Prim1
Tmem175
Gak
Camsap2
Ptma
Abr
Lgr4
Thoc1
Mpv17l
H3c6
Hps5
Gtf2h1
Mmachc
Ccdc163
Serpinb6a
Ripk1
Xpnpep3
St13
Arhgap9
Stac2
Lingo4
Tle4
Cluap1
1700037C18Rik
Mrnip
Akr1e1
Zc3h12c
Selenop
Tcf12
Hspa12a
Kif2c
Fam174b
Tmem260
Gabrg1
Ints14
Tm9sf4
Ddx5
Cep95
Efr3a
Zfp608
Katnb1
Rdh14
Tesk2
Glipr1l3
Gtf2h2
Fzd10
Jhy
Cutc
Cox15
Psat1
Zfp384
Eef1a1
Ntng1
Zfp141
Shh
Xrn1
Ppm1b
Prmt8
Ppil1
Smyd2
Slc46a3
Plxnb1
Leng9
Insig1
Eda2r
Kcnn3
Cldn1
Art5
Btbd1
Fbxo47
Gm4791
Sdcbp
St6gal1
Fzr1
Grb2
H2bu2
Bmpr1b
Txnrd3
Hyou1
Tbcb
Polr2i
Ptprq
C9orf72
Gfus
Ccdc60
Flywch1
Adh1
Jmjd1c
Cox6c
Calr3
1700030K09Rik
Rnf43
Qars
Deptor
Hoxb7
Srbd1
Lsm4
Prcp
Ddias
Gng2
Chmp1b
Lyst
Ctps
Rpl5
Afdn
Tomm20
Ift74
Rlf
Atf4
Fam135a
Vcp
Ccdc30
Zkscan5
Tal2
Ubxn6
Hdgfl2
Cks2
Slc2a5
Ckb
Npepps
Mocs2
Uba52
Ptp4a1
Ssbp3
Ten1
Acox1
Tmem184c
Fryl
Psmg1
Rnf40
Ccdc189
Zfp938
Wipi2
Ccna2
Ppm1a
Angpt1
Nanp
Septin3
Aftph
Rps6ka2
Tmem126a
Taf8
Fam13c
Tmem178
Dennd6a
Uba6
Dnah5
Ubr2
Fam110b
Ssc5d
Rab27b
Ccz1
Gm3325
Tnfrsf14
Kcnh2
Gtf3c6
Rbfox2
Prickle1
Ttc23
Katnal2
Nmd3
Iqgap1
Ip6k2
Nsrp1
Nudt15
Tmem160
Ttc3
Pigp
Prkd3
Utp15
Ankra2
Gsk3a
Olfr598
Immp1l
Elp4
Dlg4
Adh5
Tube1
Fam229b
Gm10406
Ino80b
Tnrc6b
Uggt1
Smarcad1
Enkd1
4933405L10Rik
Ferd3l
Zbed5
Tmed3
Slc25a1
Hdac9
Crtac1
Vxn
Polr3gl
Cstf2t
Tmem209
Ssmem1
Dynlt1b
Zfp563
Tshz1
Rdm1
Kif22
Tctn2
Mt3
Tma7
Ccdc51
Scube3
Rpia
Sat2
Atp6v1h
Ctso
Akap1
Zbed3
Pramel12
Fam13a
Elovl5
Nans
Tmco6
Ndufaf3
Jakmip2
Scgn
Timp2
Kctd9
Cdca2
Vps11
Trib2
Nus1
Scml4
Gm51425
Slc25a23
Mettl26
Tprkb
Nat8f1