ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416187 | Embryoid Bodies
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◢ Hoxd9: Average

◣ SRX7416187: Embryoid Bodies

◢ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Hdx
Riox2
Prdm13
Ngdn
F11r
Hoxa4
Alb
Gpr84
Zc2hc1c
Acyp1
Ubl4b
C1ql3
Slc37a3
Rab19
Slc5a12
Map4k5
Atl1
Hoxc6
Hoxc5
Acsf2
Hoxc8
Synpo
Dpyd
Pomc
Gm973
Otp
Gtf2h4
Arhgap28
Zfp503
Notch1
Zfp473
Vrk3
Mmrn1
Atp1b4
Pkdcc
Hoxb6
Hoxb5
Slc9b2
Hoxb4
Hoxb3
Prickle1
Trim59
Grap2
Efnb2
Speer4a
Nkx6-1
Pdlim5
Gpatch2l
Gcnt2
Hoxd8
Hoxd4
Hoxd3
St3gal2
Psd3
Irx1
Ffar4
Ccdc182
Hoxc4
Rarb
Kif13b
Maml2
Hoxa2
Hoxa1
Hoxb7
Hoxb8
Ece1
Meox1
Csrp3
Lpgat1
Hes3
Gnat3
Rbp2
Dmrt3
Ttc30a1
Nkx2-2
Hoxa6
Hoxa5
Hoxa3
Hoxa7
Crkl
Cbfb
Srpx
Mdm2
Cdca8
9930104L06Rik
Gm527
Ttc39b
Copz1
Epha5
Rnf165
Olfr572
Olfr571
Tmem268
Atp6v1g1
Tlk1
Ifrd1
Ociad2
Alox5ap
Ttr
Dnajb13
Prkar2a
Foxn3
Itgb8
Cxxc4
Elf5
Fam174a
Slc31a2
Arfgef1
Zadh2
Tshz1
Btg2
Tspan14
Calcrl
St8sia4
Trio
Thumpd3
Cited4
Nap1l1
Tjp2
Apcs
Mab21l2
Map4
Mad2l2
Draxin
Clasp2
Plpp6
4430402I18Rik
Iigp1
Tox3
Ncoa7
Rbm25
Cntnap2
Tbc1d22a
Psmd12
Pitpnc1
Cox7a2l
Glrp1
Neurod4
Kcnip1
Dll1
Nrg1
Tshz3
Csrnp3
C330018D20Rik
Pcnx
Dtx4
Bend4
Galnt14
Dhx8
Sv2b
Dnm2
Olfm2
Nkx2-9
Dock3
Bahcc1
9430069I07Rik
Prkar2b
Iqca
Rhcg
Cradd
Rtn4rl1
Crp
Foxp2
Slc9a9
Myo10
Dip2b
Baalc
Sox21
Lrg1
Sema6b
Cpsf1
Ntn1
D6Ertd527e
Wt1
Ccn1
Radil
Krt222
Nr3c2
Tceal7
Gpc6
Foxp1
Mllt3
Slc27a4
Mbnl1
Higd1c
Pla2g2d
Crlf2
Hhat
Kank1
Gm18905
Gm15517
Acp4
Mpv17l
Pdxdc1
Dph5
Iglon5
Gm4737
Hipk3
Kmt5c
Lemd2
Wdr18
Myo1d
Skap2
Th
Atg4c
Cep128
Cacnb2
Pold3
Akap6
Dap3
Tnfsf13b
Gfra3
Meis2
Sgpp1
Oxnad1
Dph3
Cmtr1
Map1b
Gm4791
Hhip
Plxnc1
Scn1a
Vta1
Skida1
Mllt10
Rnf220
Pik3r4
Palld
Prrxl1
Percc1
Ccdc154
Phc2
Adipor2
Mcub
Fam135b
Rara
Ndnf
Bmp7
Dst
Lpp
St8sia2
Dach2
Pcnx3
Map3k11
Oacyl
Sptssa
Olfr646
Atp5g2
St6galnac1
Ccdc136
Lyrm9
Ncam1
Tob1
Mbp
Ivd
Trim23
Trappc13
Shld3
Cit
Cxcl12
Phactr3
Tph2
Vapb
Smim8
Bzw1
Zfp143
Scube2
Pou3f2
Ing3
Rtl1
Actn4
Lipo4
Mecom
Col4a2
Clasrp
Prmt3
App
Cbfa2t3
Snca
Sox6
Enpp3
H4c11
H2bc14
Phox2b
Mapre1
Ptprd
Tbc1d10b
Septin1
Mylpf
Hsdl2
Lysmd3
Elmo2
Hnrnpa1l2-ps2
Tpm3
Sqor
Trib2
Emcn
Ifna9
Tmem53
Tmigd1
Fmo2
Dach1
Iffo2
Cd83
Hpf1
Arpp21
Thrb
Aff3
Gprc5d
Hivep2
Cemip2
Pik3r5
Got2
Lgi1
Psmg2
Cep76
Sema6d
Eif2s3x
Rab27a
Josd1
Gtpbp1
Tti2
Rgs5
Vdac2
Add2
Rps26
Crb1
Dusp5
Slc6a1
Xpr1
Utp4
Derpc
Chtf8
Mapk9
Grem2
Kif2c
P4ha3
Ermn
Efcab5
Chchd5
Tox2
Smad1
Zfp703
Slc44a3
0610009B22Rik
Zfp423
Pex5l
Mycl
Pax8
Acot1
Casp7
Kdm8
Rps23
Asb5
Kbtbd13
Cyp19a1
Tle3
Hand1
Ccdc60
Gcc1
Arf5
Epb42
Pum1
Nr0b1
Adtrp
Aven
Nsg2
Fbxo28
Ivl
Smcp
G2e3
Mfsd9
Gja10
Casp8ap2
Tmem156
Etv3
Iqsec1
Tnrc18
Ccdc174
Aktip
Pakap
1700010B08Rik
Tbc1d9
Stxbp6
Asap1
Clmn
Pou3f3
Ppp3ca
Gpx2
Erich6b
Ccdc187
Tnfaip8l2
Rprml
Lyzl6
Kifc3
Narf
Cybc1
Asic4
Rab30
Stox2
Tcim
Mrps33
Epsti1
Marchf4
Ip6k3
Nup107
Lta4h
Fbxo16
Igf1
4930550C14Rik
Pbx1
Olfr298
Pex2
Ythdf3
Zkscan1
Cubn
Ncoa5
Slc22a1
Galr3
Meis3
Zfpm1
Cd9
Zfp330
Egr2
H6pd
Scrn1
Dus1l
Ccdc33
Pdia5
Adgrv1
Zfand3
Spp2
Col6a4
Gm21698
Gm21671
Gm21663
Gm10471
5031410I06Rik
Ormdl3
Lrrc3c
Nipsnap1
Pou1f1
Megf10
Pou4f3
Kcnip2
Foxf2
Mthfd2
Mob1a
Plaa
Gm12657
Tmem260
Gm14092
Ccbe1
Fgd3
Capn8
Tle4
Mnx1
Pik3r1
Grpel2
Glp1r
Rps29
Marveld3
Xaf1
Prtg
Slc35d3
Akain1
Robo2
Tom1l2
Drc3
Smug1
Lin28a
Arglu1
Atrn
Ccdc171
Dad1
Abhd4
Gtf2ird2
Zc3h12c
Aebp1
Tspan5
Lrrtm2
Zfp326
Primpol
Casp3
Ikbke
Slc4a8
Sox5
Clec2d
Fam78b
Galnt9
Lck
Mgat5
Rragd
Celf4
Tmem178b
Ncf1
Abcc4
Ppp2r2a
Ppp1r15b
Fyn
Gucy1a1
Chrna4
Zyg11b
Tial1
Garre1
Map6
B3galt1
Sfmbt2
Egln2
Cyp2t4
Egfem1
Rnase12
Rnase11
Thsd4
Inka2
Ddx20
Cd96
Mrpl23
Fam181a
Olfr1441
Gphb5
Cyren
Ctsf
Cda
Dars
Toe1
Mutyh
Hpdl
Elavl4
Vamp9
Zfp945
Mfng
Tub
Rps10
Ppp1r9a
Nol4l
Supt6
Sdf2
Olfr1385
D1Pas1
Arrdc4
Nme6
Zdhhc2
Mfsd10
Apela
Srgap3
Sertad4
Rad54l
Tex14
Prkn
Pgm2
Taf12
Gmeb1
H2bc6
H1f4
Atic
Rprm
Ccnd1
Papss2
Tubb6
Tatdn2
Scmh1
Olfr1098
Rpgrip1
Lrfn2
Lpo
Mki67
Rtn1
Sgcd
Eps8
Bcas1
Nin
Spock2
Gse1
Hagh
Fahd1
Hnrnpl
Ech1
Fbxw15
Dip2c
Fam204a
Foxn4
Art3
Unkl
BC003965
Zfp292
Megf9
Tpbg
Aqp8
Ubqln2
Susd1
Pkd2l1
Cnot2
Tcerg1
Pfas
Ctc1
Dipk1a
Ajuba
Zfp608
Stra6
Wbp11
Smco3
BC049715
Srbd1
Sirt4
Stk33
Flrt1
Srprb
Cacng5
Zbtb46
Upp2
Hapln1
Myl7
Rec114
Plekha6
Cfl2
Zfp672
Sh3bp5l
Insyn2a
Parl
Nms
Zfp664
Ccdc92
Skil
Tmem132b
Trpc7
Lpar4
Mup5
Angpt4
Best3
Dnajb5
Gucy1b2
Krt9
Scrt2
Ripply1
Fat3
Olfr71
Cux1
Nacc2
Cacna2d1
Vmn1r53
Drd2
Ebf1
Adcy2
Aqp6
Tmem200b
Lama5
Ciao3
Nebl
Mef2c
Ptprj
Kbtbd6
Evi5l
Nkain2
Gtf2a1
Srpk2
Rptor
Emp3
Ccdc114
Cdk17
Ebf3
Nav2
Cryzl2
Dyrk3
Sorbs1
Zbtb34
Ascl1
Evx1
Gpr132
Fam234b
Fshb
Lrrc36
Ngef
Neu2
Plcd3
Acbd4
Enho
Jakmip2
Metrn
Fbxl16
Sp9
Gga2
Zbtb10
Sumf1
Lrrn3
Purb
Btbd3
Ttyh3
Cd40lg
Pgbd5
Slc30a9
Fgl2
Sh3pxd2a
Prkg1
Rhbdd1
C1qc
C1qb
Nell2
Them7
N4bp2l1
Zc3h3
Eri3
Lrrn2
Dpt
Crybg3
Mafa
4933424G06Rik
Il20rb
Tro
Slc25a42
Zfhx4
Sybu
Mrfap1
Exoc5
Ap5m1
Ccdc170
Alpl
Schip1
Fer
Lin28b
Lrrc4c
Slc6a17
Usp21
Ufc1
Vkorc1
Prss53
Bckdk
Slc35f6
Cavin4
Cntn1
Srxn1
Poc5
Scarb2
Prkd3
Zfp775
Repin1
Gm5111
Dnah5
Polr3gl
Lix1l
Ankrd34a
Smarcal1
Arg1
Ccl26
Cdhr3
Ankrd40
Kmt5a
Nhlh2
Muc6
Cacna1c
Ttc7b
Cfap58
Olfr102
Olfr101
Olfr100
Myt1
Ddx1
Tmem167b
Postn
Abr
Lypd10
Lrrfip2
E4f1
Foxj2
Shd
Fsd1
Tmem144
Txndc11
Glis2
Upf2
Sema4b
5730409E04Rik
Fbxw25
Nmnat3
Gm4922
Wdr6
Dalrd3
Ear10
Prdm6
Rora
Ski
Sos1
Rab28
Mtarc1
Dhx16
Epb41l4b
Adam12
Ptpn3
Lrrcc1
Mtcl1
Bcap29
Tcf7l2
Fam117a
Galk2
Cops2
Ksr1
Adnp2
Epb41
B3galt2
Ranbp9
C1qtnf2
Slc43a1
Qrfp
Gpr1
Pth1r
Tcf21
Cdk19
Zc3h8
Rgs3
Kif21a
Zdhhc16
Exosc1
Fbxw7
Adora2a
Crtam
Epn2
Vps41
Prdm2
Clptm1l
Ptger2
St18
Leng9
Trim56
Ppp1ccb
Ttc1
Gm14137
Gchfr
Pyurf
Lancl2
E130308A19Rik
Exoc2
Crb2
Phpt1
Mamdc4
Ajm1
Pabpc4l
Rab5c
Cyp2s1
Tnks2
Lrrc4
Hlcs
Selenoi
Runx1t1
BC107364
Nr4a2
Crmp1
Treml4
Inpp5f
4933402D24Rik
Manbal
Rab11fip5
Stk32a
H4c14
H3c13
H2bc18
Nt5c2
Cux2
Dbx2
Cmtm8
Lhx1
Slc2a10
Pabpc6
Cntf
D430041D05Rik
Hoxd9
Gmnn
Ralbp1
Rhbg
Ndufc2
Abra
Uncx
Wdr7
Ubl3
LTO1
Fam13c
Fra10ac1
H4c2
H4c1
H3c2
H3c1
H2ac4
H1f1
Wipf1
Angptl7
Tecta
Actr3b
Aftph
Cbx2
Mpp7
Pdpn
C2cd5
Epb41l5
Asb8
Tra2b
Zpbp
Spata48
Jrk
Tmed10
Znrf4
Alkbh5
Mprip
Fggy
Nrxn1
9330182O14Rik
Zic5
H4c8
H3c8
H2ac10
Urm1
Tmem107
Avpr1a
Kansl1l
Mtif3
Slc25a51
Flnb
Slc1a3
Klhl5
Tmem100
Ackr4
Fzd8
Asxl3
Epc1
Sall1
Coq10a
Ankrd52
Mrps36
Sh3bp5
Cnot1
Adrm1
Slc24a1
Ints14
Tmtc1
Pacrgl
Nudt15
Rabl2
Upk3bl
Nkx2-6
Osbp
Wnt1
Ddn
Fzd10
Nedd9
Krt20
Tex24
Gng2
Fis1
Rapgef6
Man1a2
T2
Zfp334
Hs3st3a1
Qsox2
Mlip
Fam222a
Gpr160
Rufy3
Tubb2a
Ube2o
Nrxn3
Col6a6
Tbl1x
Sinhcaf
Cwc27
Ssr3
Adh6b
Nr2f2
Arntl2
Kcns3
Syk
Ctif
Slc5a11
Tle1
Mtnr1b
Rusf1
Gtsf1l
Racgap1
Spink7
Sdc1
Phgdh
Lamc2
Mn1
Mobp
Serpinb8
Apobec2
Tspo2
Mrap
Lypd1
Zfp41
Natd1
Tenm3
Sobp
Qk
Ndufb4c
Syngr1
Rpl3
D7Ertd443e
Btbd8
Atxn7l3b
Atp8b4
Gnb5