ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1054887 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◣ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Mindy4
Nufip2
Zfp800
Med25
Nhsl1
Dhx32
Mrpl28
Pcyt1b
Eif5a2
Stk11ip
Rspry1
Psme3ip1
Pou2f1
Lrrn2
Abca4
Tnrc18
Rabl3
Gtf2e1
Il18
Bco2
Mlc1
Dhrs3
Msi1
Eif1ad
Banf1
H4f16
Phf23
Cpsf6
Zfp623
Surf6
Slc45a3
Kazald1
Fgd4
Vldlr
Prdm12
Ptbp1
Mmut
Cenpq
Polr3k
Zfp9
Insm1
Sybu
Zscan22
Vax1
Tbc1d22a
Tmprss11e
Myo10
Lingo2
Epc1
Clasp1
Ska2
Prr11
Khsrp
Polr2e
Zfp428
Zmym4
A2m
Nfkbiz
Ttc41
Hsp90b1
Ptger2
Lix1
Lmo3
Epb41l5
Mafb
Gtf2ird1
Pkdcc
Tle4
Acaa1a
Myd88
Sap30bp
Recql5
Hsbp1
Pcnx3
Map3k11
Lmo1
Mettl8
Dcaf17
Tprgl
Senp7
Psat1
Krr1
Rhobtb2
Adnp
Nemf
Ccdc177
Kdm2b
Ermn
Hpgd
Camk2a
Mecp2
Clu
Rnh1
Bmpr1b
Xxylt1
Poc5
Ankrd40
Alg8
Kmt5c
Zfp180
Ctbp2
Fsbp
Sec61b
Alg2
Med6
Cwc22
Zfp574
Dipk1c
Virma
Slc1a5
Pigo
Drosha
6030458C11Rik
Zfp729a
Chek2
Mdm1
Naa50
Atp6v1a
Mzf1
Calr3
1700030K09Rik
Asf1b
N4bp2l2
Ppia
Psmd11
Trim35
Actr1a
Ccdc12
Sorbs2
Gm5165
Prmt1
Snrpc
Tet3
Cep120
Rpl13a
Pipox
Polg
Tle3
Arfip1
Btbd17
Mrpl23
Mtus1
Myt1
Clcn3
Lmln
Zfp386
Rtn4
Helt
Dhrs7b
H2bc4
H2ac6
Rpf1
Slc38a9
Cntn6
Ifrd2
Brms1l
Trim11
Sft2d1
Polr3b
Riok2
Klhl18
Kif9
Arih1
Vps28
Arvcf
Zswim1
Tysnd1
Adgrv1
H4c18
Btbd8
Rcn3
Sec13
Dcaf11
Tigd2
Slc35b1
Numa1
Neurl2
Ctsa
Prrx1
Pld1
Rgs13
Stk35
Gng2
1700113H08Rik
Sv2b
Ndst1
Tspan9
Mylpf
Tbc1d10b
Lrr1
Hexim1
Psd3
Rfx4
Ing2
Dusp6
Arhgef10l
Knl1
4833420G17Rik
Gm973
Rpusd1
Chtf18
Grcc10
Dennd2a
Six3
Tmx1
Cox7a2l
Ankrd29
Sat2
Clasp2
Tspan17
Fam118a
Camk1g
Plpp3
Eef1a1
Marcks
Polr3h
Zfp608
Mtf2
Oma1
Gba
Pip4p2
Tmem67
Rbm12b2
Thyn1
Acad8
Itfg2
Ostc
Nup205
Prmt3
Yipf1
Lrp8
Imp4
Ccdc115
Inip
Mrps28
Abcf2
Atp5mpl
Thoc3
Luc7l
Usp39
Hnrnph1
Hacd3
Urm1
Zfp622
Txnl4b
Dhx38
Kdm4a
Zkscan5
Zfp960
Srek1
Nupl1
Bcar3
Klhl9
Tmem47
Znrd1as
Znrd1
Prcc
Adamtsl1
6720489N17Rik
Igf2bp3
Twistnb
Prickle2
Ascc3
Tmem218
Cntln
Cdk12
Men1
Maz
Camsap1
Emc7
Slc39a9
Erh
Ccpg1os
Ccpg1
Lrrtm2
Sema4c
Spop
H4c17
Smpd4
Itgbl1
Med23
4930583I09Rik
Ell2
Zfp317
Bfsp1
Rab7
Tcf4
Lypd4
Dmrtc2
Phf5a
Aco2
Cdk1
Trib1
Slc18a1
Atp6v1b2
Anp32e
Cwc25
Psma1
Rcan1
Uchl1
Nifk
Ints12
Gstcd
Prepl
Camkmt
Peak1
Hmg20a
Nat14
Ccdc190
Wdr95
Rps8
Hunk
Ndufb4
Mob3a
Izumo4
Fabp7
Syncrip
Ttll9
Pprc1
Tecr
Ppan
Flcn
Igsf10
Ube2b
Itgb8
Tgif1
Ppp1r9a
Scg2
Abcd2
Tomm20
B4gat1
Utp3
Lmo2
Wdr33
Sec22a
Sfswap
Gas1
Seh1l
Gm51425
Aff4
Stap2
Mpnd
Celf2
Noct
Mettl3
Pcdhgc4
Rplp2
Gse1
Gucy1b2
Fgf7
Ccdc194
Spsb4
Os9
Polr2a
Phactr1
Fam181a
Gm6712
Mvd
Tmem219
Tm2d2
Adam9
Srsf11
Lrrc40
Mterf1a
Ubxn6
Hdgfl2
Dnajc16
Kif18a
Cdipt
Cdiptos
Plekhg1
Kcnmb2
Glmp
Acyp1
Rps7
Dhx8
Fam149a
Laptm4a
Sc5d
Trak1
Rps11
Map2k6
Mbnl2
Zc3hc1
Hnrnpul1
Dct
Coq8a
4930402H24Rik
Phc2
Rest
Zfand6
Cenpu
St7
Nat8
Riok3
Ints9
Hmbox1
Eif3f
Lpxn
Zfp91
Ubp1
Srp68
S1pr1
Zcchc7
Usp1
BC107364
Ankhd1
Eif3d
Lrfn5
Krtap3-3
Snrpd3
Gucd1
Pcdh8
Rpl22
Amt
Kat7
Enpp3
E2f2
Amn1
Dab2ip
Nup85
Rps29
Snapc2
Elmo2
Phc1
Dcn
Lpar4
Thada
Ric8b
Prkacb
Rufy3
Fmn2
Bcl9
Lrrtm3
Rpl32
Ptrhd1
Cenpo
Gapdh
Agbl5
Ednrb
Ybx1
Thap2
Phf12
Pnn
Arx
Acaa2
Prkcq
Nvl
Tspan31
Alyref2
Lin7c
Homer3
Cstf3
Trp53bp1
Chmp2a
Mad2l1
Scrn2
Evi5l
Psmf1
9430015G10Rik
Ctdp1
Trafd1
Ppip5k2
Gin1
Cibar2
Stc1
Ranbp3
Tafa5
Arhgef19
Slc9a5
Fhod1
Gas8
Usp31
Pmch
Ctnnb1
Cand1
Zeb2
Gm5148
Fgfbp3
Creb5
Rab3ip
Add1
Tlx3
Kyat1
Rrnad1
Isg20l2
Tuba1a
Zbtb38
Npepps
Rnf5
Ago2
Bcl11b
Siah3
Cbx5
Zfp605
Fxn
Tcp11
Akirin2
Tomt
Lamtor1
Sspn
Tmem220
Ascc1
Anapc16
Nucks1
Tnks2
Cipc
Hnrnph2
Gla
Atp6v1f
Dhx16
Tdrd7
Ccp110
Smim19
Slc20a2
Zmynd8
Spink10
Fbxo38
Mfap3l
Rad51ap1
Lpin2
D6Wsu163e
Uprt
Rhoj
Gjb1
Arhgap15
Cdk19
Etfb
Fndc3b
Pnkd
Cenpm
Ezh2
Grip1
Rgs8
U2af2
Trmt112
Prdx5
Msantd4
Miga1
Spata7
Tgfb3
Wls
Rhpn1
Psmd5
Mob1b
Tmem201
Nolc1
Spry2
Zbtb18
Zfp869
Sp2
Pan2
Ubxn4
Tcof1
Ptprg
Alpl
Cs
Ptma
Irgq
Gpx8
Tagln3
Ddx19a
Tbc1d9
Plin3
Vps33b
Ttc9c
Hnrnpul2
Uvrag
Xrn2
Mpv17l2
Snapc5
Rbm6
Slc4a2
Med16
Cnot1
Exosc4
Cabcoco1
Hjurp
A730008H23Rik
Sigmar1
Mtr
Ints6
Naaa
Lman2
Sumf1
Jdp2
Ndufa3
Poc1a
Oscar
F8a
Glipr1l1
Supv3l1
Fam110b
Vcam1
Smim7
Arhgef17
Cep170
Sdccag8
Nudt5
Cdc123
Erich1
Pemt
Gabpb2
Ccnl2
Nacc2
Sash1
Rps19
Ahctf1
Ccdc171
Bet1
Ltbp1
Hmga1b
Hmga1
Fyco1
Tmed10
Poldip3
Ambra1
Armc8
Itpr1
Bend3
Tube1
Fam229b
H2bc14
Hip1
Rpl9
Lias
Ankrd6
Oxr1
Ppp4r2
Pde1a
Hspa9
Zzef1
Cyb5d2
Ttc25
Tnpo2
Tcf3
Mepce
Zcwpw1
Strip1
Ttc32
Zfp354b
Uba1
Zfp46
Mtmr2
Vmac
Ndufa11
Frrs1
Wdr6
Gripap1
Pfkfb4
Prdm4
Kctd5
Zfp955b
Zfp369
Fuca1
Flrt3
Nop53
Tonsl
Zfyve28
Cfap99
Nucb1
Cyp2j9
Klhl5
Zfp454
Decr1
Acad12
Tma7
Ccdc51
Sp1
Ube2cbp
Atg4c
Sp5
Coq8b
Adgrb2
Gldc
Tril
Gadd45g
Arhgap11a
1700008O03Rik
Arhgap26
Aptx
Zfp738
Hdac9
Proser1
Nhlrc3
Arnt
Zfp13
Zfp444
Zfp871
Def8
Larp4
Pcdh18
Setd1b
Tbc1d32
Zbtb6
Sbk1
Sms
Tufm
Foxj1
Rdm1
Slc26a7
Cnot6l
Phyhipl
Cfdp1
Uqcrq
H4c1
H3c1
Tef
Ddrgk1
E030030I06Rik
Txndc12
Btf3l4
Tstd2
Ncbp1
Cc2d1b
BC049762
Clk4
Tcea1
Med24
Nsa2
Gfm2
Map2k7
Ccdc107
Tsacc
Cct3
Tars
Srpk2
Ddr1
Leprot
Lsm4
Zfp146
Helb
Abcc10
Selenot
Fem1b
Slx4ip
Mkks
Naa16
Ipo11
Mrps11
Mrpl46
Wwox
Plekhh3
Edn1
Esrrg
Fzd1
Tacr1
G2e3
Sac3d1
Dad1
Abhd4
Marchf6
Dpy30
Stoml2
Farsb
Tti2
Pcf11
Zfp773
Ctnnal1
Arl4d
Nwd1
Kcnip3
Donson
Hdac1
Pramel12
Tmem29
Zfp260
Ptgr2
Mlf2
Cops4
Stx5a
1700092M07Rik
Rps26
Dock9
Lgals12
Anks1b
Nup153
Rad54l
Mypop
Cntn4
Kbtbd8
Leng8
Hmx3
3300002I08Rik
Poglut3
Wdr76
Mfap1a
Irf3
Bcl2l12
T2
Sema4b
Abhd12
Heatr1
Arhgap32
Rpl23a
Arhgap42
Lpar2
Sox4
Dlx1
Hspa4
Zyg11b
Ttc21b
Mageh1
Trdmt1
Scn2a
Ppt1
Tcf12
Tpmt
Kdm1b
Abhd8
Mrpl34
Gss
Clec2d
Tmem131l
Rragd
Ccni
2010109A12Rik
Castor2
Vcp
Tmem109
Cdk5
Arid4a
Zcrb1
Pphln1
Gm38396
Mthfr
Mcf2l
Nsmce3
Pigc
4930558K02Rik
Retsat
Elmod3
Gpr89
Ttc33
Mvb12a
Dpp6
Fbxo36
Uros
Bccip
Tcerg1
Shd
Commd4
Ptges2
Scnm1
Lysmd1
Psmd1
Stil
Nlk
Cyyr1
Pkm
Tmed7
Eif1a
Polr3e
Zfp457
Nckap5
Dcaf10
Sarnp
Ormdl2
Entpd1
Lhx6
Rmnd5b
Ccar1
Nrde2
Usp48
Metap2
Gpm6a
Limch1
Prcp
Ddias
Taf5
Zfp870
Slc35a1
St18
Cr1l
Derl1
Gpx4
Cntnap3
Snx11
Etv5
Rcbtb1
Slc31a1
Fkbp15
Qrich1
Jmjd1c
Rbm34
Ccdc126
Tbc1d14
Nsun4
Dnal4
Abhd11
Mxd4
U2af1
Hexim2
Syn3
Ube2j1
C330018D20Rik
Chkb
Vit
Smarca2
Ints10
Sema3a
Ctu1
Gadd45gip1
Zfp207
Wdr55
Taf13
Pum3
Mcts1
Sox8
Gadd45a
Atad2
Nucb2
Fbxo15
Nrf1
Ppp1r10
Hax1
Trmt2a
Ranbp1
Mrpl11
Timm21
Idh1
Pikfyve
Rnf10
Aggf1
Shc3
Tjp2
Fbxl19
Katnal2
Tdrkh
Cldn22
Rangap1
Kbtbd3
Cfap20
Otub2
Chrm4
Rbm42
Zfp128
Ddx56
Cep112
Kdm4d
Cwc15
Marf1
Syne2
Edaradd
Rapgef2
Mthfs
Qtrt2
Ccdc191
Selenos
Zcchc8
Upf3b
Rnf122
Selenoh
Wdr12
Carf
Cop1
Kctd13
Med13
Megf8
Aatf
Prdm9
Rap1gds1
Lsg1
Slc25a18
Arhgap28
Ing1
Pde4b
Spag9
Abhd1
Ccdc9b
Cenpc1
Fam193b
Ing4
Mfap1b
Nsf
Lclat1
Clpx
Sec23ip
Denr
Wdr77
Atp5pb
Rbm39
Styxl1
Mdh2
Scamp5
Kmt2a
Mapk14
Ireb2
Akap11
Eif4a3
Mcts2
Ube2d3
Banp
Ercc6l2
Dnajb4
Arf3
Rraga
Fubp1
Naa35
Supt5