ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX499130 | EpiLC
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◣ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

2610528J11Rik
Mrpl28
Surf6
Gdf5
Dhx32
Zfp658
Phc2
Tstd1
Lima1
Tmem154
Inppl1
Slc45a3
Calr3
1700030K09Rik
Itgb8
Zfp623
Zcrb1
Pphln1
Il18
Bco2
Eif1ad
Banf1
Sap30bp
Recql5
Clec12a
Rspry1
Psme3ip1
Frzb
Ifrd2
Mib2
Slc39a14
Thap4
Abcf2
Armcx1
Stk11ip
Zscan22
G2e3
Gpr1
Gtf2ird1
Mtf2
Stk38
Arhgap32
Polr3k
Prrt3
Alg8
Pcyt1b
Abca4
Bod1l
Alpl
N4bp2l2
Ing2
Numa1
Npepps
Plin3
Zfp960
Khsrp
Eif5a2
Myo10
Msi1
Irf2bpl
Kif18a
Lrpap1
Anp32e
Ifitm1
Gba
Rbm14
Gm21992
Ercc6l2
Sall2
Zfp428
Srek1
Irgm1
Scaf4
Chek2
Rbbp8nl
Drosha
6030458C11Rik
Cdk12
Thada
Snurf
Snrpn
Hvcn1
Ireb2
Sfi1
Phc1
Homer3
Tigd2
Kcnmb2
BC107364
Rab15
Trp53bp1
Ccdc110
Ccdc194
Porcn
Lrrtm3
Plekhg1
Zfp9
Prss48
Il1rapl1
Rabl3
Gtf2e1
Nfkbiz
Phyhd1
Fgd4
Nanog
Zfp317
Adgrv1
Tprgl
Styxl1
Mdh2
Arfip1
Slc40a1
Dhx8
Tmem218
Prdm10
Pafah1b3
Prickle2
Rps23rg1
Emc8
Gm27021
Cox4i1
Phf23
Cbl
Pde4b
Reep3
Mterf1b
Zfp180
Mrps14
Zfp791
Abhd12
Arnt
Efs
Epb41l5
Lrrn2
Zfp946
Rif1
Rbm39
Virma
Gjc1
Cpsf6
Prickle1
Gm5165
Dpp6
Pcsk9
Ptgr2
Mafb
Tjp2
Polr2e
Wnt5b
Slc7a3
Atp5mpl
H4f16
Poc5
Cdh10
Acaa1a
Myd88
Lypd2
Riok2
Ell2
Spr
Tmem270
Cstf3
Mterf1a
Stil
Cwc25
Ramp2
Wdr77
Atp5pb
Chmp2a
Kdm2b
Mrps28
Mettl8
Dcaf17
Zfp386
Ankrd39
Trim2
Tepp
Prmt1
Parp10
Pou5f1
Med16
Epcam
Xxylt1
Gchfr
Supt5
Pipox
Chchd3
Dhrs7b
Snx18
P2rx7
Ttc41
Hsp90b1
Coq8a
Cox7a2l
Oas1g
Dmkn
Rdx
Tma7
Ccdc51
Slc38a9
Mcf2
Btbd17
Sspo
Nupl1
Nifk
Sft2d1
Snrpc
Zmym4
Rab38
Rrp36
Dazap1
Zfp13
Fbxo15
Nop14
Grk4
Cdh9
Dennd2a
Lmln
Ssbp1
Pdzk1
Bspry
Prex1
Dguok
Kmt5c
L3mbtl2
Bcar3
Ankrd6
Gm3604
Trim33
Qrich1
Tomm20
Ndufs8
Serinc5
Dusp6
B4galt1
Cerkl
Mindy4
Poglut3
Slc35b1
Ly6e
Ctcf
Rnf10
Ndufa12
Pigo
Ldc1
Pym1
Tspan9
Mlf2
Megf8
Cep170b
Tmem220
Ccp110
Tnrc6b
Pou2f1
Amn1
Gbp9
Tomm7
Kazald1
Flt4
Rps3a1
Hlf
Phf12
Zfyve19
Dnajc17
Tyr
Zfp574
Tmeff1
Pemt
Pex5l
Zkscan5
Med12
Galnt16
Adnp
Fsbp
Rc3h2
Imp4
Ccdc115
Gbp6
Faap20
Arhgap42
Abca14
Atcay
Scamp5
Gid8
Dido1
Chd9
Slc46a3
Zfp605
Med6
Micos10
Rbbp8
Rad54l
A2m
Lrrc38
Zyg11b
Mob1b
Tubd1
Rps6kb1
Pop7
Ptrhd1
Cenpo
Pes1
Tril
Mmut
Cenpq
Emc7
Septin4
Afap1l2
Tmem47
Krr1
Wdr27
1600012H06Rik
Slc25a1
H2bc4
H2ac6
Ndufaf3
Insr
Trp73
Pifo
Gm14393
Dusp13
Rnh1
Vps18
Zfp532
Trim35
Dennd2c
Creld2
Alg12
Med23
Psmd5
Jmjd1c
Smim43
Ankrd40
Sulf1
Mad2l1bp
Csrnp3
Etfrf1
Casc1
Itfg2
Hip1
2410137M14Rik
Rpusd1
Chtf18
Rdh12
Rraga
Gm51425
Psph
Cct6a
Vps28
Tlk2
Mettl16
Mapk14
Pnpla6
Vrtn
Spp1
Qtrt2
Ccdc191
Mars1
Ints12
Gstcd
Zfp566
Asf1b
Ankib1
Prcc
Psma1
Scamp3
Bdh2
Npc1
Naa16
Cyp7b1
Mcts2
Farsb
Psmb8
Ripply1
Trim11
Os9
Fxn
Pafah2
Denr
Fbxo27
Col13a1
Catip
Cep85
Naa50
Atp6v1a
Plcd4
Stk35
Rbpj
Abcg1
Nt5c3
Ric3
Cysltr1
Snap23
Pcnx3
Map3k11
Vkorc1
Galk2
Cops2
Naa35
4930447C04Rik
Anxa11
Slc27a2
Utp3
Actn2
Pcdhgc4
Polr3b
Tcf7
Naa80
Hyal3
Nufip2
Tmem143
Syngr4
Thyn1
Acad8
Foxp1
Ube2d3
Dedd
Prdm4
Synm
Hells
Cdh1
Mad1l1
Actr1a
Map1b
Clec2d
Ufl1
Igsf9
Ralgps2
Scn1a
Dcp1a
Srrt
Shc4
Ubr7
Mettl3
Gm3696
Pcdhga12
Mymx
Cnot10
Zfp128
Stk39
Arhgap28
Kbtbd8
Psmd11
Dhx16
Psmb2
Zfp871
Ppp1r15b
Zscan10
Stag3
Gpc2
Pbx1
Zfp750
Ahctf1
Pnn
Rbm25
Zfp819
Rbm6
Rab43
Tnfrsf8
Efemp1
Arl15
Naaa
Nkx3-1
Vps33b
Yif1a
Flnb
Cs
Tmem201
Timm22
Lpar2
Caprin2
Rpia
Krtdap
Plekhb1
Bmpr1b
Msantd2
Cox16
Rbm42
Cd164
Lefty1
Ppp1r9a
Stoml2
Zbtb6
Mrps23
Gm8439
Scnn1g
Slc39a2
Haspin
Add1
Ostc
Tmem11
Ntn5
Tspan17
Tef
Zfp97
Rab3ip
Hjurp
A730008H23Rik
Slc25a44
Fam178b
Gm38396
Tuba1a
Defb1
Clcn2
Cd38
Abhd18
Znrd1as
Znrd1
Zyg11a
Ska2
Prr11
Scrn2
Atg16l1
Rpl7a
Med22
Lman2
Fam118a
6720489N17Rik
Abcg2
Tubgcp5
Rgs12
Zfp493
Polr1b
Cdipt
Cdiptos
Sil1
Upp1
Igbp1
Nudt1
Ahcyl1
Plekhf2
Glipr1l3
Hnrnph1
Ptprs
Mecp2
Fbxo11
Pex3
Adat2
Cep72
Cdk1
Naa38
Cyb5d1
Cntnap2
Sf3b2
Cnpy1
Eif3c
Sema3a
Ryr2
Snx15
Stxbp4
Cox11
Trappc3
Soat1
Tmem255b
Triqk
Cdc5l
Gm3558
Josd2
0610040J01Rik
Slc9a3
Ephb3
Zfp638
Srsf11
Lrrc40
Clu
Fah
C77080
AB010352
Mad2l1
Nek2
Etfb
Knl1
Fdps
Prdm14
Fam169a
Lrp2bp
Dusp5
Plxnb1
Tpm1
Mzf1
Rpl9
Lias
Adprhl2
Sp1
Cdc14b
Ankfy1
Smarca5
D1Pas1
Mid1
Tecr
Ubr5
Zfp955b
Slc35e4
Cdhr1
Eif4a1
Prcp
Ddias
Magi1
Phf5a
Aco2
Prpf8
Cdk20
Evl
Ctbp2
Msl3l2
Nip7
Cog8
Ddit4
Ooep
Fundc1
Rbm4b
Rapgef1
Sec23ip
Hnrnph2
Gla
Dmtn
Rin2
Pfkfb4
Ddah2
Nvl
Slc33a1
Icam4
Fbxo36
Trip12
Cyp2j9
Ndufb6
Slc30a6
Pigc
4930558K02Rik
Itga5
Pigm
Aadat
Sarnp
Ormdl2
Lrrn4
Arhgef17
Smim19
Slc20a2
Lrtm1
Kmt2c
Men1
Kctd5
Rab18
Kctd7
Csrp1
Slc39a4
Trpm3
Chaf1a
Mustn1
Slc22a3
Shroom3
Rmnd5b
Pip4p2
Ckmt1
H4c1
H3c1
Faf1
Clcn4
Uspl1
Zfp609
Ccar2
Slc35e3
Sh2d5
Dynll1
Smg5
Sat2
Car14
Snrpe
Trmt112
Prdx5
Rln1
Rps19
Zfp972
Ube2t
Ddx56
Zfand4
Alad
Ints4
Rnf5
Klhl18
Kif9
Ess2
Fntb
Ccz1
Cdan1
Mtr
Timm10
Zfp689
Dpy30
Bet1
Nufip1
Gpalpp1
Sh3glb1
Fetub
H4c18
Wrap53
Trp53
Gm36298
Sdhaf4
Slfn9
Rpl22
Glmp
Bcl9
Plcxd1
Btla
Uqcrq
Nbeal1
Dctn1
Lhpp
Tube1
Fam229b
Wnt7b
Ddrgk1
Stx3
Adra2b
Grcc10
Trip4
Csnk1g1
Nsa2
Gfm2
Rnf125
Hsbp1
Pcca
2010003K11Rik
Zfp369
Sco2
Acyp1
Fitm2
Thbs2
Rps2
Chrm4
Mfsd14b
Ube3c
Ints6
Madd
Ifitm2
Ubtf
Nyx
Fbxl12
Ccar1
Gps2
Rpl23a
Ints10
Pprc1
Katna1
Gm6712
Wdpcp
Mdh1
Ngdn
Gm7932
Tor4a
Rubcnl
Zfp935
Fam172a
B9d1
Ptk7
Glipr1l1
Tysnd1
Ppp1r10
Thra
Tmem95
Btbd10
4833420G17Rik
Tlr2
Gpx1
Egfl7
Tspan31
Zfp738
Gm3752
Tmprss13
Puf60
Smim7
4833439L19Rik
Eef1a1
Camsap1
Atg16l2
Snrnp200
1810024B03Rik
Mcfd2
Cobll1
Kcns1
Rgs20
Gpr89
Ank3
Tmem101
Gm5544
Eif4a3
Gpr21
Tmcc3
Lrig2
Aven
Tmem245
Donson
Kif2c
Gpx8
Fgfbp1
Zfp286
Zzef1
Cyb5d2
2410141K09Rik
Vps50
Arhgap26
Tial1
1700019D03Rik
Rsph4a
Chuk
Acin1
Rrnad1
Isg20l2
1700123O20Rik
Smg8
Timm13
Hdac9
Fam83e
Nsmce3
Igfbp2
Ppp1r16b
Gprc5c
Rangap1
Ndufa3
Cplx3
Oscar
Rhbdf1
Slc1a5
Acp6
Spns1
Tmem135
Fzd4
Dcaf11
Isl1
Trmt10b
Ubp1
2310030G06Rik
Zfp882
Rnpc3
Msrb1
Qser1
Pura
Gm3173
Cfap298
Gpank1
Csnk2b
Dnajb4
Fubp1
Trappc2
Ofd1
Enkd1
4933405L10Rik
Tmed10
Ago2
Ptprz1
Get4
Efcab12
Ccdc126
Ints9
Hmbox1
Prkacb
H2ax
Ap1g2
Zfp54
Sptbn1
Rbm17
Rac3
Leprot
Fnbp4
Gng2
Tuft1
Rab3c
Ttc14
Ncoa4
Tbc1d32
Gripap1
Rps6
Amt
Ascc1
Anapc16
Mapk4
Mrpl39
Adgrb2
Nsd1
Med11
Btrc
Ccdc60
Myadml2
Mcts1
Set
Tfpt
Prpf31
Zp3
Ppp2ca
Mepce
Zcwpw1
Tmem43
Chchd4
Zfp446
Ppip5k2
Gin1
Hexim2
Pdlim5
Ppp1r3c
Spred1
Pax6
Tgm3
Ndrg3
Rhbg
Zcchc7
Csde1
Otub2
Nfe2l2
Trim12c
Cd2bp2
Fam161a
Ccndbp1
Coa3
Cntd1
Gpn3
Fam216a
Ccpg1os
Ccpg1
Sec61b
Alg2
Nhsl1
Rps27a
Clhc1
Ergic2
Polr2h
Snrpd3
Gucd1
Cox6b2
Rps8
Mllt1
Gramd3
Epc1
Zfp146
Taar9
Ttc27
Il33
Iqgap1
Edrf1
Mfsd8
Trappc9
Tbrg1
Upf3b
Zfp346
Tex261
Mis18a
Lamtor3
Tmsb15b2
Nsun3
Erich1
Tbc1d15
Mb21d2
Cdk19
Cenpu
Dcaf12
Ttc33
Mrap2
Eif5a
Uvssa
Mvb12a
Hacd3
Npc2
Isca2
Meioc
Gm10130
Arf3
Lamp1
Cipc
Rbm45
Spred2
Rpgrip1l
Fto
Pou2f2
Med24
Rnf141
Ddx24
Fam120a
Eml6
Lsm14b
Wdfy2
Ficd
Golph3l
Gemin4
Dbil5
Sdhaf3
Tomt
Lamtor1
Asph
Mtmr9
Txnl4b
Dhx38
Sigmar1
Cdc20
Ppp1r11
Ccdc88c
Sirt2
Nfkbib
Arl6ip1
Cxcl12
BC004004