ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX499117 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◣ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Ccdc110
Cdk12
Ercc6l2
Wdr77
Atp5pb
Styxl1
Mdh2
Dhx8
Faap20
Mrpl28
Lrrn2
Psmd5
Mtf2
Rbm39
Supt5
Tmem270
Denr
Ankrd39
Pcdhga12
Zfp317
Qrich1
Nop14
Grk4
Porcn
Rraga
Trappc3
Stk38
Snrpe
Mib2
Phc2
Dhx32
Micos10
Lima1
A2m
Ccdc88c
Ahcyl1
Tnfrsf21
Rc3h2
Prdm14
Lif
Lrpap1
Mapk14
Slc26a8
Gjc1
Scamp5
Mterf1b
Tmem14a
Cst3
Zfp42
Gprc5b
Eif1ad
Banf1
Vps18
Gdf5
Timm22
Mterf1a
Polr3k
Vav2
Ireb2
Mettl16
Slc7a3
Rac3
Abcf2
Cstdc2
Slc25a1
Fbxo27
Abca14
Armcx1
Ephb3
Usp48
Pik3r4
Fntb
Surf6
Pdzd9
Zfp638
Basp1
Trp53bp1
Pou2f2
Arf3
Mrps14
Scnn1g
Hlf
Sec23ip
Ccdc126
Snai1
Zfp623
Npr1
Kif18a
Col1a1
Rae1
2410137M14Rik
Stxbp4
Cox11
Scaf4
B9d1
Ell2
Spp1
Eif5a2
Zfp658
Pafah1b3
Rnf10
Bod1l
Ankfy1
Naa38
Cyb5d1
Stk35
Sfi1
Stk11ip
Slc36a1
Ube2d3
Btbd10
Rab27a
Snx18
Huwe1
Drosha
6030458C11Rik
Pafah2
Bcl2l1
Gm5544
Polr2e
Dpy30
Trpm3
Stag3
Gpc2
Aadat
Elf3
Smarca5
Arl15
Rps19
Ephb1
Lix1
Slc12a9
Dnajb4
Fubp1
Rab37
Tmcc2
Cirbp
Ccdc194
Kcnh1
Pdzd2
Apmap
Rspry1
Psme3ip1
Wrap53
Trp53
Selenom
Crk
Tmem95
Rpl7a
Med22
Nudt1
Rif1
Adprhl1
Myo10
Mlf2
Dusp13
Pkd2
Vegfa
Tinf2
Piezo1
Eif4a3
Mymx
Rbm4b
Adnp
Csrp1
Cdc5l
Mrps28
Cpeb3
Nsun3
Cilk1
Ifrd2
Zbtb40
Gm14393
Josd2
Zyg11a
Catip
Prrt3
Gse1
Cdk5rap3
Ccin
Ppdpf
Phc1
Acaa1a
Myd88
Hspa4
Adra2b
Rnd3
Nat8f4
Atp5j2
Amt
Gstm1
Ddx20
Slc39a14
Psmb2
Trappc2
Ofd1
Gadd45b
Calr3
1700030K09Rik
Edrf1
Usp44
N4bp2l2
Med23
Arih2
Mgat5b
Cnpy1
Phf12
Rps3a1
Cep112
Mtnr1a
Tsc22d1
Trim36
Ncoa4
H2bc22
H2ac22
Grik4
Tcf7l1
Vegfc
Mcts2
Khsrp
Wdr27
1600012H06Rik
Phf23
Ifitm1
Rfx1
Med1
Bdh2
Dusp23
Nanog
Nme8
Adgrb2
Racgap1
Rbm14
Gm21992
Zfp819
Rapgef1
Creld2
Alg12
Zcrb1
Pphln1
Fam161a
Gm5155
Cnnm2
Ist1
Irak2
Tomm20
Efnb1
Cep85
Slc15a1
Upf3a
Rab38
Zfp148
Wnk1
Tsen54
Caskin2
Gm10634
Gm11100
Gm3411
Anp32e
Mllt1
Tns1
Rufy4
Vta1
Slc2a1
Ogt
Arnt
Tubgcp5
Sik2
Ntn5
Tmem143
Syngr4
Pibf1
Dis3
Rnpc3
Gm3696
0610040J01Rik
Micalcl
Srsf10
Megf8
Fam118a
Asph
Ergic2
Rabl3
Gtf2e1
Prickle1
Ddx58
Epb41l4a
Fubp3
Hmces
Gadd45g
Mrpl39
Flvcr2
Puf60
Pelp1
Bcat1
Dnah8
Lpar1
Slc25a45
Zscan22
Riok2
Poc5
Endov
Gba
Slc2a4
Slc12a6
Cdc42ep4
Spns1
Ptgr2
Tfap2c
Prmt8
Ahctf1
Adap1
Pcdhgc4
Sugp1
Mau2
Uqcrc1
Cwc25
Taf1c
Pnpla6
Serinc5
Cd164
Spdl1
Mfsd8
Hsbp1
Tmem242
Flrt3
Rbpj
Med11
Mc3r
Zcwpw2
Azi2
Stat6
Sap30bp
Recql5
Zfp960
D1Pas1
Pccb
Smim10l1
Atg16l1
Nyx
Scgb1c1
Ttc41
Hsp90b1
Rnf125
Rhpn2
H4f16
Banp
Npm1
Mpc1
Tbc1d9b
Mafb
Smg5
Fitm2
Pkia
Pipox
Arhgef17
Zfp286
Ninj2
Akap11
Ndufaf3
Hesx1
Meltf
Zfp566
Gm5165
Micu2
Fmr1nb
Rrp9
Parp3
Cdh23
Abhd18
Mob1b
Fem1b
Sh3rf3
Yod1
Cep70
Islr2
Sms
Lsr
Fam187b
Ripply1
Dpep2
Gpr1
2410141K09Rik
Lactbl1
Ntrk2
Mllt6
Vmn2r12
Serpina3i
Tonsl
Gcc1
Snx10
Deptor
Slc6a19
Col23a1
Haspin
Cenpt
Rpl7l1
Slc35b1
Dbr1
Rgs9
Samd9l
Adgrv1
Clu
Sema5b
Herc1
Entpd6
Tmem211
Adam19
Traf5
Clec12a
Ndufv1
Prcc
Mtss1
Prmt1
Cdc20b
Ddhd2
Plin3
Tpm1
Golm2
Zfp386
Spr
Trpm5
Inppl1
Ndufaf6
Radil
Top1mt
Ino80
Npepps
Nupl1
Slc38a9
Ube2q1
Dgkh
Tfap2a
Tmem47
Cox7a2l
Ttll1
Cped1
Cnot10
Sh3glb1
Mcf2
Epc1
Pcmtd1
Cdk20
Agbl3
Wnt7a
Rerg
Dnajc6
Polr3b
Polr1b
Fancg
Tmem218
Zfp428
Sun1
Med16
Lsm11
4833439L19Rik
Gm38396
Gm3558
Upp1
Tlr2
Nkain4
Zfp180
Rnf4
Pou5f1
Cct8
Zmat5
Uqcr10
Scn3a
Thada
Snx15
Insyn2b
Calhm5
Snapc5
Otos
Polr2b
Noa1
Nsun6
Arl5b
Nog
Gins4
Phf5a
Aco2
Nceh1
Srrt
Rpl12
Lrsam1
Ncapg
Adra2a
Rpl26
Ube2j2
Lrrc71
Snrpc
Psma1
Zfp97
Lrrtm3
Gpatch3
Rbm17
Zfp574
Lrif1
2010003K11Rik
Scn1a
Rnf150
Gm20594
Ttc14
Mmut
Cenpq
Dctn2
Kazald1
Gabrp
Adamts17
BC004004
Dock5
Galp
Ess2
Klhdc9
Tmem220
Rnf43
Npff
Arhgap28
Mrm2
Slc25a11
Rnf167
Naa50
Atp6v1a
Spata20
Gm33933
Ciao3
Atp8b5
Apbb2
Tedc1
Cemip
Pex10
Pdxdc1
Mpv17l
Defb1
Dhcr7
Parp11
Idnk
Gstm6
Steap1
BC107364
Wnt5b
Otx2
Gtsf1l
Fgf18
Chek2
Mycl
Nfkbiz
Add1
Pafah1b2
Terf1
Abr
Sik3
Mob1a
Ccnd3
Pds5b
Alg8
Kdm3a
Dmtn
Dnajc12
Alkbh7
Ltbp1
Hoxa5
Ptpru
1700008O03Rik
Tle3
Itgb6
Rrs1
Tmem18
Ago2
Etv1
Ddx47
Slfn10-ps
Filip1
Atp2c1
Srek1
Plekhg2
Nudt17
Homer3
Tmem209
Ssmem1
D830030K20Rik
Cryba4
Fam220a
Plekhb1
Stmn1
Rtca
Bmp4
Tbrg1
Chaf1a
Wdr18
Psmd8
Vps35l
Tcf3
Zfp345
Rbm26
Mbtps1
Dhrs7b
Trim71
Ltbp2
Gjb3
Brwd1
Tmprss9
Rpl10a
Lman2
Zfp871
Slc6a8
Slc35b4
Sypl2
Fam76a
Tmem191c
Alad
Zfp408
Ocm
Sdha
Ccdc127
Pde7b
Mycn
Arfip1
Tmem154
Synm
Lgi4
Apob
H2bc4
H2ac6
Cast
Zzz3
Gm51425
Qtrt2
Ccdc191
Ror2
Stk38l
Tspyl1
Amz2
Drg1
Prepl
Camkmt
Nol11
Rprm
Ccdc83
Ankrd13c
Gmppa
Psmd3
Bms1
Gpx1
Polr3e
Tmem101
Asb8
Plekho2
Trappc3l
Praf2
Naa35
Ryr2
Dguok
Gabpb2
Sulf1
Nr6a1
Apol7a
Rpl23a
Nid2
Dppa5a
4833420G17Rik
Tomm40l
Apoa2
Pop7
Dars
Sp2
Kif2c
Rcbtb1
Polr3f
Dzank1
Glipr1l3
Tgfb1i1
Fbxo15
Klhl18
Kif9
Gramd3
Gm1070
Cluap1
1700037C18Rik
Cgnl1
Sp1
Ube2d2a
Gm6712
Lpar6
Timp4
Sema6c
Pde1b
Tgfb3
Fcor
Plk2
Gcat
Dcbld1
Adgrg5
Rpusd1
Chtf18
Cbx5
L3mbtl2
Timm21
Crybg1
Phlpp1
Ly6k
Itga9
Psph
Cct6a
Cdipt
Cdiptos
Zfp493
Vstm2l
Abca1
Mad1l1
Hcrtr1
Cox6b1
Thap1
Asb16
Pcdhgb8
Pglyrp1
Hvcn1
Ccdc63
Zfp689
Kctd7
Gid8
Dido1
Nectin2
C2cd4b
Msi1
Zfp622
Pigo
Pemt
Pfkfb4
Taf1b
Ccdc62
Zfp947
Il33
Hsd17b6
Pbld2
Hnrnph3
Relch
Pign
Donson
Rbm25
Atg101
Lyzl6
Sbno1
Trim34a
Bcl3
Pde2a
Def6
Vmac
Ndufa11
Nanp
Gnpnat1
Tent5b
Thbs2
Snrpg
Mertk
Pts
Vkorc1
L1td1
Daam1
Coq8a
Cryzl2
Wif1
Abcb8
Prss48
Dcp1a
Abcg2
Strip1
Cntnap2
Cfap70
Egr2
Nktr
Fbxo11
Abl1
Fam189a1
Cd276
Saa3
Ywhag
Chd9
Agfg1
Cpsf6
Frzb
Prickle2
Rpp38
Cerkl
1700125H20Rik
Etfrf1
Casc1
Poglut3
Ppil2
Ldb1
Nlrc4
Ccdc142
Gucy1a2
A630001G21Rik
Pym1
Upf3b
Stap2
Mpnd
Tex9
Wsb2
Gm45871
Gsta4
Coq10a
Eif3f
Fmnl3
Barx2
Il18
Bco2
Rps23rg1
Kmt5c
Clcn4
C130074G19Rik
Pgap3
Pax2
Kifc3
Zfp13
Kcnmb2
Vps4b
Cdx1
Mcmdc2
Tha1
Cep170
Sdccag8
Srp19
Cpsf4l
Plekhf2
Churc1
C1rl
Mettl3
Slc5a6
Atraid
Ints9
Hmbox1
Ndufa12
Cenpu
Zfp54
Smc1b
Afap1l2
Acp2
Comtd1
Itgb3bp
Efcab7
Krcc1
Ovca2
Tph2
Liph
Atp5mpl
Atf7
Bambi
Timm13
Wdr38
Cfap100
Tfe3
Gchfr
Lrfn2
Hip1
Pum3
Hck
Tnfaip1
Ift20
Idh1
Virma
Ptpn4
Slc15a4
Oas1g
Icam4
Dennd2c
Tex19.1
Tnfrsf19
Dync1i2
Zkscan2
Tafa5
Rpp40
Med12
Sbk2
Disp3
Kdm4d
Cwc15
Dnajc21
Spock1
Zfp369
Dpp6
Taf5
Pik3r2
Mobp
Parl
Rsad1
Atp6v0d1
Necab2
Xrcc5
Gpx8
Fbxw10
Cidea
Kcnj6
Ppm1f
Zfp595
Ptrhd1
Cenpo
Copb2
Zfp738
Thap7
Gm3752
Slc12a2
Cd2bp2
Dlgap4
Msh6
Spc25
Upk2
Kif26a
Trim66
Ints12
Gstcd
Mad2l1
H4c18
Smim19
Slc20a2
Mad2l2
Pdk1
Mmachc
Ccdc163
Rlim
Nfe2l1
Sh2d5
Cep135
A830018L16Rik
Shpk
Ctns
Olfr15
Get4
Ska2
Prr11
Vps28
Utp3
Stat3
Slc33a1
Atp5g1
Mtus1
Slc39a13
Depdc1b
Btbd16
Prex1
Mad2l1bp
Scamp3
Spata33
Chmp1a
Ddx24
Serpinb9
Cblc
Oas1a
Rbm46
Stil
Pacsin2
Thoc6
Hcfc1r1
Slc43a1
Wipf1
Cyhr1
Smc3
Kifc2
Cox7b
Tigd2
Map3k7
Prdx1
Ssbp1
Knl1
Ufl1
Zfp955a
Nvl
Ints4
Stk40
Tsnaxip1
Ranbp10
Frg1
Zc3h15
Gm3264
Cep164
Megf10
Erap1
Tomm7
Chmp2a
Rpl22
Spg11
3300002I08Rik
Zwilch
Rpl4
Cstf3
Csde1
Naa16
Hif1an
Rad51
Pla2g15
Troap
Stx8
Cfap52
Cd59b
Stx3
Dip2b
Hoxb5
Atf2