ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9450558 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◣ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Denr
Qrich1
Cdk12
Wdr77
Atp5pb
Styxl1
Mdh2
Kmt2a
Scamp5
Rbm39
Mapk14
Ireb2
Akap11
Eif4a3
Mcts2
Banp
Arf3
Hspa4
Psmd5
Dnajb4
Fubp1
Ube2d3
Rraga
Ercc6l2
Naa35
Zzz3
Micos10
Ankfy1
Herc1
Supt5
Stxbp4
Cox11
Rps19
Smarca5
Nsun3
Golm2
Edrf1
Zbtb2
Btbd10
Tipin
Puf60
Zcchc14
Lsm14a
Slc25a11
Rnf167
Ddhd2
Tigd2
Rpl7a
Med22
Marchf7
Eif5a2
Myef2
Spdl1
Zkscan2
Dhrs3
Ssbp4
Uhrf2
Nudt1
Mrpl28
Dgke
Spsb3
Nubp2
Nptn
Rabl3
Gtf2e1
Huwe1
Ttc14
Naa38
Cyb5d1
D1Pas1
Mfsd8
Lpxn
Zfp91
Mob1a
Coq9
Ciapin1
Srek1
Rab6a
Creld2
Alg12
Tspan17
Fam135a
Yod1
Wdr27
1600012H06Rik
Tardbp
Fam76a
Map3k7
Atf7
Eif1ad
Banf1
Nktr
Tmco1
Get4
Ell2
Calr3
1700030K09Rik
Mettl8
Dcaf17
Rnf4
Tubgcp5
Kazald1
Aip
Tmem134
Abcf2
Drg1
Cstf3
Kif2a
Polr2e
Zfp623
Rnpc3
Srsf10
Smim10l1
Adnp
Abhd18
Drosha
6030458C11Rik
Efs
Stk11ip
Vdac3
Tmem47
Thap7
Mbd6
Pou2f1
Wdr6
Trappc2
Ofd1
Dzip3
Cip2a
Tmem209
Ssmem1
Relch
Pign
Nfkbiz
Idh1
Pikfyve
Zmym3
Tcf25
Rps3a1
Eif5
Kctd19
Lrrc36
Rspry1
Psme3ip1
Asph
Ube2e3
Atf2
Tpr
Odr4
Cdc5l
Tcf3
Prmt1
Dbr1
Polr3k
Zfp960
Sf3a2
Plekhj1
Npm1
Dhx32
Sfi1
Stag3
Gpc2
Surf6
Rps7
Micu2
Nhp2
Dars
Trim24
Mymx
Homer3
Rab33b
Gtf2ird1
Cnot3
Tlk2
Khsrp
Lamp1
Smim27
Prdx1
Arfip1
Rbm26
Epb41l5
Slc1a5
Septin7
Atp5mpl
Adgrv1
Upf3a
Caprin2
Tprgl
Stk38l
Sec23ip
Asxl1
Shroom3
Cpsf6
Zfp574
Dynll1
Fzd6
Smg5
Npepps
Arl2bp
Ptpn4
Nsd3
Gm5165
Phc2
Polr2b
Noa1
Clba1
Sspn
Ncoa4
Stk38
Tomm20
Hells
Haspin
Luc7l2
Snx5
Mgme1
Sap30bp
Recql5
Zdhhc5
Rps28
Dlc1
4833439L19Rik
Psmb2
Tspyl1
Srsf11
Lrrc40
Mettl16
Nop14
Grk4
Glcci1
Exosc10
Supt16
Slc25a4
Donson
Kin
Atp5c1
Tysnd1
Seh1l
Chek2
Xxylt1
Cul5
Ttc41
Hsp90b1
Usp53
Rfesd
Tmem191c
Mbtps1
Npc1
Ska2
Prr11
Pcmtd1
Zmym4
Zbtb40
Rc3h2
Csnk1g3
Lsm8
Pum3
Rims3
Zfand3
Prss48
Lmln
Zyg11b
Zfp386
Rpl26
Dazap1
Yif1b
Smim7
Map1b
Cul3
Matr3
Siva1
Cep170b
Slc5a6
Atraid
Med16
Dennd2a
Ksr2
Trp53bp2
Exo5
Tnip2
Ptgr2
Cs
Acaa1a
Myd88
Utp3
Cwc25
Actn2
Gm51425
Tpmt
Kdm1b
Cenpb
Virma
Cep85
Smdt1
Yipf3
Polr1c
Erich1
Mrps14
4930447C04Rik
Gtf2a1
Ndufaf3
Nupl1
Tmem129
Tacc3
Mre11a
Ankrd49
Pibf1
Dis3
Hip1
Flcn
Pih1d1
Aldh16a1
Larp4b
Slc38a9
Fam214b
Tmem18
Uqcrq
Mob1b
Glce
Pradc1
Cct7
Dnajc27
Jade1
Mcfd2
Osbpl2
Grb2
Mllt6
Smarcd2
Zfp78
Krr1
Ppp1r9a
Ggnbp2
Mysm1
Etfa
Ifrd2
Gdi2
Slc15a4
Sipa1l1
Smc1b
Chuk
Lta4h
Zscan22
Dusp6
Mrtfb
Uspl1
Phf23
Ctnnb1
Chaf1a
Mrps28
Dut
Rpl12
Lrsam1
Riok2
Cox7a2l
Anp32e
Ankrd40
Snrpd3
Gucd1
Tomm7
Trim11
Zfp219
Rictor
Sec63
Bclaf1
Lman2
Nrbf2
Hck
Tmem183a
Ranbp3
Actr1a
Ptrhd1
Cenpo
Ssbp1
Mrpl40
Hira
Gpr19
Kdm2b
Rab5c
Rmnd5b
H4f16
Stn1
Rfx1
Mapk8
Rab43
Zfp622
Rpusd1
Chtf18
Ints6
Tmx3
Ppard
Chmp2a
Trim59
Pop7
Dctn2
Zfp566
Spp1
BC004004
Ankhd1
Sugp1
Mau2
Lonp2
Pbld2
Hnrnph3
Frzb
Stil
Cox6b2
Mtf2
Hmgb2
Ccz1
Nsmce3
Brf1
Gm3448
Gm3417
Tcte3
Ermard
Slc39a9
Erh
Sap18b
Sap18
Ubr3
Ints13
Fgfr1op2
Pcnt
Snx12
Mars1
Itfg2
Ralbp1
Sec62
Rpl10a
Fam219a
Dnaic1
Slc39a7
Rxrb
Abi1
Cct5
Atpsckmt
Psma1
Etfrf1
Casc1
Rbks
Babam2
Rapgef6
Rpl35
Ahctf1
Ikzf5
Acadsb
Nudt2
Kif24
Rps6
Ccnb1
Zfp180
Nifk
Clasp1
Kctd7
Srcap
Usp37
Cnot9
Tas1r1
Nol9
Thada
Taok1
Papolb
Rpl9
Lias
Spsb4
Ska3
Mrpl57
Ncoa2
Ehd1
Nup205
Rpl13a
Porcn
B230219D22Rik
Sp1
Med13
Trim35
Plekhb1
Ppm1g
Suv39h1
Mpv17l2
Zfp53
Yy1
Ints12
Gstcd
Vezf1
Adpgk
Cd2ap
Cd9
Xrra1
Spcs2
Myo10
Abhd12
Gm2237
Vps28
Klhl18
Kif9
Gas1
Rbm14
Gm21992
Add1
Rpp38
Asf1b
N4bp2l2
Ncapg
Prdm10
Vmp1
Ptrh2
Adss
Mib2
Gm3173
Ncapg2
Abhd11
Ctbp2
Zfp523
Pafah1b3
H4c1
H3c1
Ikbip
Apaf1
Kcnb1
Ergic2
Tbc1d14
Nbeal1
Me2
Ncl
Gclm
Gpr157
Zc3h4
Xpc
Lsm3
Fnbp4
Sde2
Pcm1
Wdfy3
9030025P20Rik
Tab3
2610528J11Rik
Zfp609
Ndufa12
Med1
Mettl3
Gps2
Gjc1
Zfp428
Mtmr9
Taf1b
Fbxo27
Rbm15
Pigo
Eef1a1
Fbln5
Rbpj
Heatr1
Agl
Mmut
Cenpq
Ryr2
Zfp512b
Trrap
Nanp
Tmem218
E030030I06Rik
Tab1
Zdhhc17
Tbc1d32
Lrif1
Ostc
Psph
Cct6a
Gpbp1
Gsc2
Otub2
Fem1b
Fadd
Lrba
Nt5dc3
Ptges3
Camk2d
L3mbtl2
Arl15
Spr
Ccdc12
Hlf
Slx4ip
Mkks
Ddx20
Rtn4
Dctn1
Mindy4
Gid8
Dido1
Cbx1
Rps8
Pnpla6
Tmem143
Syngr4
Trp53bp1
Ell
Leprot
Megf8
Slc30a6
Hsbp1
Men1
Snx11
Jdp2
Ppm1d
Copb2
Clcn2
Khk
Msi1
Znrd1as
Znrd1
Qk
Miga1
Zkscan5
Mepce
Zcwpw1
Smad2
Mterf1b
Zfyve28
Cfap99
Imp4
Ccdc115
Capn1
Stk35
Isl1
Cdk7
Thrb
Cactin
Rtkn2
Cct8
Wwc2
Tep1
Rnh1
Ino80
Prpf4
Cdc26
Mafg
Lima1
Cdk1
Ramac
Timm17a
Tmem116
Nprl3
Erp29
Ddx4
Thyn1
Acad8
Zfp317
Csde1
Sac3d1
Spint2
Vps50
Adam17
Zfp972
Rnf11
Mthfs
Tubd1
Rps6kb1
Mmaa
Slc35b1
Tmem87a
Ganc
Shprh
Ing2
Aftph
Cdkn2aipnl
Spata33
Chmp1a
Usp20
BC005624
H2bc4
H2ac6
Utp6
Wwox
Zfp57
Ranbp17
Prcc
Atad1
Snrnp70
Tcea1
Vps4b
Ppp1r12a
Vamp3
Rpf1
Prcp
Ddias
Vcl
Gm3667
Lhpp
Cdc20
Cdipt
Cdiptos
Nrf1
Rab7
Zbtb22
2410141K09Rik
Col13a1
Zfp184
Rnf212b
Mphosph6
Slc25a36
Tssc4
Nsd1
Snrpc
Rmi1
Hnrnpk
Laptm4a
Kmt5b
Poc5
Phf10
Vamp4
Prdm4
Thap11
Lactb
Scg3
Nanog
Gm14393
Bet1
Ybx1
Nup133
Mppe1
Magi1
Rps11
Spag16
2610042L04Rik
Recql4
Lrrc14
Dtx2
Med23
Rad54l
Pnn
Mob3a
Izumo4
Trim37
Med6
Prepl
Camkmt
Bcl9
Srp19
Tecr
Trpc1
Polr2f
1700088E04Rik
Hdac6
Fbxo15
Vmac
Ndufa11
Dhrs13
Cenpt
Zswim7
Ttc19
Cry2
Zfp13
Naaa
Hspa2
Ift46
Os9
Prxl2b
Mpp5
Cers4
Ppp1r2
Mrps7
Gga3
H4c18
Arhgef17
Ppp2r1a
Zfp398
Hyou1
Xlr5b
DXBay18
Zfp286
Dnal4
Rpe
Coq8a
Mad2l1bp
Cnpy2
Akap1
Qsox2
Mtfr1l
Nepro
Pak1
Polr1b
H3c15
H3c14
Wnk1
H2ac19
H2ac18
Eml5
U2af1
Fmr1nb
Tmem41b
Synm
Plekhg2
Tmem43
Chchd4
Rrnad1
Isg20l2
Pds5a
Nufip2
Etfbkmt
Mis18bp1
P3h1
AU022252
Kansl1
Cep350
Nkx3-1
Arhgap12
Nfe2l2
Tcf12
Degs1
Rangap1
Lyrm7
Ost4
Gpr155
Kbtbd3
Bambi
Gm3739
Ep400
Cfap298
Scaper
Rarres1
Ifitm1
Vmn2r12
Sc5d
Bfsp1
Akap13
Ndrg3
Pdcl3
Ptpmt1
Gm3435
Por
Tdp2
Acot13
Rad23a
Mme
Txnrd1
Cep170
Sdccag8
Cep70
Pgp
Dad1
Abhd4
Cox16
Ubxn6
Hdgfl2
Crot
Dguok
Nsun4
Zfp819
Foxp2
Polr3b
Erf
Gpcpd1
Ppp2r3a
Ercc5
Insr
Dppa5a
Fbrsl1
BC107364
Ptpn23
Vstm2l
Txnl4b
Dhx38
Pfkfb4
Arhgap28
Hnrnph2
Gla
Haus4
Tyk2
Hspbp1
Pigf
Cript
Abcc5
Fyn
Ism2
Ptbp1
Hjurp
A730008H23Rik
Slc35e3
Gpatch8
Enkd1
4933405L10Rik
Gm38396
Rab3ip
Cops4
Gatad2a
Plod2
Aggf1
Zcrb1
Pphln1
Atp6v1f
Tuft1
Prrt3
Pemt
Gabpb1
Hspa9
Dedd
Fignl1
Eno1
Fbxw11
Dus4l
Cog5
Armcx1
Pifo
Gtf2ird2
Pik3r2
Pdlim5
Thap2
Zfc3h1
Terb2
Patl2
Pcca
Galnt16
Rnf8
Rbm44
Serbp1
Relb
Trmt112
Prdx5
Tmed10
Mylpf
Zfp369
Atg16l2
Tbc1d10b
Hnrnpa2b1
Cbx3
Rnf149
Abl1
Pef1
Spata7
Arid3a
Phyhipl
Uvssa
Mad2l2
Otud6b
Foxg1
Tnrc6b
Emc7
Ccdc63
Acin1
1700123O20Rik
Pacsin1
Ssr4
Idh3g
Jtb
Nol11
Acad9
Gapdh
Ccdc62
F8a
Rundc3b
Thoc1
Nkrf
Trip4
Gripap1
Clu
Csnk1g1
Ccdc186
Rest
Klhdc2
Snrpg
Stx4a
Dek
Etf1
Eif4a1
Chmp5
Bag1
Ap2a2
Mzf1
Thoc3
Clptm1
Nvl
Zfp446
Wdcp
Srsf4
Nmd3
Rab38
Zfyve19
Dnajc17
Etfb
Polr2h
Taf11
Hagh
Fahd1
Qdpr
Chst12
Dcaf6
Mpc2
Clpp
Crebl2
Palm3
Sft2d1
Amt
Ttc25
Cpd
Ccnj
Pls1
Tasor
Dcp1a
Sigmar1