ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX208055 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◣ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

H3c6
Eapp
H3c2
Tex14
H4c3
H3c3
H3c11
Sfi1
H3c7
H2bc9
H2bc12
H2ac12
H2bc4
H2ac6
Sspn
H3c13
H2bc18
H4c11
H3c4
Gm3448
Gm3417
9030025P20Rik
H3c10
H2ac4
H2bc6
H2ac10
Gm3435
H2bc1
H2ac1
H3c8
Mpp7
H4c1
H3c1
Gtf2a1
H3f3b
H4c12
Polr2a
H4f16
Tcte3
Ermard
H2bc13
H2ac13
H2bc22
H2ac22
H4bc24
H2bc23
H2ac24
H2ac23
H4c4
H4c9
H2bc11
H2ac11
H2bc15
H2ac15
H3c15
H3c14
H2bc7
H2ac7
H2bc14
H2ax
Mphosph9
2810006K23Rik
H4c2
H4c18
Rps20
H4c8
Atp1b2
Insig1
H4c6
H2bc21
H2ac21
H2ac20
H4c17
H2bc3
H1f2
Gtf2b
Errfi1
Cdkn1a
Jund
Ubb
H2bc8
H2ac8
Csrnp2
Zbtb37
H1f4
Fam53c
Pcna
Tsc22d1
Rcl1
Aplp2
H1f3
Poldip3
Prdx1
Rps12
Ing1
Calr
Hnrnpab
Taf4
Gadd45a
Pnp
Btg2
Fyco1
Rps3
Slbp
Spg11
Rpl3
Skp1
Hexim1
Uchl1
Nufip2
Tmem87b
H2ac19
H2ac18
Sgf29
Arl6ip1
Arl15
Sde2
Hectd4
Fut8
Fus
Ppp1r10
Mrps18b
Rnf19b
Hspa5
Actb
Klf5
Nabp1
Btg1
Napepld
Txnip
Dhx8
Calm2
Dynlt1b
Utp14b
Acsl3
Sub1
Rps27rt
Rps27
Rab13
Jpt1
Smc3
Zfp119a
Mylip
Rft1
Mcl1
Tmem209
Ssmem1
Rdm1
Mbtps1
Haus1
Atp5a1
H4c14
Ccnt1
Nubp1
Mat2a
Rack1
Dnajb9
Taf13
Smarca5
Zfp982
2410002F23Rik
Srsf3
Raver1
Slc9a1
Eif4a1
Sf3b1
Sap18b
Sap18
Arrdc2
Hsp90aa1
Itpr1
Cited2
Eif4g2
Kmt5b
Gls
Dgat1
Ints6
Snrpa
BC024978
Gfpt2
Eloc
Tubb4b
Ccdc12
Snx11
Tjp2
Rps6
Phf10
Hnrnpa2b1
Cbx3
Taf1d
4931406C07Rik
Rpl13
Mre11a
Ankrd49
Ppp1r2
Mtln
Mrps35
Ddx5
Cep95
Ptpa
Crat
Wiz
Aqr
Dusp1
Znfx1
Mtf2
Clcn4
H2az1
Rpl17
Prpf3
Taf4b
Ccnq
Rbm25
Fgf4
Rita1
Mak16
Ddx54
Rps5
Mknk2
Rplp0
Tmpo
Ippk
Cep43
Rps28
Ccdc86
Calm1
Ankrd11
Ddx23
Snrpb
Hmgb2
Rabggtb
Wsb1
Zfp959
Poli
Tob1
Ctsl
Sertad1
Ddb1
Serbp1
Rps23
Pdss1
Rsrp1
Hspa1l
Hspa1a
AW209491
Gm46430
Uspl1
Hnrnph1
Depdc7
Thoc1
Rpl12
Lrsam1
Rpl9
Lias
Slirp
Nrp
Alkbh1
Ubc
Vps52
Rps18
B4galt3
Sphk2
Rpl18
Caprin2
Ddx11
Gk5
Zfp119b
Rps9
Ints14
Mrpl30
Mitd1
Top2a
Ccnyl1
Gpx4
Rps2
Degs1
Hif1an
Timm44
Gtf2f1
Srsf6
Lipo2
Sugp1
Mau2
Tnrc6c
Pole4
Smndc1
Srsf2
Mfsd11
Glul
Eif4a2
Slc2a1
Upf3a
Ttc17
Srsf1
Sin3b
Resf1
Fos
Sgpl1
Dars
Pcnp
Hells
Slc38a2
Styxl1
Mdh2
Arc
Drg1
Ss18
Apc
Otub1
Zzz3
Mrpl39
Dck
Mterf1b
AU041133
Efcab14
Yars2
Ftl1
Rpl23
Rpl8
Trip4
H2aw
Rplp2
Ergic2
Dhx9
Paxip1
Dynll1
Cenpt
Gtpbp10
Smg5
Arhgap19
Fam43a
Cabyr
Nop14
Grk4
Sf3b3
Cog4
Nop58
Kpna2
Ermp1
Zfp207
Gpx1
Impdh2
Tfrc
Map3k7
Serinc3
Npm1
Rpl15
Nkiras1
Ywhaq
Taf12
AW549877
Tubgcp5
Rrp15
Klf6
Hjurp
A730008H23Rik
Mterf1a
Ccdc110
Ier5l
Tmem270
Snx5
Mgme1
Rpsa
Zfp981
Lsm14a
Matr3
Amd2
Amd1
Rbm39
Ppp1r8
Rpl37a
5730455P16Rik
Pitrm1
Qrich1
Marchf3
Ociad1
Atf7ip2
Gtf2a2
Dmxl1
Mrpl45
Zc3h13
Parpbp
Nup37
Ier5
Rbmxl2
Rpl7a
Med22
Kctd20
Pdhx
Apip
Gbe1
Slc5a6
Atraid
Kctd5
P4hb
Eif3a
Mrpl35
Seh1l
Aaas
Rps24
Slc3a2
Tm2d1
Hnrnpf
Gemin6
Srsf5
Pfdn2
Nit1
Dppa5a
Chchd2
Rcn2
Rpl10a
Dbr1
Eef1e1
Slc25a30
Setd5
Commd1
Tcf15
BC005537
Rbm4b
Surf4
Stkld1
Cdkn2aip
Map1lc3b
Zbtb11
Hspa4
Mphosph10
Mcee
Orc5
Kntc1
Mapk1
Pik3r3
Selenok
Prorsd1
Frg1
Bbs10
Map2k2
Eif1
Med21
Puf60
Dtd2
Cisd2
Nat10
Urgcp
Mrps28
Smurf2
Ctdp1
Mob1b
Usp53
Clk1
Ahctf1
Wipf2
Rplp1
Topbp1
Gm2237
Rnf4
Sgk1
Trp53inp1
Msh6
Bclaf1
Psme4
Tcea1
Rnps1
Pnn
Mrpl21
Ighmbp2
Nutf2
Zswim3
Acot8
Nsrp1
Dpy19l4
Rpl21
Enc1
Abraxas1
Anln
9530077C05Rik
Selenof
Hs2st1
Mrpl12
Eif4b
Mad2l1
Pigt
Hmga1b
Hmga1
Ssbp1
Mrpl15
Gcsh
Ddit4
Gapdh
Grcc10
Ddx20
Garem1
Tbrg1
Ppil4
Mtif2
Kit
Tdp2
Acot13
Ube2s
Tipin
2310039H08Rik
Rpl32
Snapc5
Slc25a3
Mad2l1bp
Tmem175
Gak
Morc3
Nipa2
Snip1
Dnali1
Nprl3
Zdhhc3
Exosc7
Zcchc17
Snrnp40
Sephs2
Tra2b
Sesn2
Nasp
Scfd1
Rdh14
Rps27l
Birc6
Thnsl1
Enkur
Rbm8a
Aars2
Otud6b
Ncoa4
Ubr3
Add3
Pbrm1
Gnl3
Csde1
Smad4
Atp1a1
Vcl
Chd9
Fth1
Selenos
Atf6
Mettl25
Ccdc59
Psmb2
Rps10
Tuba1a
Trmt2a
Ranbp1
Dnajb4
Fubp1
Wnk1
Yeats4
Cep295
Vcpkmt
Atg101
Pabpc1
Cd81
Gclc
Rpl19
Kif20a
Brd8
Hspa8
Cdh1
Atg16l1
Rpl31
Yes1
Smtn
Tmem191c
Peli1
Trpm3
Cpsf1
Ptp4a1
Eef1akmt4-ece2
Eef1akmt4
Alg3
Msra
Ppp2r2a
Zfp11
Zfp978
Zfp600
Ier2
Epc1
Rpl7l1
Slc30a6
Mrpl28
Grasp
Cirbp
Rc3h2
Dus4l
Cog5
Dhps
Nfe2l2
Rps13
Rbm12
Cpne1
Rpl35a
Iqcg
Tmem129
Tacc3
Tigar
Cdc37l1
Mob1a
Dhx30
Zfp433
Gm32687
Hpf1
Pou2f2
Inpp5k
Cpm
Rps7
Tmem183a
Bzw2
Ankmy2
Fam204a
Atp9b
Rab21
Rpl28
Wdr43
Tmx3
Usp16
Zfp980
Eef1akmt2
Wdr77
Atp5pb
Depdc1a
Hspa1b
Utp3
Hibadh
Nob1
Zfp944
Zfp758
Zscan25
Ppp2r1b
2410141K09Rik
Usp42
Canx
Hspa9
Mtfr2
Zfp786
Mtg1
Rpl13a
Tsnaxip1
Ranbp10
Dcp1a
Tpst1
Ptpn2
Id1
Sik2
Btaf1
Rpl37
Gtf3c2
Tubb2b
Pradc1
Cct7
Luc7l
Rpl27a
Psmd7
Tubgcp6
Trmt5
Slc38a6
Nup85
Arrdc3
Rpl6
Rnf169
Yif1b
Ndufc1
Chrac1
Ddx52
Ccnf
Rab8a
Odc1
Amdhd2
Mfsd14a
Rpl26
Tbx3
C330018D20Rik
Saysd1
Ncapg2
Selenoh
Slc5a3
Mrps6
Sppl2a
Lmln
Slc25a4
Nup54
Chuk
Psma2
Mrpl32
Nudt1
Coq3
Dhx15
Nol10
Med15
Rad51ap2
Chmp5
Bag1
Rad23a
Tmem179b
Cbx8
Atxn7l2
Gtf3c3
Mecr
Exo5
Wdr74
Rrm1
Alad
Zfp850
Polg2
Stmn1
Anapc10
Abce1
Tob2
Chchd1
G3bp1
Ints8
Cdc5l
Spg7
Pafah1b1
Cox7c
Topors
Smim27
Rab7
Anapc1
Nras
Morc2a
Pum3
Ndufb1
Cpsf2
Ube3a
Mybbp1a
Sptbn1
Nrd1
Scnn1g
Rnf149
Pih1d1
Aldh16a1
Ndufb8
Bzw1
Mtch2
Ipo7
Dnajc24
Zfp868
Leng8
Srfbp1
Kcnk5
Chmp2a
Cacybp
Rcc1
Tmem168
Cul1
Adss
H1f1
Kifc5b
Micos10
Fancc
C87436
Fra10ac1
Cox5a
Asph
Tatdn3
Nsl1
Haus4
Cct4
Rpn1
Tango6
Tmem97
Vps51
Sgo1
Cog6
Ptpru
Gtf2h3
Eif2b1
Adam17
Prpf19
Polr2d
Nqo1
Vamp1
Pdia3
Catsper2
Gadd45g
Akap8l
Hilpda
Lin7c
Lcmt2
Adal
Gmfb
Ndufs2
Ddx39a
Taf3
Slc20a1
Top1
Rfc4
Cks2
Malsu1
Cox16
Azin2
Tra2a
Uqcrq
Commd2
Tardbp
Rpl23a
Ap4e1
Washc4
Smc5
Stat1
Snrnp48
Ube2n
Gspt2
Trim52
Bex4
Tagap1
Eef2
Timm22
Hnrnpc
Trmo
Slc25a5
Cdc42se2
Dnaja2
Phactr4
Rpain
Nup88
Ubxn1
Mnd1
Mff
Raf1
Tatdn1
Ndufb9
Eif5
Zfp213
Adprhl2
Cfl1
Cox20
Mrpl9
Asxl2
Kdsr
Deaf1
Stag1
Ogfod1
Nudt21
Atp7b
Alg11
Rab30
Abhd10
Taf8
Ssb
Rnf32
Naa20
Pet117
Kat14
Xpo4
Etfrf1
Casc1
Cth
Washc2
Akirin1
Gm3739
Atf1
1600014C10Rik
Rsl1d1
Ints4
Lamtor4
Cers5
Abhd17a
Tnrc6a
Zfp219
Mettl4
Edrf1
Pdlim7
Bcl2l1
Taok1
Eci1
Clk4
BC049762
H1f5
Rrn3
2510002D24Rik
Msantd2
Psph
Cct6a
Pum1
Zfp597
Rab33b
Tubd1
Rps6kb1
Creb1
Blmh
Slc35e2
Zc3h18
Rala
Cep63
Anapc13
2610044O15Rik8
Pcx
Ifrd1
Ksr1
Paip2
Sp1
Rps19
Fbrsl1
Ephb3
Sart1
Marcksl1
Gmeb2
Lars2
Tet2
Abcd4
Phrf1
Rpl41
Nfat5
Serf2
Higd1a
Kat7
Ndufa9
Suz12
Prpf4
Cdc26
Zfp7
Cnpy2
Akr1b3
Sqstm1
Taco1
Smim10l1
Hint3
Zfp397
Tbrg4
Wdr27
1600012H06Rik
Inafm2
Zfp979
Arl4d
Acly
Gadd45b
Rsbn1l
Marchf2
Cbwd1
Sucla2
Hdhd2
Zcchc10
Tmsb10
Cibar1
Sumo1
Tbc1d14
Psme3
Tex19.1
Ubn2
Atad1
Phf20l1
Kifc1
Ranbp6
Akap11
Dnaja1
Lrrc8a
Srp54c
Anapc15
Sfxn2
Arl3
Zfand2a
Sh3bp4
Gsto1
Xpo1
1110004F10Rik
Uchl5
Ro60
Tmem14a
Lins1
Zmym1
Sdha
Ccdc127
Vegfa
Slc25a39
H3f3a
Baiap2
Naca
1810009A15Rik
Ube2a
Cstf3
Herc2
Glce
Ndufa2
Ik
Tasor
Prrc2a
Vapa
Rab5a
Timmdc1
Wdr61
Supt16
Stk31
Rpp25
Afg3l1
Dennd6a
Frmd6
Pcif1
Wdr45b
Vamp4
Rnpc3
Tomm20
Psmd11
Med17
Smc6