ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX337439 | Liver
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◣ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

H4c3
Junb
Hspa8
H4c4
H3f3b
Polr2a
Rdm1
Ing1
Jund
Arrdc2
H3c15
H3c14
H2ac19
H2ac18
Nabp1
Btg2
P4ha1
Taf13
Eapp
Mafb
Rsrp1
Calm2
Srsf5
Tob1
Clu
Ints6
Rnaset2b
Dgat2
Calr
Rnaset2a
Ddit4
Slc9a3r1
Gpx1
Hsp90aa1
Atp1a1
H2bc21
H2ac21
H2ac20
Calm1
Hspa5
Tuba4a
H2ax
Epha2
Clic4
Utp14b
Acsl3
Mphosph9
2810006K23Rik
Hexim1
Man1a
Ier2
Zfp36l1
Sde2
Rpl3
Hhex
Vcl
Raf1
H4c18
Vegfa
Taf4
Klf6
Dnajb9
Irs2
Nufip2
Cebpd
Znfx1
H1f4
Hnrnpab
Cited2
Arl4d
Ttc41
Hsp90b1
Ipmk
Jun
Mertk
Fam53c
Ubb
Tex14
Cebpa
Ep400
Hsp90ab1
Actb
Trp53inp1
Sub1
Ctsl
Tubb4b
Tob2
Ppp1r3c
P4hb
Ndufaf3
Rnd3
Zbtb37
Rnf103
Rnf19b
Rhob
Frmd6
Eef1a1
Zfand5
Socs3
Aplp2
H4c9
Fus
Slc9a1
Amd2
Amd1
Unc5b
BC005537
Mknk2
Sephs2
Klf7
Id3
Slc38a2
Vamp1
Plk2
Rhou
Irf8
Susd6
H4c17
H4c14
Acly
Whamm
Mat2a
Dnaja1
Ier5
H4f16
Sspn
Kdm4c
Acy3
Mad2l1bp
Hs3st3b1
Fdx1
Ell2
Prdx1
Shld2
Glud1
Herc2
Mapkapk2
Hnrnpa2b1
Cbx3
Snrpe
Ndel1
Klhl21
Idi1
Rab43
Sesn2
Traf7
Irak2
Eif4g2
Ifrd1
Nudt4
Slc31a1
Fkbp15
Sirt1
Wsb1
Fos
Slc25a3
Hjurp
A730008H23Rik
Tsc22d2
Gtf2b
Sf3b1
Cebpb
Gadd45a
Plk3
Neu1
Insig1
Marchf3
Sqstm1
Tcta
Rhoa
H4c2
Tnrc6c
Id2
Maml1
Nr3c2
Hspb8
H4c8
Trf
Ddx24
Ncoa3
Ncl
Klf10
Mcl1
Ctnnb1
Nfkbia
Ugdh
Nfkbiz
Jpt1
Adk
D230025D16Rik
Selenop
Srsf2
Mfsd11
Gapdh
Tango2
Ube2h
Btg1
Pdia4
Csrnp2
Cd81
Acer3
Peli1
Plec
Fasn
Arl15
Ftl1
Pdia3
Catsper2
Fzd5
Jak1
Gpat4
Hnrnpu
Cyp2d10
Dhx8
Rnd1
Mtarc2
Pcf11
Igfbp4
LOC114841036
Fkbp2
Lgr4
Tpcn1
Iqcd
Myo6
Arl6ip1
Msmo1
Med23
Baiap2
Slbp
Srsf3
B2m
Luzp1
Ccnyl1
Ern1
Ppp1r10
Mrps18b
Raph1
Gpcpd1
Slc25a30
Gtf2f1
Cat
Atf3
Kctd12
Gclc
Eif4a1
Ppp1r15a
Plekha4
Dusp1
Tat
Herpud1
H3c7
H2bc9
Acer2
Lcat
H2-K1
Glul
Haus1
Atp5a1
Sap18b
Sap18
Cyb5a
Smc3
Mterf1a
Tra2b
Csrnp1
Gfod1
Foxo3
Snrk
Cdo1
Sympk
Foxa3
H1f2
Slc16a10
Rbm14
Gm21992
Flnb
Zfp36l2
Sc5d
Fam214a
Ddx5
Cep95
Cirbp
Slc5a3
Mrps6
Tsc22d1
Dnajb1
Stat2
Ttc7
Sorbs1
Degs1
Chchd2
Mapk14
F2r
H3f3a
Ddit3
Kctd5
Snx18
Ppp1r2
Snai1
Angptl4
Ass1
Adap2
Skp1
Selenbp2
Mterf1b
Foxq1
Dnajc3
Adpgk
Jarid2
Dmxl1
Ddost
Isoc2a
Trappc3
Net1
Dbi
3110009E18Rik
Pdlim5
Grina
Pcna
Actn4
Zfp36
Dusp6
Slc30a9
Stard5
Hmga1b
Hmga1
Dnajb4
Nrd1
Pabpc1
Ankrd11
Atp5g3
Scp2
Scarb1
H3c13
H2bc18
Actg1
Ulk1
Ddx3x
Ankrd39
Rbm4b
Ahcy
Hnrnph1
Preb
Fth1
Kcnk5
Cotl1
Mrpl1
Mtfr1
Endog
Cry2
Plpp1
Hsph1
Lipg
Ost4
Ggcx
Jup
Rtn3
Tle1
Osgin1
Kmt5b
Gadd45g
Hspa1b
Ankrd37
Spg11
Impdh2
Dync1h1
Ptprk
Man2b1
Tpi1
Ripk2
Arhgap29
Map2k1
Tdo2
Txn1
Cpeb2
Pdk2
Ostc
Dynll2
Abhd15
Atp2a2
Itpr1
Atl2
Fech
Nedd9
Rbbp6
Pygl
Zfp963
Larp1b
Paxip1
Map2k4
Cap1
Ptms
Glce
Cldn3
Dip2b
H3c6
Dnajc1
Bsg
Pdcd4
Glrx5
Pitpnc1
Hdlbp
H4c11
Tnfrsf1b
Xylb
Bahcc1
Pnp
Kntc1
Ccdc117
Dhcr24
Ero1b
Foxo1
Abca1
Mafk
Lrrc8a
Irf6
Sptan1
Iffo2
Hao1
Pcif1
Daam1
Slc27a2
Alcam
Rnf38
Macrod1
Pik3c2a
Ulk2
Mapk8
Clec2d
Tiparp
Pikfyve
Idh1
Znrf2
Acap2
Serinc3
Plcb1
Fn1
Gtf2a1
Crot
Tbc1d13
Abtb2
Pih1d1
Aldh16a1
Pdhb
Hspa1l
Hspa1a
Hif1a
Litaf
Edem1
Dus1l
Smad7
Mogs
Kdelr2
Mlxipl
Pik3r1
Map4k5
Atl1
Acad12
Erf
Slc20a1
Abca14
Slc66a1
Akr7a5
Nt5dc3
Creld2
Alg12
Dhx9
Farp2
Atg4d
Tpt1
Hmgcs2
Sgk1
Tarbp2
Map3k12
Tuba1c
Zfp568
Ptpn1
Etv5
Zswim3
Acot8
Cpm
Tmem205
Ccdc159
Apob
Ctbs
Stx16
Lifr
Ubr2
Ces1c
Akap8l
Tgm2
Cep43
Rps15
Azin1
Jag1
Ephx2
Gpt2
Fam207a
4833420G17Rik
Pkd1
Fads2
Eif3a
Sh3bp2
Hbegf
Pdlim7
Hacd2
Sec61a2
Gch1
Hmox2
Serpine1
Pdhx
Apip
Cpt2
Dnajb2
Selenok
Aldoa
Pxmp4
Nadsyn1
Fmo5
Dhcr7
Gadd45b
Esyt2
Lbh
Pim3
Efna1
Baiap2l1
Chordc1
Atp5b
Mrpl44
Usp42
Rfk
Csrp2
Rab5b
Stat3
Slc26a2
Wdr3
Gdap2
Pcx
Sertad2
Pklr
Ubxn6
Hdgfl2
Fam20c
Epc1
Pgrmc1
Cstf2t
Alg1
Klf2
Txnl1
Mavs
Errfi1
Gnai2
Itch
Urgcp
Srp9
Raly
Mxd4
Gstp1
Bach1
Nsrp1
Hgsnat
Ccno
Nme1
Pdia6
Ero1a
Ppia
Ivd
Rpl7a
Med22
Manf
Drg2
Tmbim6
Nars
Retsat
Elmod3
Ttyh2
Pkn2
Ncoa4
Sec22b
Trim25
Otud3
Ssbp1
Tle4
C3
Tfrc
Scnn1g
Map2k2
Dlc1
Chka
Gzf1
Pank2
Slc25a33
Mbtps1
Eef2
Etfrf1
Casc1
Fbxo34
Onecut2
Fgfr3
Rps6
Abcb10
Acsl1
Srsf4
Sh3glb1
Fam53a
Tnrc6b
Plpp3
Kyat1
H2-Q10
Aldh2
Styxl1
Mdh2
Mtr
Hnrnpa0
Cyp27a1
Bms1
Pex11g
Mtnr1a
Pi4k2a
Tti2
Napepld
Srp19
Ptma
Top1
Zyx
Fh1
Amacr
Zranb1
Rab33b
Slc25a22
Fkbp4
Selenos
Hmox1
Dlgap4
Ctdp1
Paip2
Mfsd14a
Psap
Sertad1
Txnip
Rabgef1
Arrdc3
Rapgef6
Pnrc1
Msrb1
Rcbtb1
Cdc42
H2-L
H2-D1
Ppdpf
Tmem199
Poldip2
Serpina1b
Gtf3c6
Eif1
Ints8
Kif1c
Inca1
Icam1
Tmem60
Phtf2
Rhpn2
Aldob
H2bc4
H2ac6
Abcd3
Xrra1
Spcs2
Mpc2
Dcaf6
Mylip
Tgoln2
Tgoln1
Evi5
Shb
Phyh
Gpx4
Fra10ac1
Fbrsl1
Prodh
Coro1b
Ppp2r5d
Ndfip1
Dnm2
Mrpl39
Nfyb
Slc18a1
Atp6v1b2
Diaph1
Klhl24
Atp10d
Them7
H4c12
Mapk1
Sned1
Als2
Zbtb8os
Rbbp4
Smad1
Arih1
Hmgcl
Fam222a
Hagh
Fahd1
Sp1
Eprs
Dtwd2
Tpst1
Safb2
Safb
Serf2
Klf3
Efnb1
Eif4ebp2
1810013L24Rik
Pcyt2
Mbd3
Atad2b
Spry4
Slc12a7
Samd1
Sod1
Dstn
Selenbp1
Pigl
Ncor1
Ppib
Becn1
Slc3a2
Slc38a3
Hykk
Hmgcr
Rpl22l1
Gjb2
Uspl1
Rps2
Tmem126a
Ssh2
Fzd7
Map1lc3b
Rplp0
Maf
Baz1a
Pfn1
Cpsf1
Ets1
Pnpla8
Hook2
Ccin
Gls
Vta1
A130010J15Rik
Srsf6
Map7d1
Ssna1
Anapc2
Dedd2
Clp1
Tatdn1
Ndufb9
Prkar1a
Epas1
Agtr1a
Bcl2l1
Dglucy
Ube2g1
Rpl23
Rps9
Alas1
Plag1
Chchd7
Taf1d
4931406C07Rik
Nfe2l2
Brap
Acad10
Atp1b1
Ankle1
Tmx4
Eif3j2
Eif3j1
Plscr3
Xrcc6
Stau1
Desi1
Dgat1
Mrpl20
Rras2
Myo10
Amotl2
Ccng2
Prxl2c
Irf2bp2
Amz2
Rcn2
Ext1
Cth
E4f1
Fam107b
Zmym2
Cdc34
Sgpl1
Bzw2
Ankmy2
G3bp2
Pxn
Zfp1
Ddt
Zfp574
Ppp3ca
Comtd1
Slc11a2
Lpin1
Nemp2
Pnrc2
Tmem123
Zfp446
Serpina3m
Flcn
Wdpcp
Mdh1
Apoa2
Zfp213
Pms1
Ormdl1
Rpl24
Tpm1
Orai1
Efhd2
Chd9
Cnbp
Aacs
Golga1
Cycs
Otud1
Arid4a
Ptbp1
Med21
Sdc4
Xbp1
Tmem14c
Lrrc63
Lcp1
Wdr45b
Tcim
Akap13
Slc30a5
Pitpna
Cep85l
Odc1
Ksr1
Tmed9
Sec61a1
Epb41
Zfp800
Bpgm
Acvr1b
Oaz1
Arl4a
Wdr89
Edem3
Napa
Smg1
Ptp4a1
Slc7a5
Rpl36al
Mgat2
Hdac1
Khnyn
Cyp3a13
Cbln3
Cox5a
Atf4
Midn
Rpl8
Garem1
Cpsf6
Smg5
Ccnl1
Cdk13
Tfcp2
Cyp4a10
Pspc1
Tmem169
Pecr
Gnmt
Cgnl1
Gm20594
Vps52
Rps18
Ppp1r3b
Bmt2
Ociad1
Rpl11
Fnbp1
Tomm70a
Cdk2ap2
Txn2
Primpol
Casp3
Zfp746
Sdhaf3
Arg1
Sacm1l
Lap3
Tubb2a
Tm9sf2
Stard3
Tagap1
Them4
Nuak2
Ndufa12
Rnf181
Ubr3
Crlf3
Ddx20
Top3b
Ier3ip1
Bbx
Bsdc1
Pafah2
Map3k2
Eif4a2
Rps27rt
Rps27
Rab13
Rpl10a
Pts
Pdia5
Plin2
Abcc10
Snrpd3
Gucd1
Zfp119b
Snd1
Sbf1
Mmd
Megf9
Hyou1
Oxsm
Ngly1
Prdx6
Rnf11
Mlycd
Por
Bcas3
Qsox1
Ube2j2
Txnrd1
Ptpn12
Luc7l2
Tkt
Nmt2
Trim65
Rev1
Asb13
Faap20
Zfp69
Rnf14
Lrig1
Ccdc110
Hmbs
Asph
Birc5
Arl8b
Poldip3
Cdkn2aip
Usp53
Surf4
Stkld1
Dnajc16
Ten1
Acox1
Sec61g
Slc25a15
Copz1
Snx29
Setd5
Bclaf1
Fam149b
Ecd
Fem1c
Bdh2
Zcchc14
Gstm6
Slc36a1
Phf14
Ndufa4
Zfp706
Gnpat
2810004N23Rik
Hspa2
Rab5if
Zfp277
Dock4
Pim1
Exd1
Chp1
Mak16
Wbp4