ChIP-Atlas: Target genes

Potential target genes for Hoxd9

Query protein: Hoxd9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416188 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxd9's Target genes

◢ Hoxd9: Average

◢ SRX7416187: Embryoid Bodies

◣ SRX7416188: Embryoid Bodies

◢ Hoxd9: STRING

Pcnx3
Map3k11
Hoxc5
Prdm13
Khdc4
Hoxa4
Crb1
Rbm25
Ttll11
Osbpl9
Hoxd3
Hoxb4
Hoxc4
Arfgef1
Tmem97
Cux1
Wdr7
Mbnl1
Itch
Scn1a
Gask1b
Zfp473
Vrk3
E4f1
Hoxa5
Ngdn
Hes3
Ccdc174
Nudt1
Mrm2
Lmbr1
Poglut3
Chst12
Sumf1
Vamp9
Rabl2
Dynll1
Men1
Poc5
Clasp2
Galk2
Cops2
Ric8b
Ss18l2
Slc7a1
Cnr1
Egr2
Zfp503
Zfp945
Cachd1
Hoxb5
Bbs2
Hibadh
Atg2a
Elmo2
Gcnt2
BC051142
Nacc2
Kmt5c
Mrpl33
Hsdl2
Ubp1
Oxnad1
Dph3
Phpt1
Rabep2
Fam181a
Pth1r
Setd4
Zc4h2
Olfr298
Wnk1
Caml
Krt9
St3gal2
Med25
Sf3a2
Plekhj1
Mutyh
Tshz3
Hes1
Cnot3
Crp
Cryzl2
Spata7
Ell
Ttc1
Ggn
Celf3
0610009B22Rik
Tlk1
Acot1
Stox2
Lrrtm2
Fmc1
Rab18
Got2
Cad
Lysmd3
Gnat3
Ift46
Rnf44
Lrrfip1
Sdhaf1
Kbtbd8
Eif4g2
Cmtr1
Asf1b
Hoxa2
Trrap
Adipor2
Aktip
Tnks2
Fbxo16
D630045J12Rik
Gfod1
Esrrg
Rad9b
Hmox1
Tcerg1
Itgb8
Coq7
Pacrgl
Smarcal1
Actn4
Lta4h
Agfg1
Ankrd6
Zfp628
Dcaf12
Lrrcc1
Tti2
Rhob
Eif2s3x
Grrp1
Slc25a42
Tom1l2
Drc3
Abca7
Efna3
Oacyl
Mybpc1
Ehbp1
Dcaf11
Amer2
Mpp3
Lhpp
Eci1
Rack1
Zfp143
Apcs
Evi5l
Serinc1
Cyp19a1
Fbxw7
Mvb12a
H2bc22
H2ac22
Phactr3
Dennd5b
Ptger2
Lin28b
Dhrs7b
Ajuba
Pyroxd1
Nol6
Gpn3
Fam216a
Ndufs5
Msh5
Sox6
Zfp689
Foxo3
Pclaf
Skida1
Tbc1d10b
Mylpf
Atp6v1g1
Fgd4
Sgpp1
Mrps36
Cntf
Klf3
Prdm10
Etv3
Tshz2
Osbp
Vkorc1
Ppp1r9a
Elavl2
Snx5
Mgme1
Rps23
Ogfod3
Hexdc
Sc5d
Atg4c
Slc9a8
Mbd3
Cntrl
Nr4a2
Snx30
Snx15
Hspa9
Limch1
Dnm2
Pum1
Myo1b
Tdp1
Efcab11
Tgif1
Nap1l4
Ndufs2
Snrpc
Zfp710
Zfp512b
Sox1
Alkbh5
Sos1
Rnf220
Myo9b
Haus8
Hoxa9
Triobp
Nop53
Haus4
Wdyhv1
Gapvd1
H6pd
Sh3bp5
Ap3m2
Usf3
Myo10
H2az2
Clasrp
Postn
Lpar4
Rnf111
Tcim
Nfam1
Abcg2
Cxxc5
Snap25
Zfp536
Sp5
Glce
Hpgd
Slc25a25
Supt3
Eef1akmt1
LTO1
Lbr
Trio
Repin1
Ppan
Manea
Eif3c
Acyp2
Dhx16
Nedd9
Arid3a
Garre1
Rab28
Psap
Lsm6
Cops3
Chchd5
Wdr6
Maf
Hoxb9
Nup107
Zfp708
Dad1
Abhd4
Rtcb
Vmo1
Spcs1
Glt8d1
Slc35f2
Naxd
Stk33
Calml4
Rufy3
Kif21a
Rai1
Ppp2r2b
Fignl1
Selenof
Hs2st1
Npc2
Isca2
Nrxn1
Smug1
Hddc3
AB010352
Stat3
Daam2
Spag9
Uba1
Rab33b
Nell2
Pik3ca
Acod1
Nr2f2
Ccdc42
Rnf122
Uts2b
Mtmr6
Atp5l
Slc9a7
Zdhhc16
Exosc1
Lars
Tbp
Gm3448
Gm3417
Nr2f1
9030025P20Rik
Ttc21b
Pvr
Nebl
Bco1
Zfp354b
Commd1
Zrsr1
Zfp334
Rnf10
Zbtb18
Srpk2
Smarca2
Nub1
Spp2
Foxj2
Aplp2
Ica1l
Ano3
Erbb3
Sall1
Stxbp5
Vps4b
Rbm39
Zfp146
Tpm3
Ankrd40
Rbl2
Dhx9
Vamp1
Elp3
Mllt10
Prickle2
Trim67
Rnf4
Atp5o
Fer
Zfp672
Wdr41
Elk1
Arfgap2
Mad2l2
Draxin
Zbtb24
Pik3r1
Mrps14
Eif3f
Meis2
Pkd2l1
Zcchc17
Snrnp40
Dipk1a
Urm1
Tcea3
Xlr3b
Tia1
Dnaja3
Dct
Auts2
Lama1
Tfpt
Prpf31
Crebrf
Lrp8
Vash1
Rcan2
Tatdn1
Ndufb9
Klhl9
Supt7l
Slc4a1ap
Baz1b
Fosb
Mterf4
Mrfap1
Alyref2
Cenpj
Pax2
Tex14
Ank3
Zkscan1
Rarb
Gm3667
Miip
Fv1
Gabpb2
2310033P09Rik
Zfp84
Tmem11
Serpinb8
Rpl3
Kifap3
Tmem100
Natd1
Ecpas
Shoc2
Bbip1
Taf4
Cklf
C2cd5
Iftap
Schip1
Insr
Fbln1
Actr1b
Car14
Elavl4
Tent2
Tcte3
Ermard
Exoc1
U2af2
Tfb1m
Mapk1
Gpr19
Otx1
Map2
Frmd4a
Tbc1d10c
Ppp1ca
Samd4b
Gmfg
Akap11
Zfp51
Prkag1
Tyk2
Radil
Gm6712
Vill
Celf2
Lnpep
Gm3435
Dhcr7
Gm5165
Hyal2
Mrpl4
Tmc6
Ccdc9
Scp2
Sall4
Neurog2
Pofut2
Usp4
Zfp521
Dnajb5
Rnasel
Pxmp4
Unc13b
Grb10
Tspyl2
Ufsp2
1700029J07Rik
Tsen34
Mboat7
Kif3b
Nsg2
Shcbp1
Wdr5b
Arg1
Zfand2a
Tecr
Aebp1
Mfge8
Tubb4b
Fez1
Ccng1
Ppp1r14c
Krt222
Trappc4
Rps25
Shc1
Cks1b
Csf2ra
Hgh1
Akirin2
Hikeshi
Cdc45
Cfdp1
Arid4a
Ednrb
Esyt1
Kbtbd6
Fbxl7
Oscar
Ndufa3
Slc25a18
Trim23
Trappc13
Shld3
Dus1l
Cdh9
Stac
Elp6
Map3k4
Sgo1
Ralyl
Zc3h6
Gpr12
Zfp318
Phf5a
Aco2
Chst2
Micu3
Cenpc1
Flad1
Cabp1
Prr5l
Trp53bp2
Tut1
Agk
Bbc3
Rnase1
Npff
Spata48
Ccp110
Tmem60
Phtf2
Aven
Arhgap36
Rab40c
Cotl1
Tppp3
Mpped2
Mrps18a
Zfp58
Ngef
Neu2
Polg
Psmc4
Acss2
Rap2b
Hoxb3
Map1b
Os9
Cdca7
H4f16
Leo1
Nubpl
Scd1
Eaf2
Chd4
Umad1
Rpa3
Ppm1k
Zbtb39
Armc3
Pgk1
Maz
Ahi1
Cox20
Rfx4
Ddx39b
Ccdc107
Tro
Rab13
Ptch1
Slc25a39
Top3a
Smcr8
4931428F04Rik
Zscan2
Tulp3
Setx
Zfp865
Spock2
Clcn4
Ints6
Ing3
Nmnat3
Hpgds
Sgf29
Sertad3
Bckdk
Ppt1
Hoxb1
Armc1
Gucy2g
Usp14
Mettl4
Mapk6
Arid1a
Cdk19
C330007P06Rik
Atp6ap2
Gcat
Vstm2l
Cpeb3
Smc3
Glul
Oip5
Nusap1
H2bc6
H1f4
Tcf20
Usp48
Hoxa3
Rps14
Rab5b
Ints9
Hmbox1
Taok3
Nt5c3
Snx32
Bcar3
Ric8a
Bet1l
Ift43
Usp40
Psip1
Klhdc4
Dennd1b
Brf2
Anxa2
Mn1
Shroom2
Rfx1
Zfp422
Klhl5
Meis1
Sdccag8
Cep170
Zbtb5
Use1
Pcm1
Chac2
Fam222b
2610042L04Rik
Ccpg1os
Ccpg1
Stil
Mov10
Cct5
Atpsckmt
Nfkb1
St18
Ndst4
Fam110a
Ropn1l
Car3
Kcnip2
Wipi1
Art3
Grina
Ska2
Prr11
Smpd1
Ube4b
Hoxd8
Map9
B9d1
Psmd5
N4bp2
Zfp960
Psmb8
Dpy30
Rangap1
Kcne1l
Eps8
Zc3h8
Slc9a6
Gm10406
Phc2
Stoml2
Mapkapk5
Pole3
4933430I17Rik
Nfyc
Sh3pxd2a
Slc25a51
Necap1
Rab11b
B230307C23Rik
Knl1
Tmem168
Cul2
Wrn
Purg
Dusp23
Ranbp2
Rab3gap1
Dchs2
Uqcrc1
Igf2bp3
Xrcc5
Epc1
Stt3a
Sp2
Tcta
Rhoa
Prnp
Prn
Fam160a1
Zfp707
Gm3411
Snd1
Slc27a1
Arl13b
Pbx4
Tefm
Ahcy
Nemf
Mtnr1a
Tceal8
Btf3l4
Ehd4
Spata25
Mospd3
Rdh11
Zfp68
Prex2
Supt6
Kat6b
Mobp
Ncoa7
Cdk6
Btbd8
Atg10
Ikzf5
Acadsb
Tstd2
Ncbp1
Ets2
Azin2
Hexim2
Galnt7
Sh3gl3
Zfp869
Tbc1d23
Chaf1b
Gid4
Tmem186
Pmm2
Pknox1
Cdr2l
Acot11
Eif2b2
Aasdh
Ogdh
Srrd
Hps4
C1qtnf3
Arpc5l
Slc16a7
Rbm33
Xab2
Pet100
Trim63
Tgfbrap1
AI597479
Wfikkn1
Ndufaf4
Prim1
Tmem175
Gak
Ptma
Mpv17l
Hook1
Gtpbp1
Tmem167b
Camsap2
Abr
Lgr4
Thoc1
Arhgap9
H3c6
Hps5
Gtf2h1
Serpinb6a
Ripk1
Xpnpep3
St13
Stac2
Lingo4
Tle4
Mmachc
Ccdc163
Cluap1
1700037C18Rik
Mrnip
Akr1e1
Zc3h12c
Selenop
Tcf12
Hspa12a
Tmem260
Fam174b
Gabrg1
Ints14
Ddx5
Cep95
Glipr1l3
Efr3a
Zfp608
Tm9sf4
Kif2c
Rdh14
Tesk2
Katnb1
Gtf2h2
Fzd10
Jhy
Psat1
Zfp384
Tmem67
Cutc
Cox15
Ntng1
Zfp141
Shh
Xrn1
Ppm1b
Prmt8
Eef1a1
Smyd2
Plxnb1
Ppil1
Slc46a3
Leng9
Insig1
Eda2r
St6gal1
Fbxo47
Kcnn3
Cldn1
Art5
Btbd1
Gm4791
Sdcbp
Fzr1
Grb2
H2bu2
Bmpr1b
Txnrd3
Hyou1
Ccdc60
C9orf72
Tbcb
Polr2i
Ptprq
Flywch1
Gfus
Adh1
Srbd1
Jmjd1c
Cox6c
Calr3
1700030K09Rik
Rnf43
Qars
Deptor
Hoxb7
Prcp
Ddias
Gng2
Chmp1b
Lsm4
Ctps
Rpl5
Lyst
Ift74
Rlf
Zkscan5
Tomm20
Atf4
Fam135a
Vcp
Ccdc30
Tal2
Cks2
Slc2a5
Ckb
Npepps
Ubxn6
Hdgfl2
Mocs2
Uba52
Ptp4a1
Ssbp3
Ten1
Acox1
Tmem184c
Fryl
Psmg1
Rnf40
Ccdc189
Brms1l
Zfp938
Wipi2
Ccna2
Ppm1a
Angpt1
Nanp
Tmem126a
Septin3
Aftph
Rps6ka2
Taf8
Fam13c
Fam110b
Tmem178
Gm3325
Dennd6a
Uba6
Ubr2
Ssc5d
Prickle1
Rab27b
Ccz1
Tnfrsf14
Kcnh2
Gtf3c6
Rbfox2
Ttc23
Katnal2
Nmd3
Dnah5
Ip6k2
Nsrp1
Nudt15
Tmem160
Ttc3
Pigp
Prkd3
Utp15
Ankra2
Iqgap1
Adh5
Ino80b
Gsk3a
Olfr598
Immp1l
Elp4
Dlg4
Zbed5
Tube1
Fam229b
Tnrc6b
Uggt1
Smarcad1
Enkd1
4933405L10Rik
Exog
Ferd3l
Tmed3
Polr3gl
Cstf2t
Slc25a1
Hdac9
Rdm1
Crtac1
Zfp563
Tmem209
Ssmem1
Vxn
Tctn2
Tshz1
Kif22
Mt3
Tma7
Ccdc51
Rpia
Scube3
Sat2
Ctso
Zbed3
Pramel12
Fam13a
Elovl5
Tmco6
Ndufaf3
Jakmip2
Scgn
Timp2
Kctd9
Cdca2
Akap1
Sod2
Gm51425
Nans
Trib2
Nus1
Scml4
Vps11