ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100251 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◣ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG1354
Obp99b
bark
dco
CG3358
Tpst
CG46311
Sur-8
CG34280
CG34279
Aps
htk
InR
CG10600
sgll
CG2993
Tak1
Nc73EF
N
pkaap
crp
RpS21
CG3104
CG43693
CG9030
pdgy
unc-5
RpS28a
Mgat2
Axn
nrv2
ush
VhaAC39-2
mthl14
E(bx)
Lasp
Dab
CG43954
CG14903
Toll-7
CG13689
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
SK
Ubr1
CG13896
bcd
nxf4
CG8306
goe
fiz
CG14406
shot
wgn
E(Pc)
DCX-EMAP
Ste12DOR
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Ptpmeg2
stl
CycB
Fancm
IM18
Eglp1
CG43209
CG10332
mtd
Tim17b1
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33882
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33910
His2B:CG33902
velo
CG12236
Hml
CG12617
Myd88
CG5790
Irk1
mRNA-cap
His4:CG33869
wcy
CG4949
Oli
eIF2beta
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
RpL37a
CG5214
CG17734
sgg
SteXh:CG42398
Dup99B
PDZ-GEF
lectin-28C
Npc2b
CAHbeta
Pax
CG13085
Alp12
Cul2
eag
Atpalpha
Bub1
Bsg25D
Gmap
CG14837
TM4SF
CG11788
CG10444
CG7956
CG13192
CG42268
CG2990
CG33557
pzg
CG12974
Reg-2
CG9920
CG34274
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33813
His1:CG31617
His1:CG33804
Rack1
mts
ctrip
RpS26
pHCl-1
ebi
AP-2alpha
CG8944
CCT6
scra
CG1360
capt
Tango14
CG32425
RpL11
Stt3A
bves
CG12986
CG31909
mtSSB
caps
galectin
knk
Pomp
Oda
omd
flfl
S
ast
Moe
EMRE
Yif1
CG6425
RpL21
CCT5
waw
bbx
gry
CG32276
CG9215
CG8097
Idh3a
CoRest
fdl
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
His4:CG33875
His4:CG33873
His4:CG33871
RpS19a
Rok
Incenp
Br140
RpL5
RpL3
CG6693
geminin
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
CG7785
CG42354
CG42353
CG9281
CG15601
Gbeta76C
CG8765
Ste:CG33247
Ste:CG33237
Ste:CG33243
Ste:CG33239
Aatf
CG6454
RpL36A
Megf8
CG5746
Nopp140
CG7148
mus312
CG42307
mrva
Ste:CG33236
CG2076
Grip91
mbo
CG3402
His1:CG33852
cana
cmet
RpS18
plu
CG8908
CG15456
trc
CG32221
CG30349
CCT8
Eip63E
Rev1
MED30
RpS28b
l(1)G0320
His2B:CG17949
CG11334
CG11333
HnRNP-K
fax
RpL30
Uba1
snRNP-U1-70K
His4:CG33881
His4:CG33879
His4:CG33877
eIF3f1
CG6791
stmA
SmE
CG34132
vls
bwa
RpS20
CG17271
l(1)G0004
jb
wls
Adck5
Sf3a2
CG42588
CG7744
CG43346
mAcon1
CG43345
zip
uzip
CG8549
atl
Syx18
Maf1
wda
CG13827
pnt
Ste:CG33238
rad50
mRpS29
Frl
CG13484
Vps29
Tfb4
CG7900
Prosalpha1
CG30382
CG12822
Atg10
RpS4
CG7044
CG5745
p47
Rubicon
prage
Adar
Pgant4
RpS7
CG12818
Bruce
RpL23
CG13531
Strip
PHGPx
glo
COX5A
Sgt
BicD
eIF3e
RtGEF
La
lmgB
lmgA
CG17834
PTP-ER
mahj
Gss2
Gss1
eIF3j
VhaM9.7-b
COX8
DNApol-eta
CG14562
CG12702
CG42514
CG14407
CG2202
Spx
Rbcn-3A
eIF3d1
Xbp1
RpL31
CG12929
uri
DNApol-alpha60
RpLP0
CG7130
ifc
Ranbp21
Elys
Tctp
SdhC
rtv
Dlic
Mp
RpS9
dia
Rhau
Cyt-c1
su(Hw)
RpII15
spn-F
CG1750
Patr-1
CG3995
Klp64D
snama
lqfR
CG13850
TM9SF4
SLIRP1
anox
CG42676
JTBR
Ski6
CG16812
Patronin
eIF3b
sinu
r-l
dmrt93B
RpL26
Cp1
CG3902
RpS10b
MED4
Cdc27
Rpn13
Pif1B
Pif1A
CCT7
RPA2
CG18853
dock
CG3862
DJ-1alpha
Abd-B
Svil
CG31279
nej
lace
CG12007
Fkbp59
CG13306
CG14535
CG14762
for
CG10357
CG6405
beat-IIIc
CG15025
fal
CG2991
LanB2
GILT2
Wdr62
Eh
Dpit47
Adf1
CG11444
CG5886
CG14545
stc
Pop2
CG6928
CG6345
Asator
Ufd1-like
NaPi-III
Gp150
NLaz
CG10232
Spn28Db
CG9344
RpS11
CG34033
CG1648
cpo
TfIIA-S
Syn2
mdy
IFT52
COX5B
Pli
Nhe3
ftz-f1
His2Av
ball
LSm7
BuGZ
Jafrac1
Lap1
ADPS
Raf
CG42495
CG13293
Vm32E
Gycbeta100B
dnt
CG13086
CG33632
Rlip
CG17565
Eaf6
Mtpalpha
tzn
CG3698
Snp
Pdi
Pez
Cpr
CG13501
CG9018
ACXD
CG33177
CheB93a
CG15536
CG10038
ome
CG43121
Ufl1
CG1943
CheB93b
CG4293
Appl
Csp
CG11523
CG17855
GlyP
CG4259
CG3556
Alg3
CG3638
CG43658
Nelf-A
CG3337
OXA1L
Rsbp15
CG4860
CG14321
CG6878
CG30286
CSN3
CG11456
pan
CG10947
dpr20
Drp1
retm
frj
CG31928
CG7509
jp
Poc1
CG6329
mIF2
Anp
Mbs
mud
CG5189
CG30120
PNUTS
Diap1
CG42560
CG42559
CG6040
CG13692
CG11885
salr
Dll
CG32195
CG9399
PGRP-LA
CG9220
alpha-Man-IIb
CG4390
Gug
CG6983
CG10011
Pcf11
Cyp6a22
Mtp
PheRS-m
CG9988
CG6195
CG31220
CG9171
fz4
ASPP
Tlk
CG43678
kug
CG34054
CG33465
Panx
CG9485
CG15517
Rala
CG4991
CG16700
CG13907
GCS2alpha
CG11873
CG34458
CG30380
CG30379
Pka-C3
CG6903
CG4041
dlt
Cdc37
alpha-Spec
CG4822
GXIVsPLA2
SNF4Agamma
CG32700
CG18418
CG10804
CG12531
CG32107
CG43066
CG34106
beat-IIIa
CG2493
Sep1
CTCF
Pms2
CG30076
asl
Nepl16
CG31076
CG14635
ND-75
CG1632
TMS1
bun
hwt
Spindly
IFT57
CG9500
RhoGAP100F
FeCH
Vha68-1
Tor
tow
Eo
prd
pk
CG9044
Dlg5
CG4970
SLO2
Naprt
CG1090
dpr6
chif
Rab14
l(2)34Fd
Spn77Bb
CG8490
CG3078
CG31087
scramb1
stj
ovo
CG42814
CG42813
gudu
CG5149
Edg84A
Faa
Tie
CG11353
CG11659
CG11391
CG43107
HmgD
Paip2
Xrp1
CG31688
CG6106
CG42680
Socs36E
Gip
ec
CG9164
CG17681
Ca-beta
CG9855
pyd
Men-b
CG6051
312
sr
CG7906
Ugt303B2
Mpcp2
CG5151
Trx-2
CG34244
CG18808
OtopLc
CG43246
nrv3
TfIIS
CG10222
CG34435
vas
solo
Tpi
CheA56a
CG30122
Nlg3
RpI135
CG6891
CG32117
CG12520
Atox1
Alk
Oseg2
Cyp6a18
CG10365
MCU
galla-1
exu
mthl10
CG4734
CG14997
Sdc
CG11356
Osi8
CG15650
CG5213
CG12985
CG34417
Vha44
Hmgs
Lk6
mRpS18C
CG12355
Ugt36A1
fz3
CG31960
per
gol
CG15358
CG13699
CG6966
lbm
Sh
PsGEF
hbs
CASK
CG6839
cib
CG13288
CG10486
CG42544
CG43133
eater
tw
mRpL13
CG10602
CG10211
nemy
Galphaq
CG45086
Cpr31A
mib1
CG18109
MFS3
Hers
CG44094
stumps
ro
nolo
CG31008
T48
piwi
Galphai
CG31517
SP1029
vri
chas
HP5
Evi5
Nhe2
CG12991
chn
THADA
CG9692
Lnk
CAH3
Rbp6
CG17746
Tgt
CG5126
CG16852
CG34345
DIP-iota
CG17544
CG2082
Golgin245
raw
Tis11
BTBD9
Atg8a
jagn
Nha2
CG9331
wit
CG30026
CG10943
CG31798
cindr
TER94
GlyS
PGAP2
Clp
cno
CG6184
NaCP60E
msi
Cluap1
Etf-QO
PhKgamma
CG13912
CG3748
frtz
Abl
Act42A
CG13430
BORCS7
l(2)efl
CG7987
Cul1
CG12159
CG9380
aralar1
CG13872
klar
inc
CG2924
smash
shep
png
GstS1
Sgs3
CG31145
TotM
CG14022
alt
Taf1
BBS8
Camta
Teh1
dpr18
CG12395
CG7655
Plp
X11Lbeta
CG8927
Rca1
CG42662
csw
Lac
CG31516
aux
Vha55
Snx3
vvl
dpr2
Orc4
CG12849
CG18135
CG9806
cnc
CG15535
pico
RpS17
MTF-1
modSP
Nup205
Sfp84E
CG6465
CG17258
Sar1
CG14186
PRAS40
CG42788
stet
spirit
CG12065
nuf
side-VI
beat-Ia
Myo31DF
CG6094
Gnf1
CG3009
Sap-r
yrt
CG17575
antr
Sarm
CG14990
Fas1
alph
Unc-115a
Zip89B
UQCR-Q
CG32642
RpL41
CG14795
CG3566
CrebB
Hr39
Proc-R
Vav
rictor
CG12054
Cdk2
CG8087
CG12075
CG31041
CG42797
eIF4G2
CG33111
cic
Cpr51A
LysRS
CG15531
CG30197
ey
ATPsynC
DNApol-iota
Mfe2
Exn
nan
CG6707
CG46387
P5cr-2
smg
CG5087
Ugt316A1
Sfxn2
SP555
CG14042
CG14852
CG32196
CG5823
Ziz
Obp28a
jar
CG8861
nudE
CG7692
CG4593
CG6885
Top2
dpr16
CG18528
RpS10a
p23
CG32812
CG2121
dve
Hacd2
CG10026
tko
l(1)G0469
CG17167
lobo
CG33056
CG33054
CG10512
jumu
Amun
CG14077
CG34375
CG43844
EDTP
tun
aqz
Oatp30B
simj
Smyd4-4
CG3603
bel
Karybeta3
CG31637
Mcm7
CG1607
CG5674
raskol
Tpl94D