ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CTCF | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◣ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CARPB
CG1354
Ipk1
Cib2
unc-5
Hr51
Abd-B
Tpst
CG46311
CG32633
CG32631
CG11816
CG43980
snu
Sid
CG33346
Rubicon
CAH3
VhaM9.7-d
Actn3
Tak1
CG42579
shot
DJ-1alpha
sick
Neu2
CG7519
CG7202
Mef2
kirre
N
dco
Chchd3
Sox100B
Su(var)2-HP2
Sec61beta
Had2
CG12863
RapGAP1
Imp
sbr
CG15210
CG15209
CG42700
Svil
soti
CG43693
TfAP-2
Sox21a
CG31275
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
Wnt4
Spn
CG32295
mof
Usp30
CG16721
croc
Ptpmeg2
CG3106
Cam
CG7888
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
CG10481
Fancm
CG8119
CG8117
bcd
Ama
Pde1c
CG16762
CHES-1-like
CG15478
zen
Nc73EF
Cpr73D
CG3358
RpLP2
CG8311
prage
CG44439
CG30369
CG2291
CG14760
CG14759
Adar
mRpS33
ema
CG17565
CG14881
Pde8
Indy
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
retn
Socs16D
CG12986
wgn
CG31279
stl
blw
CycB
CG42260
CG30271
dar1
InR
ScpX
CG17597
CG10600
Jupiter
CG6808
CG14711
CG14710
nxf4
CG43290
CG31496
CG33120
CG31752
CG17321
Shmt
CG3726
CG12236
CG8306
pkaap
crp
Cyp303a1
CG17329
CG13258
CG34384
CG31473
CG4020
Act5C
sgll
CG3014
CG2993
CG18268
Ubr1
CG8945
CG4955
crol
CycY
CG14974
CG10359
CG10357
CG34165
CG15282
Aps
nej
btd
CG16898
wcy
CG4949
CG43077
Tsp68C
Hml
CG8757
CG8750
CG43184
Npc2b
CG9920
CCHa1
lace
CG8303
CG5089
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CkIIalpha-i3
CG13896
CG13895
siz
His2A:CG33808
CG12007
mtDNA-helicase
RpS2
Bka
Dys
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
RpS28a
Mgat2
CG7920
Axn
shop
htk
nAChRalpha6
Fkbp59
CG4537
CG34183
CG31191
Atpalpha
dnc
CG33226
CG30287
CG30286
CG30283
Prm
Fhos
CG6576
CG13306
CG14762
lectin-28C
TwdlE
CG14535
PDZ-GEF
Gr89a
Decay
Cad89D
CG42342
CG15429
Atet
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
Odc2
Odc1
Sur-8
CREG
slbo
bs
for
GILT3
GILT2
Ldh
CG10163
Best2
RpS21
CG3117
CG3104
CG2991
CG2983
CG9380
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
mthl14
E(bx)
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
EbpII
Ebp
Drgx
beat-IIIc
Lasp
Dab
CG9692
CG43954
SNF4Agamma
CG9171
CG15025
CG7956
fal
Gbs-76A
cmpy
CG34260
CG14186
CG14185
CAH15
Wdr62
sNPF-R
SPE
CG13192
otp
Ndae1
CG31909
CG13786
Scp2
CG14903
CG14891
obst-E
gol
eIF3d1
CG18754
CG16710
CG1688
EcR
CG15919
LanB2
Toll-7
rtv
Ran
Lint-1
Dlic
CG32668
Fmr1
CG15201
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
CG46301
Gsc
CG13689
CG3335
Rx
Thor
Pgant4
CadN
Eip75B
wdp
CG9497
CG31663
CG15358
sced
geminin
Opbp
Dpit47
Adf1
GABA-B-R3
Eaat2
nol
NaPi-III
CG32074
mtSSB
CG6126
CG31287
Mtpalpha
msl-2
Pif1
ND-PDSW
CG31776
Eh
CG14331
CG14330
jp
brwl
zip
uzip
CG15615
larp
CG12730
ham
CG9410
CG15908
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG5890
CG5886
CG14545
Got1
CysRS
CG30094
stc
CG15269
viaf
Pop2
Grip163
CG6928
CG43658
RpL37a
Rrp46
Irp-1B
CG6345
CG6325
ind
Rpn12R
CG43678
CG13465
BobA
CG5565
CG5561
CG5556
CG31924
CG13962
Asator
Sod1
ush
CG6118
mRpL2
Ufd1-like
FoxK
Mst36Fb
CG43339
Gp150
CG10365
CG9018
ACXD
Spn28Db
Spn28Da
SmE
CG7102
CG34132
CG43338
Act88F
stg
SP1029
CG45544
CG31445
NLaz
CG31659
CG14346
ms(3)K81
SPARC
Rb97D
CG5500
nau
CG10232
CG13280
CG13272
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
Oseg2
abd-A
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Sr-CII
RpS11
CG8858
Or98b
Moca-cyp
Gfat2
Egm
dila
CG30001
Lk
CG34039
CG12009
CG34268
CG34267
CG12617
Act57B
cpo
CG12017
Myd88
Cpr100A
CG15546
CG15545
flr
CG10222
tbrd-1
TfIIA-S
Pli
CG42758
Rim
CG43445
bowl
bark
CG31960
DNaseII
CG7785
mdy
Cse1
Syn2
CG9005
CG7794
cort
Nse1
Nhe3
Tsp
bor
asun
Mst89B
cm
CG4593
CG42308
CG32736
CG3032
Usp47
DnaJ-1
sim
CG43063
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
ball
Lerp
IntS12
His2Av
AP-2alpha
caps
CG42268
sens
CG11327
CG2841
ftz-f1
Kank
tkv
Bub1
Bsg25D
raskol
Cyp4ac3
Lap1
CG12853
ADPS
Gycbeta100B
CG15556
CG15554
CG14270
CG12206
CG10804
CG10803
CG10802
scrib
Cyp12e1
CG46270
glu
LSm7
ChLD3
BuGZ
HisRS
Ggt-1
CG6470
Bx
Mp
RpS15Aa
Jafrac1
IP3K2
CG15747
CG10257
CG42354
CG42353
phyl
Oaz
Cht6
CG33557
CG2990
GNBP2
GNBP1
Capr
CG42495
Ca-beta
Cpr76Bc
Cpr76Bb
mRpL14
Raf
Ilp6
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
CG6481
ssp6
CG6610
CG13295
fra
CG8818
CG8569
CG33632
CG13293
achi
CG13151
Tlk
Rbfox1
Cpr76Ba
qvr
E(Pc)
CG42346
dnt
CG13086
Vm32E
CG4788
CG17349
scyl
CG2016
Oatp30B
Loxl1
CG11334
CG11333
CG32301
Timp
CG43055
Rlip
CG5697
CG17278
Sytalpha
RagA-B
CG11970
Men
CG5568
CG18586
CAHbeta
mthl2
TM9SF3
Eaf6
CG10591
Lmpt
gcm
CG31709
pdgy
eag
CG9030
Or67c
Pax
CG13085
Alp12
CheB93b
CheB93a
CG1124
Ugt49B2
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
CG43332
flz
tzn
Spc105R
Six4
CG3698
lectin-37Db
lectin-37Da
Lectin-galC1
Snp
CG44249
Pex3
Pdi
FucTA
CG32147
CG12316
CG13501
CG13500
TotX
Grik
Pez
Cpr
ome
CG4914
CG43121
CG7907
par-1
CG2199
hdly
Lsd-2
CG9065
CG33178
CG33177
Eglp4
Eglp2
Ref1
Dpck
CG1943
CG15130
Ptp61F
312
Rab3-GEF
CG5599
CG15027
MBD-R2
CG4115
CG10041
CG10038
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
CG44956
CG14082
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
CG10949
Arpc2
fz2
Srpk79D
Csp
CG11523
Zasp52
unk
VhaAC39-2
CG13829
Ufl1
CG1965
CG1105
Reg-2
CG13893
ncm
RpS26
shep
elav
CG4293
Appl
Rich
Ddx1
CD98hc
Irk1
Sfp84E
Os-C
Gr59d
Eglp3
SIFaR
RpI135
CG13538
Cpr30B
CG17855
CG13114
CG13113
CG13025
sigmar
l(2)dtl
CG5504
Alg3
apt
Nrt
insv
GlyP
CG4259
CG3556
Lst
Cdk4
Oli
CG6870
CG3638
CG11403
CG9705
Sesn
CG46429
CG18128
Esyt2
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
Edg91
CG7509
CG34281
CG18808
CG14329
CG14327
CG12502
Pdp1
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
mtd
velo
Poc1
ImpL1
CG14110
CG14107
CG10171
Ist1
CG8549
CG7065
CG1077
Elba2
Osi1
TyrRII
CG14321
dikar
galla-2
OXA1L
CG6418
CG6409
Blos4
CG34435
CG34434
mRpS18B
Kua
CG13970
Smyd5
Oga
Nelf-A
CG5862
CG3337
CG15040
Lgr1
Atg8b
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Fs
CG10947
scb
Prp31
Msh6
CG7011
CG6878
CG32170
ND-B17.2
Arpc5
Dci
PGRP-LC
PGRP-LA
CSN3
CG3288
CG13255
CG11456
dpr20
CG14326
CG14324
CG14323
AttD
Or67d
CG14325
CG9220
Alp11
pan
sm
CG9777
mRpL55
cdi
CG6040
ATPsynD
CG9498
Drp1
CG15394
RpL37b
Gr59c
CG42703
retm
frj
Rchy1
CG9876
CG32264
CG9527
CG9743
wts
dj-1beta
cindr
nerfin-2
CG33784
Alp13
ppk7
ppk14
CG9500
CG42784
fl(2)d
CG6329
CG13339
CG46468
CG42327
CG33128
CG31928
CG31926
CG31661
CG18131
ninaA
Glut3
bbx
mthl1
SNRPG
RpS19a
Rok
Prat2
obe
Trissin
CG5213
waw
Sep1
mud
mRNA-cap
Fbxl4
CG32599
CG1434
CG6347
CG6337
PK1-R
CG12402
slim
Ttd14
CG5189
CG30120
CG5906
Prp19
RpS7
CecC
CecB
CecA2
CecA1
Anp
mIF2
Ppn
east
PIG-K
Mbs
Diap1
CG14715
CG33783
rswl
CG17669
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
dbe
aru
PNUTS
CG33465
Sprn
CCDC151
Obp99d
Dup99B
Rsph3
RtcB
Rab9
Gug
CG6983
ex
CG31324
SP1173
CG8301
CG33654
CG4213
salr
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
mdlc
CG4390
Rala
Dll
CG42851
CG9593
CG9896
CG42853
CG16789
CG9399