ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474253 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◣ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

wcy
CG4949
Ubr1
CG1354
CG43407
sr
salr
mib1
Abd-B
gsb-n
GlyP
CG4259
CG6329
Rubicon
vvl
CG31279
CG17565
ftz-f1
CG5151
CG9855
galectin
Fas3
sgg
PGAP2
Clp
Toll-7
Lasp
Dab
CG43954
CG43693
Svil
Nc73EF
CG10038
Myd88
mub
CG9896
RpS21
CG3104
CG2991
caps
kmr
CG32425
alpha-Man-IIb
stl
CycB
Ptpmeg2
lectin-28C
CG14535
Tlk
NLaz
Vha44
Hmgs
Drp1
Ufd1-like
NaPi-III
CG12236
fiz
CG14406
CASK
prd
CG18135
egl
CG13560
CG5214
CG17734
shot
DJ-1alpha
bun
CG31223
AdSS
CG13192
CG10947
Dhap-at
CG5112
unc-5
CG34172
mthl14
E(bx)
CSN3
CG11456
pkaap
crp
N
mtd
CG10600
CG32195
eIF3d1
GILT2
esn
Gmap
Tpst
CG46311
Dll
Mtp
Irk1
Lmpt
pk
CG12828
Pez
Cpr
ap
CG3358
MFS3
InR
Nelf-A
CG3337
RpS28a
Mgat2
Axn
vri
Sur-8
CG34280
CG34279
CG31743
CG31522
dnt
CG13086
stc
chif
E(Pc)
Oatp74D
CG6333
CG6345
velo
CG8549
CG42814
CG42813
Aps
IFT52
COX5B
Fancm
CG11444
betaCOP
Eaf6
pyd
Mbs
Diap1
CG34033
CG1648
Mtpalpha
CG13692
CG11885
Rlip
Fkbp59
CG9920
Cyp6a18
Dif
CG5043
OXA1L
Csp
CG11523
prage
Adar
l(1)G0469
CG9344
Sarm
Pdi
CG12985
Pgant4
dsx
RpL7
Ripalpha
Atpalpha
dco
CG5189
CG30120
CG31140
Dpit47
Adf1
beat-IIIc
ball
His2Av
Nedd4
eg
CG6878
CG2841
CG33144
CG9650
Pop2
CG6928
TfIIA-S
Pli
zip
uzip
CG5886
CG14545
CG11334
CG11333
Obp99b
Atf3
CG1142
CG9932
ush
CG42495
DCX-EMAP
PNUTS
Awh
JYalpha
Raf
CG14903
CG33632
RpS11
CG6405
fal
jim
CG45428
CG11226
mam
pnt
Jafrac1
CG12617
mIF2
tzn
CG3698
Kdm2
CG8306
Pms2
CG34325
CG32572
Reg-2
CG17698
Nmdar1
CG43845
LanB2
Hr3
CG46321
Lim1
shn
Gug
CG6983
Mccc1
Acf
CG31076
tey
cindr
cv-2
fray
CG7694
Oda
SmD3
nord
Bub1
Bsg25D
Wdr62
CG6106
CG6195
CG31220
CG32521
cib
mdy
RhoGAP100F
FeCH
Vm32E
nej
qm
Srp19
GstD1
C15
nrv2
fz4
CAP
nrv1
SCAP
CG4822
ich
Top1
Indy
CG9331
CheB38c
Tet
CG33229
dve
milt
CG13689
Alg3
Exn
CG42806
Cp1
LSm7
BuGZ
Fas1
Pax
Trf2
lawc
Pgk
Bacc
bi
Spn27A
CG34310
zld
CG42354
CG42353
repo
CG15536
Edc3
RpS19a
Rok
numb
yin
CG2930
RpS28-like
Pde8
IM18
Eglp1
CG43209
CG10332
ebi
AP-2alpha
CG13306
CG42544
betaTub60D
PDZ-GEF
CG42747
Poc1
yem
Ctl2
CG34347
NetA
ss
CG31145
tapas
rn
jp
Ugt36A1
Lap1
ADPS
opa
HmgZ
Atxn7
kon
Tak1
htk
RpS7
Anp
svp
CG6891
Moe
Trc8
tsh
E2f1
Drgx
CG42268
Gycbeta100B
side-VIII
E5
CTCF
CG43155
ana
CG31690
Sgs3
CG7512
Eip63E
Lrr47
Fatp1
Karybeta3
CG12007
nos
CG11779
Tsp96F
SppL
skd
Pdss2
tow
Cpr31A
psq
NKCC
Ufl1
CG1943
CG3556
CG42741
CG2493
Myo61F
CG7509
per
Glut4EF
dlt
alpha-Spec
Cdc37
slbo
RpL37a
CG11873
CG31909
beat-IIIa
CG34106
spirit
CG12065
Pcf11
Cyp6a22
fru
CG9399
daw
pdm3
dwg
vilya
waw
bbx
Dys
CG13085
Alp12
zf30C
Spindly
IFT57
kay
CG42663
CG7737
Men
px
pbl
CG8281
Idh3a
CoRest
dnc
CG43795
PheRS-m
Fcp1
CG3511
Mob2
CG6903
CG4041
CG7029
CG15414
bnl
Doc2
fax
TMS1
jumu
CG4914
Akap200
Pepck1
CG45087
CG10492
CG4496
Pdp1
ATP8B
qless
mRpL32
Mmp2
Rala
CG32700
grn
Snoo
blow
Asator
bbg
mtSSB
18w
Tim17b1
Acyp2
nsl1
CG30069
retm
frj
trn
Mes2
MEP-1
CG42245
Eh
CG9171
smo
CG17078
CG9018
ACXD
sdt
ASPP
blw
CG42260
Sox14
Bx
HisRS
CG6470
CG1146
CG5953
CG3655
twz
Smyd4-4
Men-b
CG6051
CG34423
Mthfs
pyr
CG8170
for
Galphao
CG12895
rgn
CG1090
Df31
CG3894
CG12848
caup
CG31729
CG12986
rt
brun
CG2614
Eip75B
CG1620
CG15784
poly
Dic1
CG34417
CG31869
Octbeta2R
CG33695
l(2)34Fd
Rab14
kdn
Gp150
Ptp10D
Fas2
CG31183
Ppcs
CG6040
ATPsynD
mRpL55
lace
CG4038
CG34396
bip1
CG43658
CG7991
CG31928
CG13896
Hakai
CG43107
RpL24
pnut
CG9220
Liprin-gamma
CG11659
CG11391
Gdh
cerv
CG7872
Panx
CG9485
CG11788
CG10444
eIF4H1
CG34015
CG6959
CG2865
CG44094
stumps
CG7987
CG3788
trol
omd
flfl
bark
so
rtv
Dlic
dpr16
otp
Nhe3
sdk
pzg
CG12974
Ubi-p63E
Sc2
CG15025
scramb1
CG34274
tara
Rrp4
ItgaPS5
magu
CG12290
Pkc53E
hoip
Pka-C1
Hnf4
Nepl16
CG4797
spz
wgn
Duox
RpL23A
CG8230
hdc
salm
nvy
Ptip
CG17855
Mp
Rh5
shep
unpg
Pde11
sty
PAPLA1
Rbsn-5
CCKLR-17D3
CG8180
plx
Rab23
CG13204
PAN2
AIMP1
jing
CG9436
TfAP-2
Fmr1
klar
SecCl
Dh44-R2
Vsx1
inv
RapGAP1
x16
Hrb27C
nop5
Tab2
mip40
inc
sta
CG18507
Fim
CG7956
Mapmodulin
Ref1
JMJD7
CG10738
LamC
Gli
Snx27
CG10348
eIF3f1
form3
Mef2
Pal1
wit
Itpr
scaf
CG7101
CG44325
raw
CycT
SNF4Agamma
Tgt
CG5126
AGBE
Xrp1
pns
CG12091
Rbp6
CG32982
disco
CG14721
CycG
Med
gry
CG32276
reb
SPoCk
RhoGEF3
CG30089
png
CG8617
Psa
cue
Ser
CG3719
CG32813
bib
CG9003
CG42674
lbl
GAPcenA
CG7182
Sgt
BicD
RpL34b
CG8132
CG34117
Ppa
DPCoAC
CG5180
CG14421
Cdk2
tim
NK7.1
snRNP-U1-C
gukh
TMEM216
Cks85A
Cdc5
CG1233
Lam
rno
mri
rols
spi
ptc
cdm
eIF2beta
Pomp
CG13707
CG15365
Dak1
Sld5
mbc
Nup98-96
lbm
CG42340
CG3918
bcd
trh
CG31875
Ndf
SoYb
slow
CycB3
Srp14
EloB
Poxm
Pits
mts
Rack1
CG3919
stwl
CG13631
CG7920
dlp
RecQ5
CG10962
Rgl
Cad86C
Npc2b
Pym
CG30467
Hacd1
Taf4
Cdep
Rsf1
REPTOR-BP
stau
Spn55B
Ets21C
Trx-2
CG2990
CG33557
Sec61gamma
CG12237
RhoGDI
CG8004
l(3)psg2
ct
CHES-1-like
Hph
RpS26
Cad87A
CG31211
jigr1
CheA56a
CG30122
CG14837
Fhos
CG5787
kug
Tm1
Dscam1
SP1173
CG45218
ITP
pico
Smox
nito
Sep5
tws
CG4199
Rtca
Gip
Su(var)2-HP2
Sec61beta
Act5C
CG9776
ana2
CG13751
MrgBP
Ggamma1
RpL24-like
CG5276
CG6006
RhoGAP19D
rdo
elfless
fkh
CG30460
CG15236
Abl
sick
mRpS14
Naa15-16
CG32533
fs(2)ltoPP43
aop
MED19
CG7430
CG1628
GstT4
PGRP-LA
CG12024
gcm
eve
Mhcl
CG9815
Naprt
CG43736
Sema1a
crol
Pdk1
ImpE1
Nup205
RpL3
CG6693
Snx17
coro
CTPsyn
CG45071
Set2
CG1998
CG6356
abd-A
melt
futsch
Arc1
fry
CG16717
wnd
CG4733
cbt
CG6420
CG14244
CG4390
Trl
ND-75
CG1632
Dup99B
NP15.6
CG5757
CG5098
CG13894
mamo
MFS10
kek5
Tango10
CG7378
CG12483
14-3-3zeta
CG18766
CLIP-190
Lrch
Poxn
mud
woc
bab2
Fsn
Dp
spir
tun
CG13907
Ten-m
CG42668
Eip74EF
Taf7
EMC1
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33813
His1:CG31617
His1:CG33804
fy
emb
CG1673
Moca-cyp
Gfat2
CG8568
SCaMC
dally
kermit
Lpin
Usp15-31
bs
mirr
CG10165
croc
CG9692
eRF3
SC35
amon
CG34054
brk
nxf4
SLO2
gudu
CG5149
CG42680
sim
foxo
Cbp20
CG7218
fig
Spn28Db
Fer2LCH
Fer1HCH
PAN3
CG32486
wake
tou
LBR
Sirt2
CG4360
arr
rdx
kraken
CG4291
Incenp
Br140
wg
cnc
CG3847
CG14442
CG13117
verm
CG5181
CG34162
CG31706
cwo
dsd
Tusp
Sym
Madm
Pka-C3
CG9044
alpha4GT1
CG3542
CG11109
Arf79F
Cbl
crb
CG5715
DNAlig3
CG10232
kn
dUTPase
Art8
mRpS22
CG5003
Psc
pad
SF2
Hex-A
DUBAI
Tmem18
CG8490
HmgD
Ten-a
RpL9
Nup154
geko
org-1
vig
Zw
CNBP
CG9849
CG8300
CG4617
Lac
RpL13
Dref
Vsx2
conv
Sps1
CG13300
CG13293
Pde6
kel
Nlg3
kibra
ths
Ir48c
Gbeta13F
Vha13
Nup58
CG1572
upd1
Pde9
chb
Cyt-c1
Ptx1
Wdr33
CG2182
chrb
Reg-5