ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474261 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◣ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ubr1
CG32195
DCX-EMAP
beat-IIIa
CG34106
CG43693
wcy
CG4949
fiz
CG14406
Cyp6a18
Abd-B
sr
CG31145
CG2841
Eip75B
galectin
pyd
GlyP
CG4259
Sarm
CG1354
gsb-n
salr
mub
CG43407
NLaz
Rubicon
shot
DJ-1alpha
CG5151
Irk1
beat-IIIc
CG12985
CG6329
Gycbeta100B
chif
Fancm
Nc73EF
Nlg3
prage
Adar
Sur-8
CG34280
CG34279
Mtp
Jafrac1
ftz-f1
Oatp74D
CG6333
CG1090
CG9920
mtd
yin
CG2930
ap
Tpst
CG46311
l(1)G0469
caps
Vha44
Hmgs
Smyd4-4
Pop2
CG6928
RpS21
CG3104
CG2991
CG6106
N
prd
Ptpmeg2
Drp1
CG10038
Tak1
CG42814
CG42813
Vha68-2
CG11444
sgg
CASK
fal
CG34325
CG32572
mib1
Fas3
CG14903
CG9692
cindr
bbg
mdy
CG15414
CG42747
CG12236
CG9855
eg
lectin-28C
CG14535
OXA1L
vvl
mthl14
E(bx)
Rlip
Nedd4
trn
Pax
dnt
CG13086
CG43155
Svil
Lasp
Dab
CG43954
MFS3
CG18135
pkaap
crp
Mbs
Diap1
CG4822
Gmap
ich
CG6345
CG32425
CG9344
Lmpt
Exn
CG5886
CG14545
esn
Toll-7
CG10600
CG42340
CG3918
CG5214
CG17734
CG10947
Myd88
CG9896
Pgant4
egl
CG13560
CG31279
CG17565
Mp
Eaf6
stl
CycB
eIF3d1
GILT2
IFT52
COX5B
CG9932
CG31223
AdSS
Dhap-at
CG5112
milt
otp
CG33144
Indy
Aps
LanB2
CG1142
dco
CG34274
unc-5
CG13293
SecCl
CG8306
Ten-a
Tlk
ush
CG9650
InR
zip
uzip
salm
CG5790
CG3556
Atpalpha
RpS28a
Mgat2
Axn
PGAP2
Clp
vri
Raf
TfIIA-S
Pli
alpha-Man-IIb
tey
betaTub60D
Lrr47
Fatp1
CG42354
CG42353
Pms2
Ufd1-like
NaPi-III
CSN3
CG11456
jing
CG12617
CG31076
NetA
Mtpalpha
nej
CG6405
l(2)k05819
CG3652
CG3358
CG13689
CG42268
per
Dif
CG5043
E5
Pdp1
pyr
E(Pc)
png
cnc
bun
RapGAP1
caup
Tie
CG11353
Tsp96F
SppL
CG31690
Men
mlt
CG34033
CG1648
Pdi
TMEM216
Cks85A
CG6878
Txl
CG10576
skd
Pdss2
CG32521
ems
dve
CG17855
DNAlig3
mIF2
Asator
CG31743
CG3847
Fkbp59
tsh
Duox
CG34172
Lap1
ADPS
Gug
CG6983
Mmp2
svp
CG31140
knk
stj
CG13192
CG5189
CG30120
pk
CG12828
CG44094
stumps
CG7987
CG32700
PDZ-GEF
CG11334
CG11333
Pde11
Oda
SmD3
RpL7
Ripalpha
CG43107
Rala
dsx
CG42544
jp
CG13085
Alp12
cib
scaf
CDase
CG2224
Dll
kdn
Obp99b
jumu
RpS19a
Rok
RhoGAP100F
FeCH
Pez
Cpr
CTCF
CG13707
CG3625
CG34054
for
nos
CG11779
CG17698
Tim17b1
CG10348
CG6903
CG4041
SCaMC
velo
CG8549
CG33229
CG13872
rdo
elfless
QC
Dpit47
Adf1
Trc8
fz4
plx
Rab23
Eh
side-VIII
nrv1
CG13306
CG11873
betaCOP
tzn
CG3698
Nelf-A
CG3337
tow
Mccc1
Acf
SP1173
cv-2
Men-b
CG6051
RpS11
sdt
NKCC
mam
stc
tai
Gli
Karybeta3
PNUTS
Dys
CG31928
CG7509
CG18808
fru
RpL37a
kmr
Bub1
Bsg25D
CG7737
CG18528
EcR
nrv2
Top1
CG34347
shn
CG3494
CG3492
C15
Fas1
retm
frj
CG9331
CheB38c
CG9399
grn
CG33632
Kdm2
CG3036
RpS7
Anp
bib
Glut4EF
CG32264
AGBE
wg
Myo61F
Vm32E
Pdk
Vsx1
mts
Rack1
Dyrk2
Ser
ebi
AP-2alpha
CG6006
so
Gp150
CG13692
CG11885
kon
Psc
CG15536
Poc1
wit
CG42806
CG8230
Cp1
daw
E2f1
hdc
vg
pdm3
numb
RpS28-like
ths
Ir48c
Pdk1
CG2493
CG32982
qm
Srp19
Naprt
CG31869
zf30C
Fhos
Trl
aux
CG31516
htk
glob1
CG30069
Ald1
Pkc53E
LSm7
BuGZ
CG4496
lace
CG4797
CG3919
stwl
CG7991
Wdr62
cdc14
Nhe3
Hr3
CG46321
slow
CG15025
Csp
CG11523
kug
Snoo
CG7231
spz
CG7920
opa
CG31729
l(2)34Fd
Rab14
Eip78C
CAP
CG7029
muc
ss
tapas
CG6040
ATPsynD
mRpL55
Cdep
ball
His2Av
CG13907
Mes2
Alg3
bcd
CG9281
CG15601
CG6959
CG42495
Atxn7
chrb
wun
Gbeta13F
wun2
sano
CG3078
CG3009
Ugt36A1
Acyp2
nsl1
CG33695
rt
CG31517
Gpdh1
Panx
CG9485
HmgZ
CaBP1
cdm
CG1146
Idh3a
CoRest
Ufl1
CG1943
omd
flfl
Sirt2
CG4360
Mmp1
cact
Amun
jim
CG45428
CG11226
pzg
CG12974
Rsbp15
CG4860
Tsp86D
SelR
Drgx
CG43658
sty
Mob2
CG10019
CG14984
CG42663
Itpr
PheRS-m
klar
Cpr31A
chb
Lim1
bnl
form3
Spn27A
CG34310
blw
CG42260
Gdh
CG15822
CG13896
spirit
CG12065
Tgt
CG5126
smo
CG17078
Pgk
Bacc
IM18
Eglp1
CG43209
CG10332
CG42560
CG42559
waw
bbx
CG34423
Mthfs
PCB
CG31909
CG4612
Brca2
rtv
Dlic
yem
Ctl2
CG12163
Df31
CG31522
Dh44-R2
fax
TMS1
dwg
vilya
bi
Trap1
Bap170
CG9171
PAN2
AIMP1
CG6891
CG13699
CCKLR-17D3
lola
Ntan1
Fcp1
CG3511
gcm
CG10337
CG6195
CG31220
Cyt-c1
thw
ppan
Tet
Ca-beta
CG5757
CG5098
jar
Nepl16
gudu
CG5149
fray
CG7694
ana
CG2765
CG34417
CG7956
tou
Edc3
Doc1
px
Mapmodulin
Baldspot
pbl
CG8281
Awh
Act5C
Pcf11
Cyp6a22
Trf2
lawc
Pka-C3
Scr
Ubi-p63E
Sc2
mirr
twz
Vsx2
ASPP
crb
CG5715
rut
brat
SLO2
nuf
mfr
Tsp66E
red
CG1628
Reg-2
eIF2Bepsilon
Ocrl
CG5953
crol
hoip
Pka-C1
aop
CG13135
CG14968
TfAP-2
rgn
Sema1a
CG31176
unc-104
MsR1
CG9815
unpg
CG3566
CG17387
CG14721
CG30089
CG14321
btd
cic
tun
dnc
ssp3
msi
CG11109
Arf79F
lbl
bark
kay
IntS6
CG4078
rib
MED19
CG7430
RhoGAP68F
ND-SGDH
CG31183
Bx
HisRS
CG6470
psq
CG31324
Pu
CG4286
magu
CG13894
par-1
Galphao
E23
Cyp49a1
apt
CG30184
Pepck1
CG45087
Dup99B
CG7110
CG10859
PAN3
Syx13
poly
Dic1
CG2990
CG33557
CG2121
tup
Atf3
CG13506
inc
sta
Rrp4
ItgaPS5
gpp
Dmtn
Inx2
Eip63E
Fie
kermit
Lpin
Nmdar1
CG43845
CG13300
pico
Arc1
SCAP
mura
RnpS1
Tsp
shep
l(3)psg2
ergic53
CG10822
Pgant2
CG7720
CG12483
Lk6
abd-A
CG8180
DPCoAC
CG5180
spi
Su(var)2-HP2
Sec61beta
sut1
slv
rn
CG31688
cbt
p38b
CG9008
Wnt4
CG9018
ACXD
18w
CG42675
CG17258
Ppcs
CG14837
ETHR
Hnf4
sim
Oaz
Mef2
CG15365
Tm1
CG45218
disco
trh
Gs1
brwl
Uba1
CG34375
CG7101
CG11686
Ace
CG32369
sdk
CG5969
CG32428
CG1673
stan
CG4267
bol
Dhpr
blow
Sap130
Atg1
cathD
Sms
INPP5E
CG11131
CG42673
l(2)01289
CG9164
Sobp
chas
kn
Dhit
Tsp42El
RpS26
CG32486
sns
TAF1B
Invadolysin
Psa
cue
Tret1-1
CG17839
CG15784
CG11145
Nha2
Spindly
IFT57
CG6966
RpL24-like
CG5276
kraken
CG4291
CG5292
bip1
MEP-1
JMJD7
CG10738
CG42245
CG14304
yuri
reb
RhoGEF3
CG3420
CG9436
CG9220
CG10492
sax
Nop17l
Spn28Db
CAHbeta
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Ssdp
CG7985
cad
CG42741
Usp15-31
Ptip
GramD1B
ps
CG8170
CG33116
mthl10
Hers
Jasper
CG15528
CG10232
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
pnt
CG31875
Ndf
SoYb
Sox14
pes
UQCR-C1
CycC
stai
CG14762
Reg-5
nord
CG12007
CG42680
tara
Nup205
drm
eIF3f1
chinmo
CG3788
disco-r
eya
oc
Sema2b
CG11659
CG11391
rdx
Hakai
CG4914
CG30460
CG14502
Phk-3
slbo
HmgD
Lrrk
tx
scramb1
Akap200
CG9967
Cyp6v1
CG12986
CG18766
eater
Ubc6
CG4116
CG42724
CG10286
CG43795
kek5
Mocs1
CG6310
CG31793
ATP8B
Liprin-gamma
B4
Impbeta11
regucalcin
CycB3
mud
CycE
Glo1
PSR
Muted
CG7071
odd
CG10737
Rcc1
Abl
Gr97a
CG5521
CG9304
qless
mRpL32
Sym
Madm
foxo
CG15545
rec
CG43318
ome
CG43121
CG10211
tkv
trol
tim
Sox21b
CG44325
CG18507
rdgC
Rbp6
MRP
PGRP-LA
CG43116
E(spl)mdelta-HLH
CG9044
14-3-3zeta
Nhe2
Tl
CG1572
JYalpha
CG5853
geko
Vajk1