ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2638363 | S2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◣ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33813
His1:CG31617
His1:CG33804
Abd-B
bun
sgll
CG2993
CG43658
Lasp
Dab
CG43954
CG12057
CG12115
CG14837
CG1090
ctrip
Trx-2
InR
CG13306
Pax
pkaap
crp
CG43693
GlyP
CG4259
CG43711
ush
mdy
dco
Aps
mtd
Tim17b1
unc-5
shot
DJ-1alpha
Pgant4
Mtpalpha
CG10947
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
Snoo
lectin-28C
CG14535
CG7785
nxf4
CG9920
Myd88
CG4293
Appl
RpS28a
Mgat2
Axn
CG6878
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
wcy
CG4949
RpS21
CG3104
CG2991
Muc30E
Tpst
CG46311
CG12007
Tlk
Irk1
zip
uzip
Sgs3
CG7512
RpS11
CG1354
CG3556
Dll
Panx
CG9485
Ufd1-like
NaPi-III
Fkbp59
CG8306
Asator
Syn2
CG42268
CG10038
Nelf-A
CG3337
CG13896
Nc73EF
mtSSB
Muc96D
bcd
retm
frj
Obp99b
CG3358
CG11883
Rubicon
Sur-8
CG34280
CG34279
CG7956
CG10600
CG15025
CG6195
CG31220
CG8034
nrv2
CG31909
mthl14
E(bx)
CG14903
eIF3d1
caps
ebi
AP-2alpha
CG34054
CG8500
MtnA
Atpalpha
stl
CycB
NLaz
Sgs4
Pig1
Muc26B
Hml
nej
IFT52
COX5B
Mtp
Rbp6
fal
cpo
CG9692
prage
Adar
Gycbeta100B
Reg-2
Mur82C
fax
CG2839
CG13192
Npc2b
CG15536
CG31928
PGRP-LA
galectin
CG43066
CG43133
CG6329
Su(var)2-10
lace
OXA1L
Rsbp15
CG4860
CG7509
CG13907
PGAP2
Clp
Dd
CG1486
CG14762
CG13689
CG10232
CG34033
CG1648
CG13293
Rlip
alpha-Man-IIb
CG32147
Pex3
Muc4B
for
zf30C
E(Pc)
CG31279
CG12236
Dpit47
Adf1
tzn
CG3698
CG10011
CG9988
Mip
CG32425
CG30026
N
CG6405
Wdr62
bark
CG6040
CG32195
Nepl16
Ih
CG12986
rtv
Dlic
CG33632
Eaf6
IM18
Eglp1
CG43209
CG10332
Oli
CSN3
CG11456
Mbs
Rala
fab1
CG33981
smt3
zfh2
CG33465
jim
Nckx30C
CG5214
CG17734
Bub1
Bsg25D
CG9018
ACXD
ome
CG43121
velo
pan
PNUTS
CG8549
CG9399
CG43107
CG6106
CG42680
Prip
CG3842
orb2
CG15023
CG15022
polo
Larp4B
CG1077
CG46026
CG11360
wgn
htk
PDZ-GEF
CG5886
CG14545
Spn28Db
ftz-f1
CG17855
Gug
CG6983
cib
GstS1
14-3-3zeta
Cbl
CG42514
Sox15
CG43291
Sgs1
Eh
CG11334
CG11333
mIF2
CG5189
CG30120
PheRS-m
CG44094
stumps
SP555
CG14042
Fhos
Mhcl
Akt1
pHCl-1
lwr
CG32052
CG14448
CG8607
Adhr
CG44666
CG11873
Tak1
Toll-7
Nhe3
Pdi
CG13692
CG11885
CG4390
VhaAC39-2
CG32117
CG12520
Rap1
fdl
Gfat1
AGO1
Ptpmeg2
LanB2
stc
Gp150
ASPP
Pka-C3
GXIVsPLA2
mib1
nos
CG11779
His4:CG33869
sax
Nop17l
CG43267
CG42494
CG43123
CG32284
CG15635
CG13204
Dup99B
png
Fancm
CG6345
Csp
CG11523
Fuca
CG11714
CG6429
CG6421
sif
CG14516
CG45545
brwl
jp
beat-IIIc
sau
CG15387
CG11470
CG7573
CG7567
CG12464
Svil
Ubr1
CG10357
GILT2
CG11444
Pop2
CG6928
RpL37a
CG9344
CG12617
TfIIA-S
Pli
ball
His2Av
LSm7
BuGZ
Jafrac1
Lap1
ADPS
CG42354
CG2990
CG33557
Raf
CG42495
Vm32E
dnt
CG13086
CG17565
CAHbeta
pzg
CG12974
CG9030
Snp
Pez
Cpr
CG13501
CG33177
CheB93a
Ufl1
CG1943
CheB93b
CG42353
Alg3
CG3638
CG14321
CG30286
pdgy
dpr20
Drp1
RpS19a
Rok
Poc1
RpS7
Anp
mud
Diap1
CG42560
CG42559
salr
CG13085
Alp12
CG9220
Mp
waw
bbx
Pcf11
Cyp6a22
CG9171
eIF2beta
fz4
CG43678
kug
HnRNP-K
CG15517
CG4991
CG16700
DCX-EMAP
GCS2alpha
CG34458
CG30380
CG30379
CG6903
CG4041
dlt
alpha-Spec
Cdc37
eag
CG4822
sgg
goe
SNF4Agamma
CG32700
CG18418
CG10804
CG12531
CG32107
beat-IIIa
CG34106
CG2493
Gmap
Sep1
CTCF
Pms2
fiz
CG14406
CG30076
asl
CG31076
CG14635
CG5790
ND-75
CG1632
TMS1
Idh3a
CoRest
hwt
Spindly
IFT57
CG9500
RhoGAP100F
FeCH
Vha68-1
Tor
tow
Eo
prd
pk
CG9044
Dlg5
CG4970
SLO2
Naprt
dpr6
chif
l(2)34Fd
Rab14
Spn77Bb
CG8490
CG3078
CG31087
scramb1
stj
CG34274
ovo
CG42814
CG42813
gudu
CG5149
Edg84A
Faa
Tie
CG11353
CG11659
CG11391
HmgD
Paip2
Xrp1
CG31688
Socs36E
Gip
ec
CG9164
CG17681
Ca-beta
CG9855
pyd
Men-b
CG6051
312
sr
knk
CG7906
Ugt303B2
Mpcp2
CG5151
CG34244
CG18808
OtopLc
CG43246
nrv3
TfIIS
CG10222
CG34435
vas
solo
Tpi
CheA56a
CG30122
Nlg3
RpI135
CG6891
Atox1
Alk
Oseg2
Cyp6a18
CG10365
MCU
galla-1
exu
mthl10
CG4734
CG14997
Sdc
CG11356
Osi8
CG15650
CG5213
CG12985
His2A:CG33808
CG34417
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Vha44
Hmgs
Lk6
mRpS18C
CG12355
Ugt36A1
fz3
CG31960
per
gol
CG15358
CG13699
CG6966
lbm
Sh
PsGEF
hbs
CASK
CG6839
CG13288
CG10486
CG42544
eater
tw
mRpL13
CG10602
CG10211
nemy
Galphaq
CG45086
Cpr31A
CG18109
MFS3
Hers
ro
nolo
CG31008
T48
piwi
Galphai
CG31517
SP1029
vri
chas
HP5
Evi5
Pomp
Nhe2
CG12991
chn
THADA
Lnk
CAH3
CG17746
Tgt
CG5126
CG16852
CG34345
DIP-iota
CG17544
CG2082
Golgin245
raw
Tis11
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
BTBD9
Atg8a
jagn
Nha2
CG9331
wit
His2B:CG33882
His2B:CG33904
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33910
His2B:CG33902
CG10943
CG31798
cindr
TER94
GlyS
cno
CG6184
NaCP60E
msi
Cluap1
Etf-QO
PhKgamma
CG13912
CG3748
frtz
Abl
Act42A
CG13430
BORCS7
l(2)efl
CG7987
Cul1
CG12159
CG9380
aralar1
CG13872
klar
inc
CG2924
smash
shep
CG31145
TotM
CG14022
RpL30
alt
Taf1
BBS8
Camta
Teh1
dpr18
CG12395
CG7655
Plp
X11Lbeta
CG8927
Rca1
CG42662
csw
Lac
aux
CG31516
Vha55
Snx3
vvl
dpr2
Orc4
CG12849
CG18135
CG9806
cnc
CG15535
pico
RpS17
MTF-1
modSP
Nup205
Sfp84E
CG6465
CG17258
SteXh:CG42398
Sar1
CG14186
PRAS40
CG42788
stet
spirit
CG12065
nuf
side-VI
beat-Ia
Myo31DF
CG6094
Gnf1
CG3009
Sap-r
yrt
CG17575
antr
Sarm
CG14990
Fas1
alph
Unc-115a
Zip89B
UQCR-Q
CG32642
RpL41
CG14795
CG3566
CrebB
Uba1
Hr39
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
Proc-R
rictor
Vav
CG12054
Cdk2
CG8087
CG12075
CG31041
CG42797
eIF4G2
CG33111
cic
Cpr51A
LysRS
CG15531
CG30197
ey
ATPsynC
DNApol-iota
Mfe2
Exn
nan
CG6707
CG46387
P5cr-2
smg
CG5087
Ugt316A1
Sfxn2
CG14852
CG32196
CG5823
Ziz
Obp28a
jar
CG8861
nudE
CG7692
CG4593
snRNP-U1-70K
CG6885
Top2
dpr16
RpL3
CG6693
CG18528
RpS10a
p23
CG32812
CG2121
dve
Hacd2
CG10026
tko
l(1)G0469
CG17167
lobo
CG33056
CG33054
CG10512
jumu
Amun
CG14077
CG34375
CG43844
EDTP
tun
aqz
Oatp30B
simj
Smyd4-4
CG3603
bel
Karybeta3
CG31637
Mcm7
CG1607
CG5674
raskol
Tpl94D
CG13055
Egfr
Ubc6
CG13893
CG3032
Pc
Ulp1
CG11131
DPCoAC
CG5180
d
Eip75B
CG10597
Pvr
Rab26
Sox102F
TM4SF
CG12818
Bruce
Zip42C.1
CG43271
CG43407
Klp98A
CheA29a
CG42340
CG3918
SecCl
CG8173
bbg
CG11050
CG2059
CG1677
His1:CG33816
Eglp2
lectin-22C
Su(dx)
CG13707
CG14905
CG4116
ecd
CG11608
Shmt
CG43155
CG3726
MsR1
Gr89a
CG30289
CG13806
Dif
CG5043
dpr3
Tctp
CG6073
CG34130
Cyp6a16
snRNP-U1-C
gukh
agt
DUBAI
nopo
CG5726
mthl9
RpL18A
MESR4
betaCOP
CG8249
CG13135
RpL22
Rtnl1
Not10
tub
Tsp96F
SppL
Actn3
Tmem18
Dyb
CG16964
Pep
CG31626
tau
RpS15
obst-A
Mapmodulin
CG31689
Eglp4
emc
CG5144
Art4
CG15126
egl
CG5273
Acsl
Oda
Crtc
CG11601
Prosap
norpA
Tgi
mRpL33
mRpL1
CG9626
CG13560
RpS9
CG4927
SmD3
Baldspot
Tsp42Ee
Tsp42Ed
SPoCk
Sxl
CG2111
Pits
Sirup
Ten-a
GstE3
CG9902
CG8617
Pu
CG4286
drongo
par-1
CG7675
RpL7
Ripalpha
His2B:CG33868
RpL23A
RpS4
Tm1
bam
Rm62