ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CDX2 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◣ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
FRG2C
HOXB3
HOXB4
DUX4
HOXC5
ZNF76
CDK5RAP3
C20orf204
HOXA3
MTRNR2L1
MALRD1
C1orf100
WDR74
TSPAN3
HSPE1-MOB4
HSPE1
HSPD1
HOXC6
HOXA5
USH1C
DUT
ZNF143
FRG2
OR9Q2
GFOD2
COL23A1
RBBP8NL
CYP2R1
COL5A2
RHOH
HOXB8
MAMDC2
MEP1A
LGALS3
HOXB5
CXCL9
ART3
NEK2
DESI2
WBP4
ELF1
GBF1
SF3B4
MTMR11
AP1M1
CREB3L1
RGMB
RARB
SLC30A10
RIN2
NFKBIZ
TRIM48
EEF1A1
ISX
KRT8
TRIM2
LECT2
CERK
HOXC4
ZNRF3
FGG
CD300LF
LRRC19
SOX2
GUCY2C
PHYHIPL
EPRS1
IGSF23
HK1
INTS9
HMBOX1
CA4
CHI3L1
MEIS1
KIAA2012
PRICKLE1
PRSS41
SPATA46
C1orf226
CDX1
KLF4
CDH17
HES1
HNF4G
PDE6A
UGT1A1
SI
NTF3
TMEM107
FGB
LOC102723996
ICOSLG
HKDC1
TFAP2A
RNASE6
LUC7L3
PDZRN3
ZBTB45
GSTP1
KCNE3
CD244
SLC12A2
POU5F1B
FAM20A
QSOX1
TOMM40L
APOA2
FCAMR
ANKRD40CL
PI3
MTCL1
FBXO31
PMEPA1
PKP2
FHL2
CEACAM16
SLC7A6
SLC20A1
DNAJC25-GNG10
DNAJC25
RAMP1
SLC6A7
KRTAP3-1
NAA20
PIGR
AMACR
GOLIM4
DUSP18
HOXA4
NAPEPLD
CFC1
LAMA3
SLCO2B1
SMIM10L1
PRH1-TAS2R14
PRH1
CCDC200
C2orf88
CDC14A
C3orf52
CLRN3
TMEM45B
TBPL1
TGIF1
LRRC66
SYBU
SLC25A27
CYP39A1
MGAT4A
WWC2
RGS2
ADD3
ZNF608
QSER1
NOS2
HNMT
AP2S1
RAB6D
POU5F1
SPAM1
HAND1
MUC3A
EIF4G3
MAP3K14
RBM39
TMEM141
TSPAN8
SPRED2
KIAA1217
SMG7
GSG1
DEPP1
FLNB
GCNT4
FGFBP1
CAST
PDE4D
REG4
B3GNT6
GSDMB
WNT5A
VIL1
WDR77
ATP5PB
ABHD11
TMEM60
PHTF2
HEPH
GRAMD2B
RNF145
LOC388282
KIFC3
TES
WWC1
STX16
MS4A18
DCUN1D2
RNPEP
DCP1A
ALG10
LRIG3
SEH1L
WASHC1
PLEKHG1
SIRT4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MAIP1
RNF114
COBLL1
STAT3
TDRD1
CCDC186
RPUSD4
FAM118B
UGT2B10
SH3D19
MAVS
LRP2
YAP1
NR6A1
SERPIND1
GSN
RBM25
MYRF
MACC1
GGT1
IQGAP2
VSX1
ZZEF1
CYB5D2
ARHGAP17
PES1
HOXB9
CYTH3
INTS4
ZNF3
CELA3A
ZNF563
ALS2
PRR15L
TBL1X
HACD2
FAM53B
CCDC90B
ZNF226
JMY
DUS4L-BCAP29
DUS4L
COG5
CASP4
TOE1
MUTYH
TFPT
PRPF31
GGH
MICAL2
GEM
KIF16B
KCNIP2
SULT2B1
PTPRF
TUT1
ZC3H15
TNFSF15
SGK3
ABLIM1
RNF43
LNX1
SLC17A4
SEMA3C
FABP1
TMEM69
GPBP1L1
PMF1-BGLAP
PMF1
TBX4
ADGRE5
SPINK1
HEXIM2
STAM2
TMEM87B
SCT
CDHR5
ATF3
ALDH3A2
ROCK2
MARCHF8
SELENON
ANKRD27
RBM47
IFRD1
MIA3
E4F1
UBR2
MAP1LC3B
ACOX2
SEC23A
NXPE1
SLC33A1
ERLIN2
SLC26A2
SLC22A2
USP7
ST6GALNAC4
METTL25
CCDC59
SNTB1
INAVA
HOXC8
TOB1
MYO18B
PPM1L
RAB5B
NXPE2
CXCL2
TMPRSS4
NUF2
TM4SF4
NNAT
EPHX2
BLCAP
MRPS23
TATDN3
NSL1
HESX1
APPL1
SFR1
SMCHD1
FAM107B
TXNRD1
RAB14
TSPAN12
PRDX6
DEPDC7
PIK3C2A
CGGBP1
MATR3
ARHGAP45
TLE3
LMO7
COX19
CDK5RAP1
ADNP
MCTS1
FOXN3
CPS1
CASP5
MBNL2
COX20
ARHGEF12
PDXDC1
ADGRF4
TAOK3
PITX3
CDON
KRTAP4-2
KRTAP4-1
PERCC1
OR10AD1
LRRC59
C3orf85
TMEM54
SOX30
REG1B
CTSK
C5orf52
RGPD2
PPIL3
NIF3L1
CDK11B
CDK11A
UBB
ZHX3
CIDEC
AKAP9
NWD1
ABR
RIC8B
H4C12
FAM72D
FAM72C
DLX4
GBA
NFAT5
MIDEAS
ZNF248
UTP3
MMACHC
INSIG2
PPARG
PSMD3
RBM15
KLHL30
BCL2L1
KRT19
CEP126
ANGPTL5
LIMA1
PAK1
MRPL44
ETFB
YWHAZ
RABEPK
MTRNR2L8
AKR1C3
METTL15
KIF18A
ATL3
IL33
RTN4
RGPD6
ENGASE
UTS2R
TBC1D30
HSP90B1
PRSS3
IGFL4
DLAT
ELAPOR2
SCAF11
RNF31
RNF186
PSME2
NUDCD1
TPD52
MGAM2
PRKCZ
PRKAB2
ZMPSTE24
ACAN
PLAAT2
ARF6
JMJD1C
FAM86B1
PRDM4
BCL10
TARDBP
ATP2B4
ACVR1B
SMC2
C19orf33
ARHGAP27
OIP5
NUSAP1
KHSRP
RFLNA
AMOTL2
TPCN1
CDC14B
CLGN
ANO4
COX16
CALML4
TM7SF3
SGO2
NPIPB4
ARHGDIB
PREPL
CAMKMT
SALL4
RMDN2
MKX
EIF2AK3
COG3
G3BP1
ZNF503
LDHAL6A
ZCCHC8
HNF4A
CTSB
PHF19
HMOX1
GOLGB1
TDP2
NEBL
CRYM
ACOT13
PKIB
GTPBP4
FARSB
THAP1
ALG10B
TNFSF11
NRAS
KRT20
FNBP4
TTI2
STAT1
EBAG9
MPP6
MLF1
ZCCHC14
TMED9
NR5A2
ARHGEF18
HOXA9
HOXA7
RNF7
MED13L
ME3
HMGCS1
PDCD6IP
KNL1
CLIC5
ZNF341
SGCB
H3C15
H3C14
H2AC19
H2AC18
CDCA8
C1orf109
RAD54B
FSBP
WWC3
RGPD1
WDR89
TMEM230
SLC45A4
LRRC31
STK32C
SLC4A9
LRRC27
SLC35B4
AJUBA
ZFP62
TMEM205
CCDC159
NT5DC4
MOB4
REG3A
LDLRAD4
EIF3D
NOSTRIN
FAM135A
CEP120
MRPL21
IGHMBP2
GPATCH1
TMEM170A
SLC12A3
PPP1R3D
NT5C3A
FAM217B
NGB
UGT2B7
THG1L
IL34
ANK3
NR0B2
SPATA2
SLC3A1
PRAG1
CACNA1D
SCAF1
RRAS
NSFL1C
SHF
CNNM3
SH3TC2
RTTN
RAB3C
ZNF721
PIGG
TCF20
PHACTR4
NDE1
MARF1
STX1A
MBIP
IFIT1B
CASC3
AKTIP
DNM2
CPLX2
BCAS1
ADAP1
KMT2D
RAG2
PTPN6
NCOA5
CLDN4
C12orf57
SLC12A7
PDE4DIP
HNRNPH2
GLA
CYTIP
CLOCK
SNX5
SLC51B
RGPD8
RGPD5
MGME1
INHBE
IBTK
CFC1B
MLPH
C3orf38
TRIM15
TRIM10
PPIAL4H
PPIAL4G
LASP1
OSBP
NPIPB13
NPIPB12
VTA1
PCK1
NMBR
INTS5
GNA14
ZNF33B
TMC7
FNIP2
NPIPB3
TMEM126B
DLG2
CAAP1
SRI
VIPAS39
SPOP
POLR2J3
IRF2BP2
AHSA1
SORL1
SNX17
EIF3F
EIF2B4
ZNF91
RNF24
NFE2L2
CELA3B
TINAG
S100A16
BTNL3
ANTXR2
PPIP5K2
BANP
EMP1
ARID5B
CLCN3
EMC9
UNC45B
ENSA
CRLF3
SPRING1
RNFT2
MINDY3
FUT2
CMTM1
TTLL6
PABPN1
PPP1R3A
EHBP1
CBLB
SP2
TAPT1
SLC11A2
FURIN
ZNF552
ZC3H10
TARBP2
RPL41
MAP3K12
ECT2
CDK12
TM2D2
TCN2
SHOX2
RSRC1
ADAM9
SVIL
RAPGEF6
HPGD
ZNF25
NCOA4
LENG9
FBN2
PIH1D1
NSRP1
CNOT1
BRMS1L
ANKRD17
ALDH16A1
SERP2
MME
FAM161B
COQ6
KPNB1
DNAJC27
CCNJL
ZNF577
B4GALT6
DNMBP
ARHGEF38
MED13
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CACHD1
ANXA11
SKA2
PRR11
ICE1
PRPF19
HINT1
G3BP2
GALNT1
EVI5L
FOXJ3
CALR3
C19orf44
ITSN1
CRYZL1
LIPK
GALK1
WDFY1
KREMEN1
CRYBG1
OPRL1
LKAAEAR1
CLIC4
PNPLA8
EHF
CHD2
CAPN2
UCK1
KBTBD8
SMG1
TMED7-TICAM2
TMED7
UBAP2L
C1orf43
UEVLD
PTPRB
MRPS16
CTSV
MADD
DNPEP
ZKSCAN1
DDX59
BCAR3
ZSWIM5
USP6NL
PDZK1
CALM2
USP17L20
LRRC4
ZCWPW2
TCF12
AZI2
FGF1
ETFBKMT
RBIS
ZNF501
FBXO48
CAMK2G
APLF
SF3B5
NOP16
HIGD2A
ACSF2
ADARB1
ZSWIM3
PHF8
CTH
ACOT8
USP17L22
FAM168A
PPME1
C2CD3
PHLDB2
GPR171
SIX1
PLA2G6
NAA60
KLF5
YAE1
SMTN
DIS3
AMN1
TUBG2
TOR1AIP2
STRAP
NMNAT1
LZIC
LGALS4
CTTNBP2NL
BCL9
ZW10
SOWAHC
PTPRR
PIK3AP1
H4C14
CHKA
ADGRG1
SPAAR
RAB5A
NOTCH2
GSDMA
EFHB
ZNF510
HSD17B7
BAHCC1
CDX2
BARX2
ARHGAP24
ZNF384
HHLA2
DHRS3
NPIPB5
KIF26B
FEM1A
DOCK6
CSDE1
SRP9
CD55
CACNB2
TMEM106B
MDP1
CHMP4A
TSHZ1
SHH
ZDHHC5
CCNI
OGFOD2
NHSL1
TEP1
RDH11
CCDC150
TRIB1
MARK2
RAB30
HRH1
ATG9B
ABCB8
MTF2
MRE11
GHITM
ANKRD49
ACCS
MYADM
ID1
STARD3
PPP1R1B
BCAS4
PPM1B
PARP2
APELA
ZNF438
OSBPL1A
PMVK
NUAK2
GAS2L3
PRR5L
EIF4A2
CDCA3
MYH4
KRCC1
USPL1
SRGAP1
HMGB1
FAR1
AURKAIP1
AIG1
SLC38A1
MBTPS2
GOLPH3
BRCA1
ANAPC5
ZBTB26
AFP
STT3A
SNX16
SECISBP2
GLRA2
TUBAL3
CFAP69
BCAP29
TRIQK
PPFIBP2
BCAS3
PPP3CA
NNMT
KLC1
ERGIC2
ATP5F1B
USP30
STAT6
SMG5
NPAS4
LRATD1
ALDH7A1
RCOR3
PHKG2
NAGLU
VPS50
RAB3D
HEPACAM2
GADD45A
UGT1A8
TRMT61B
NME7
MLEC
IL36RN
IL36B
FOXP1
BLZF1
ZNF484
TPX2
TMIGD1
TMED5
RABGEF1
INPP5F
CCDC18
ATP5MC1
SEC23B
DNAJC9
DSC2
UGT8
RP1L1
RASSF10
POLK
HSPA4
COPS7B
CERT1
SUCO
OPA3
IFTAP
CS
WDPCP
OGT
MDH1
STYXL2
MBNL1
GPA33
BATF
PIP4P1
CYP51A1
KDSR
CLDN12
ZBTB3
MON1B
DDX23
ATP5MPL
TMEM87A
TMEM41B
TDGF1
PRSS23
GANC
CHCHD3
ARID4A
RHOBTB2
RBBP5
NRL
GTPBP1
FAM160A2
DCAF11
TBC1D19
OGFOD1
NUDT21
MAPRE3
EGLN1
CRLS1
OR9Q1
MEX3C
ADGB
WASHC3
TOB2
TAPBPL
MIER1
KDM8
DNAI4
C1QTNF1
ZNF337
VOPP1
TMEM53
CSTF1
CALB1
AURKA
ARMH1
SYNE3
SLC14A2
TMEM242
NOS1AP
NFIX
KIFBP
KCTD5
DLD