ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9964512 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◣ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
HOXB3
HOXB4
FRG2C
HOXC5
CDK5RAP3
DUX4
MALRD1
HOXA3
HOXA5
PHYHIPL
ZFP64
COL5A2
HOXB5
GFOD2
C1orf100
TSPAN3
RHOH
USH1C
SI
DUT
FGG
COBLL1
WNT5A
SF3B4
MTMR11
LECT2
MEP1A
OR9Q2
C20orf204
ZNF76
FRG2
NAA20
IGSF23
PRICKLE1
SMIM10L1
PRH1-TAS2R14
PRH1
RARB
LUC7L3
PDZRN3
MPP6
MEIS1
RGMB
WBP4
ELF1
FAM20A
ALDH3A2
GBF1
PITX3
LGALS3
MTCL1
WWC2
PKP2
CFC1
TGIF1
HOXC6
SLC12A2
CAST
LNX1
CDH17
LAMA3
FGB
HAND1
APELA
CA4
SALL4
RIN2
SLC30A10
NTF3
CYTH3
HOXB8
CYP2R1
PI3
ZNF143
KREMEN1
CACNA1D
CXCL9
ART3
HOXC4
ZNRF3
ARHGEF16
SLC7A6
TM7SF3
TRIM2
RAMP1
SYBU
NFKBIZ
PPM1L
SEH1L
TLE3
MGAT4A
AMACR
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HEXIM2
COL23A1
ARF6
MS4A18
TMED9
MYNN
ACTRT3
B3GNT6
PDE4D
SMCHD1
ALS2
HNRNPH2
GLA
HK1
GSTP1
LRRC66
RMDN2
ERBIN
NAPEPLD
CDON
HSPE1-MOB4
HSPE1
HSPD1
LOC388282
KIFC3
GGT1
HNMT
SLC26A2
CDX1
HOXB9
KCNIP2
ZFX
G6PC2
ANKRD30BL
UGT8
NR6A1
TRAM1
CEACAM16
KRTAP3-1
STK32C
LRRC27
PLEKHG1
C1GALT1
CHI3L1
SLCO2B1
TMEM141
VIL1
TMEM45B
RNASE6
GOLIM4
SELENON
QSER1
SULT1C4
REEP1
IL36RN
IL36B
ADD3
PHLDB2
NEK2
UGT1A1
RBBP8NL
ZNF608
ZC3H15
ISX
TMCC1
STAM2
SPATA46
C1orf226
HSD17B7
PTP4A1
XYLT1
XXYLT1
CCDC198
UGT2B7
EIF2S3B
AIG1
COX19
CCDC200
CD244
KRAS
KIAA2012
MED13L
DESI2
CD300LF
HOXC8
PDE6A
PSMA1
PDE3B
MPPE1
DEPDC7
TAOK3
INHBE
AP1M1
FABP1
KSR1
OAT
TP53BP1
PRSS41
DCUN1D2
TRMT61A
CKB
TSPAN12
ZCWPW2
AZI2
NDUFB4
CLRN3
REG4
SHOX2
RSRC1
BTNL2
RNF145
NXPE1
USP17L20
USP17L21
USP17L18
USP17L12
USP17L11
PDXDC1
LRRC19
PIGR
PKIB
CSTF2T
CITED2
PARD6B
MICU1
NCOA1
HINT1
HES1
ARHGAP10
EPB41L3
GSDMB
GRAMD2B
USP17L22
SLC51B
AFP
MYRFL
SPINK1
PRDX6
MAPKAPK2
JMY
TTLL6
GAS2
YBX1
TBC1D30
ARID5B
TMEM267
INSIG2
PDZK1
CFHR5
B3GNTL1
HHEX
DLX4
SLC22A2
NR5A2
HSPH1
SUSD6
SRGAP1
ATP13A4
TSPAN8
KRCC1
LETM1
ENTPD7
C2orf72
C3orf52
FAM234B
PPIAL4H
PPIAL4G
TOE1
MUTYH
OR10AD1
IFIT1B
ACSF2
SHLD2
GLUD1
PTGR1
OR13G1
FNIP2
COG3
KIAA1217
CES5A
IGLL5
MAVS
DKK1
ARL1
CRYGC
CFAP44
EPRS1
HNF4G
USP17L15
FJX1
EPHX2
EHF
AKAP9
ZNF311
NFX1
SLC20A1
KRT19
HOXD1
ANKRD36C
FOXD4L4
ARHGEF38
KDM8
MTRNR2L1
WDR74
MAMDC2
CREB3L1
TRIM48
EEF1A1
KRT8
CERK
SOX2
GUCY2C
INTS9
HMBOX1
KLF4
TMEM107
LOC102723996
ICOSLG
HKDC1
TFAP2A
ZBTB45
KCNE3
POU5F1B
QSOX1
TOMM40L
APOA2
FCAMR
ANKRD40CL
FBXO31
PMEPA1
FHL2
DNAJC25-GNG10
DNAJC25
SLC6A7
DUSP18
HOXA4
C2orf88
CDC14A
TBPL1
SLC25A27
CYP39A1
RGS2
NOS2
AP2S1
RAB6D
POU5F1
SPAM1
MUC3A
EIF4G3
MAP3K14
RBM39
SPRED2
SMG7
GSG1
DEPP1
FLNB
GCNT4
FGFBP1
WDR77
ATP5PB
ABHD11
TMEM60
PHTF2
HEPH
TES
WWC1
STX16
RNPEP
DCP1A
ALG10
LRIG3
WASHC1
SIRT4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MAIP1
RNF114
STAT3
TDRD1
CCDC186
RPUSD4
FAM118B
UGT2B10
SH3D19
LRP2
YAP1
SERPIND1
GSN
RBM25
MYRF
MACC1
IQGAP2
VSX1
ZZEF1
CYB5D2
ARHGAP17
PES1
INTS4
ZNF3
CELA3A
ZNF563
PRR15L
TBL1X
HACD2
FAM53B
CCDC90B
ZNF226
DUS4L-BCAP29
DUS4L
COG5
CASP4
TFPT
PRPF31
GGH
MICAL2
GEM
KIF16B
SULT2B1
PTPRF
TUT1
TNFSF15
SGK3
ABLIM1
RNF43
SLC17A4
SEMA3C
TMEM69
GPBP1L1
PMF1-BGLAP
PMF1
TBX4
ADGRE5
TMEM87B
SCT
CDHR5
ATF3
ROCK2
MARCHF8
ANKRD27
RBM47
IFRD1
MIA3
E4F1
UBR2
MAP1LC3B
ACOX2
SEC23A
SLC33A1
ERLIN2
USP7
ST6GALNAC4
METTL25
CCDC59
SNTB1
INAVA
TOB1
MYO18B
RAB5B
NXPE2
CXCL2
TMPRSS4
NUF2
TM4SF4
NNAT
BLCAP
MRPS23
TATDN3
NSL1
HESX1
APPL1
SFR1
FAM107B
TXNRD1
RAB14
PIK3C2A
CGGBP1
MATR3
ARHGAP45
LMO7
CDK5RAP1
ADNP
MCTS1
FOXN3
CPS1
CASP5
MBNL2
COX20
ARHGEF12
ADGRF4
KRTAP4-2
KRTAP4-1
PERCC1
LRRC59
C3orf85
TMEM54
SOX30
REG1B
CTSK
C5orf52
RGPD2
PPIL3
NIF3L1
CDK11B
CDK11A
UBB
ZHX3
CIDEC
NWD1
ABR
RIC8B
H4C12
FAM72D
FAM72C
GBA
NFAT5
MIDEAS
ZNF248
UTP3
MMACHC
PPARG
PSMD3
RBM15
KLHL30
BCL2L1
CEP126
ANGPTL5
LIMA1
PAK1
MRPL44
ETFB
YWHAZ
RABEPK
MTRNR2L8
AKR1C3
METTL15
KIF18A
ATL3
IL33
RTN4
RGPD6
ENGASE
UTS2R
HSP90B1
PRSS3
IGFL4
DLAT
ELAPOR2
SCAF11
RNF31
RNF186
PSME2
NUDCD1
TPD52
MGAM2
PRKCZ
PRKAB2
ZMPSTE24
ACAN
PLAAT2
JMJD1C
FAM86B1
PRDM4
BCL10
TARDBP
ATP2B4
ACVR1B
SMC2
C19orf33
ARHGAP27
OIP5
NUSAP1
KHSRP
RFLNA
AMOTL2
TPCN1
CDC14B
CLGN
ANO4
COX16
CALML4
SGO2
NPIPB4
ARHGDIB
PREPL
CAMKMT
MKX
EIF2AK3
G3BP1
ZNF503
LDHAL6A
ZCCHC8
HNF4A
CTSB
PHF19
HMOX1
GOLGB1
TDP2
NEBL
CRYM
ACOT13
GTPBP4
FARSB
THAP1
ALG10B
TNFSF11
NRAS
KRT20
FNBP4
TTI2
STAT1
EBAG9
MLF1
ZCCHC14
ARHGEF18
HOXA9
HOXA7
RNF7
ME3
HMGCS1
PDCD6IP
KNL1
CLIC5
ZNF341
SGCB
H3C15
H3C14
H2AC19
H2AC18
CDCA8
C1orf109
RAD54B
FSBP
WWC3
RGPD1
WDR89
TMEM230
SLC45A4
LRRC31
SLC4A9
SLC35B4
AJUBA
ZFP62
TMEM205
CCDC159
NT5DC4
MOB4
REG3A
LDLRAD4
EIF3D
NOSTRIN
FAM135A
CEP120
MRPL21
IGHMBP2
GPATCH1
TMEM170A
SLC12A3
PPP1R3D
NT5C3A
FAM217B
NGB
THG1L
IL34
ANK3
NR0B2
SPATA2
SLC3A1
PRAG1
SCAF1
RRAS
NSFL1C
SHF
CNNM3
SH3TC2
RTTN
RAB3C
ZNF721
PIGG
TCF20
PHACTR4
NDE1
MARF1
STX1A
MBIP
CASC3
AKTIP
DNM2
CPLX2
BCAS1
ADAP1
KMT2D
RAG2
PTPN6
NCOA5
CLDN4
C12orf57
SLC12A7
PDE4DIP
CYTIP
CLOCK
SNX5
RGPD8
RGPD5
MGME1
IBTK
CFC1B
MLPH
C3orf38
TRIM15
TRIM10
LASP1
OSBP
NPIPB13
NPIPB12
VTA1
PCK1
NMBR
INTS5
GNA14
ZNF33B
TMC7
NPIPB3
TMEM126B
DLG2
CAAP1
SRI
VIPAS39
SPOP
POLR2J3
IRF2BP2
AHSA1
SORL1
SNX17
EIF3F
EIF2B4
ZNF91
RNF24
NFE2L2
CELA3B
TINAG
S100A16
BTNL3
ANTXR2
PPIP5K2
BANP
EMP1
CLCN3
EMC9
UNC45B
ENSA
CRLF3
SPRING1
RNFT2
MINDY3
FUT2
CMTM1
PABPN1
PPP1R3A
EHBP1
CBLB
SP2
TAPT1
SLC11A2
FURIN
ZNF552
ZC3H10
TARBP2
RPL41
MAP3K12
ECT2
CDK12
TM2D2
TCN2
ADAM9
SVIL
RAPGEF6
HPGD
ZNF25
NCOA4
LENG9
FBN2
PIH1D1
NSRP1
CNOT1
BRMS1L
ANKRD17
ALDH16A1
SERP2
MME
FAM161B
COQ6
KPNB1
DNAJC27
CCNJL
ZNF577
B4GALT6
DNMBP
MED13
CACHD1
ANXA11
SKA2
PRR11
ICE1
PRPF19
G3BP2
GALNT1
EVI5L
FOXJ3
CALR3
C19orf44
ITSN1
CRYZL1
LIPK
GALK1
WDFY1
CRYBG1
OPRL1
LKAAEAR1
CLIC4
PNPLA8
CHD2
CAPN2
UCK1
KBTBD8
SMG1
TMED7-TICAM2
TMED7
UBAP2L
C1orf43
UEVLD
PTPRB
MRPS16
CTSV
MADD
DNPEP
ZKSCAN1
DDX59
BCAR3
ZSWIM5
USP6NL
CALM2
LRRC4
TCF12
FGF1
ETFBKMT
RBIS
ZNF501
FBXO48
CAMK2G
APLF
SF3B5
NOP16
HIGD2A
ADARB1
ZSWIM3
PHF8
CTH
ACOT8
FAM168A
PPME1
C2CD3
GPR171
SIX1
PLA2G6
NAA60
KLF5
YAE1
SMTN
DIS3
AMN1
TUBG2
TOR1AIP2
STRAP
NMNAT1
LZIC
LGALS4
CTTNBP2NL
BCL9
ZW10
SOWAHC
PTPRR
PIK3AP1
H4C14
CHKA
ADGRG1
SPAAR
RAB5A
NOTCH2
GSDMA
EFHB
ZNF510
BAHCC1
CDX2
BARX2
ARHGAP24
ZNF384
HHLA2
DHRS3
NPIPB5
KIF26B
FEM1A
DOCK6
CSDE1
SRP9
CD55
CACNB2
TMEM106B
MDP1
CHMP4A
TSHZ1
SHH
ZDHHC5
CCNI
OGFOD2
NHSL1
TEP1
RDH11
CCDC150
TRIB1
MARK2
RAB30
HRH1
ATG9B
ABCB8
MTF2
MRE11
GHITM
ANKRD49
ACCS
MYADM
ID1
STARD3
PPP1R1B
BCAS4
PPM1B
PARP2
ZNF438
OSBPL1A
PMVK
NUAK2
GAS2L3
PRR5L
EIF4A2
CDCA3
MYH4
USPL1
HMGB1
FAR1
AURKAIP1
SLC38A1
MBTPS2
GOLPH3
BRCA1
ANAPC5
ZBTB26
STT3A
SNX16
SECISBP2
GLRA2
TUBAL3
CFAP69
BCAP29
TRIQK
PPFIBP2
BCAS3
PPP3CA
NNMT
KLC1
ERGIC2
ATP5F1B
USP30
STAT6
SMG5
NPAS4
LRATD1
ALDH7A1
RCOR3
PHKG2
NAGLU
VPS50
RAB3D
HEPACAM2
GADD45A
UGT1A8
TRMT61B
NME7
MLEC
FOXP1
BLZF1
ZNF484
TPX2
TMIGD1
TMED5
RABGEF1
INPP5F
CCDC18
ATP5MC1