ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX096354 | LS-180
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◣ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

WDR74
HOXB3
HOXB4
DUT
C20orf204
CXCL9
ART3
LRRC19
TFAP2A
NFKBIZ
HOXB8
CERK
SLC30A10
HOXA3
HOXA5
AP1M1
C1orf100
FCAMR
DESI2
CDK5RAP3
HOXC5
INTS9
HMBOX1
FHL2
KIAA1217
WASHC1
HNF4G
TMEM107
FLNB
OR9Q2
HOXA4
QSOX1
WDR77
ATP5PB
USH1C
RHOH
REG4
QSER1
IQGAP2
HOXC6
AP2S1
FGFBP1
VSX1
HOXC4
MAMDC2
UGT1A1
TBPL1
PDE6A
CDC14A
TSPAN3
LGALS3
ZZEF1
CYB5D2
LOC102723996
ICOSLG
UGT2B10
GUCY2C
MAVS
CREB3L1
SLC17A4
HESX1
APPL1
PRKCZ
KIAA2012
SLC25A27
CYP39A1
SPAM1
TRIM2
RPUSD4
FAM118B
WBP4
ELF1
SGCB
TMEM87B
MGAM2
KLHL30
MATR3
SPATA46
C1orf226
NWD1
NPIPB4
ROCK2
ACAN
CLRN3
SPRED2
CDK11B
CDK11A
CDH17
PDE4D
SEMA3C
RNASE6
RAB6D
CELA3A
LRRC66
MEP1A
CASP5
ZBTB45
CYP3A4
ZNF608
ZNRF3
USP7
REG1B
C3orf52
C3orf85
TSPAN8
SLC4A9
ARHGAP17
GEM
TARDBP
RAD54B
FSBP
RGMB
GOLIM4
KRT8
TMEM54
NXPE2
ABLIM1
PIGR
RNF186
SLC6A7
ADGRF4
CEACAM16
MYO18B
ZNF563
NPIPB3
TBL1X
AKR1C3
CMTM1
YAP1
NOS2
MINDY3
UTS2R
PLAAT2
NEBL
IGFL4
DUS4L-BCAP29
DUS4L
COG5
PRSS3
JMY
LRRC31
HHLA2
NPIPB13
NPIPB12
TAPT1
ARHGAP45
MBNL2
ANO4
IL33
RNF145
RNF114
FBXO31
TMEM45B
CALB1
ZSWIM5
CDX1
MCTS1
GNA14
GBF1
SGK3
LDLRAD4
LENG9
MADD
RAMP1
PRSS41
MAP3K14
RGS2
PHF19
ERLIN2
DNAJC25-GNG10
DNAJC25
MAB21L4
BCL10
DCUN1D2
ACVR1B
HOXA9
HOXA7
GJB4
KIF16B
MLF1
ZCCHC14
TNFSF11
TM4SF4
HEPH
ADD3
UTP3
PRR5L
RABEPK
HSP90B1
TJP2
TES
ADGB
DSC2
EIF4G3
ZKSCAN1
PIK3CA
PRDM4
SLC3A1
ENGASE
MS4A18
SIRT4
MIA3
MALRD1
SH3D19
MUC20
SMG7
GALK1
NAPEPLD
LAMA3
CALML4
NSRP1
PRDX6
PTPRF
CELA3B
MED13
NPL
EPRS1
TAOK3
NNAT
BLCAP
GALNT1
INAVA
VOPP1
PES1
SEC23A
BTNL3
TCN2
C2orf88
LIMA1
TPD52
CRYM
HPGD
MTRNR2L2
MSH3
DHFR
RP1L1
SERPIND1
PTPRR
PRR15L
SLC11A2
DCP1A
COX20
MEIS1
GPRIN3
ACOX2
RTN4
TBC1D30
KRT20
PTPRB
CASP4
SLC12A7
WASHC3
SLC26A2
CIDEC
UCK1
TRIM48
H3C15
H3C14
H2AC19
H2AC18
LOC388282
KIFC3
TDRD1
CCDC186
PDCD6IP
CYTIP
KIF26B
GSDMB
RBM25
COX16
HNMT
RGPD6
RGPD8
RGPD5
MAPRE3
VANGL1
CBLB
CORO1A
RHCG
LGALS4
HKDC1
FNBP4
TSHZ1
MTCL1
NPIPB5
STYXL2
GPA33
CDCA7
KIAA1549L
GSN
RAB14
RNF24
UGT1A8
CNBP
EIF2AK2
B4GALT6
MMP10
NEURL1B
SCAF11
C4orf36
ZNF3
CDCA8
C1orf109
FABP1
ADGRE5
CFAP45
APBB2
UNC45B
SLC25A45
FRMD8
HEXIM2
KLC1
GCNT4
ETFBKMT
STARD3
PPP1R1B
C1QTNF1
SYTL2
GSG1
FBXO32
TMEM114
ZBTB7C
RABGGTB
SOCS6
TSPAN12
EBAG9
NGB
LRRC10B
SIT1
MBP
IQCF1
DEPP1
CLOCK
ZNF282
LNX1
ST6GALNAC4
ADGRG1
CTXN3
RASSF8
SH3TC2
SLC20A1
PPARG
TUBG2
DLG1
CGGBP1
PTPN6
C12orf57
C3orf38
MAP3K13
ARHGAP39
NDE1
MARF1
SRI
TAF4
SMC2
ECT2
ANKRD40CL
PPIL3
NIF3L1
UGT2B17
GGH
ABR
TM2D2
ADAM9
UEVLD
CBFA2T2
ATP2B4
CLIC4
PYGB
PPARGC1A
MMP1
CRYBG1
PIWIL1
PRKAB2
FBXO48
APLF
BARX2
TDGF1
ITGA2
ELAPOR2
PMVK
MUC13
TNIK
PMEPA1
ACSF2
RUBCNL
ARHGAP32
WWC1
C19orf33
MYH4
WEE2
DENND11
SGO2
RAPGEF6
SULT1C2
ABAT
SLC12A2
NXPE1
CPLX2
VWA2
LRRC61
FAM114A1
YWHAZ
CCNJL
GGT6
CYTH1
FERMT1
CXCL2
MTHFD1L
EIF3E
PKP2
ARHGAP27
NSFL1C
TEP1
NOS1AP
DIAPH3
DUSP18
HACD2
ZNF91
FRMD3
NEURL3
TMEM205
CCDC159
RAB3D
TM9SF3
LRRN3
EPHX2
ZMPSTE24
PRAG1
PPP1R3A
CTTNBP2NL
TNFSF15
ANXA11
MYO7B
NUMA1
LRTOMT
RNF103
TXNRD1
ETFB
TRIB1
CPSF4L
ANTXR2
KLF5
SUSD1
AMACR
IRF2BP2
ARHGEF38
PLA2G6
NOTCH1
ATL2
FOXN3
HINT1
ICA1
OR10H1
RNF31
PSME2
EMC9
FBN2
HOXA6
SPO11
RUNDC1
PTGES3L-AARSD1
PTGES3L
LASP1
RASGRF2
AGFG1
VPS52
RPS18
OIP5
NUSAP1
NR0B2
HEPHL1
KCNQ1
H4C12
FAM135A
TMEM170A
IBTK
AHNAK2
SPATA2
PHF8
SHH
PPIL1
C6orf89
USP54
PLEKHG1
SMCHD1
RGS8
CYP3A5
LPIN1
CACHD1
SLC14A2
UBE2J1
MYRF
BATF
TIPIN
LTB4R2
LTB4R
CIDEB
NCAPD2
MRPL51
BTBD3
PIF1
TTI2
MTUS1
GSKIP
ATG2B
TPM4
WWC3
OR9Q1
TCIM
CXCL8
C6orf132
LRIG3
ZNF226
FARSB
USP6NL
ARL14
MRO
TRMT112
PRDX5
IL20RB
LRP1
KRT36
SLC22A2
SOX30
C5orf52
PHACTR4
MLPH
SORL1
SMG1
SMIM14
DUX4
TGIF1
CPS1
ARHGDIB
HOOK1
SYF2
EPHA6
CLGN
MBIP
GSDMA
DUSP6
SH3BP4
PADI3
RPL23
ANKRD27
FOXJ3
ZNF484
KLRC2
INSIG2
DNMBP
MYADM
RFLNA
BAHCC1
BCAP29
GADD45A
RPS6KA1
MBD2
TNFRSF10A
FHL1
PHKG2
SVIL
CAMK2G
SDF4
B3GALT6
EBPL
CALCA
TMPRSS4
ZNF552
PIK3R2
N6AMT1
CRLF3
FGF1
LRATD1
YARS2
ME1
UHRF1
XDH
HNF1A
VWA5A
KPNA6
ME3
ZNF587
POLR2J3
SERP2
FOXP1
ARHGEF28
MTFP1
CCDC114
MACC1
SPINK1
EIF3F
FDPS
ASAP2
ANXA10
AGPAT3
CEP126
ANGPTL5
GNAL
TOE1
MUTYH
CLCN3
SMIM31
GDPD3
CD44
TFPT
PRPF31
DEPDC7
SULT1A2
PDE5A
CADPS
RBM47
PPFIBP2
MELTF
POLG
ZNF761
TOM1L1
HSD3B1
HS3ST1
HNF4A
IL34
ACCS
NPSR1
SLC7A6
IFRD1
SFR1
ZNF248
ARF6
EHF
PER2
GRK2
KRCC1
CDHR1
SEPTIN9
OR52K1
TMEM141
FAM53B
NFIX
STPG1
NIPAL3
KRT6B
PLEKHS1
UBE2E1
FAM13B
KCNK1
HOPX
TEX9
RFX7
DNAJB3
TMEM69
GPBP1L1
FAM107B
ANKRD28
ALDH3A1
A1CF
E4F1
STK19
DXO
ETHE1
RFX3
REXO4
ADAMTS13
OR51E1
PBOV1
TMCC3
SLC28A2
TPCN1
IFIT1B
FUT4
DGKD
CYP4X1
SSBP3
SARS1
GNPDA1
ABCC10
LOC100509620
NINJ2
KLHL41
GALNT12
RIN2
SYBU
RIC8B
NUAK2
SYNE3
RAPGEFL1
AHCYL2
SHROOM3
FAM214A
GFOD2
MAP1LC3B
METTL25
CCDC59
MME
GSPT1
NCOA4
ICE1
DNPEP
CDX2
ANO1
ADGRF2
LRRC4
NAA60
KDSR
EGLN1
FRA10AC1
ILF2
AP1S3
C1orf141
ALOXE3
KLHDC8A
TRIM27
NUDT3
EIF4EBP1
ACY3
ABHD11
ZNF510
CSDE1
RHOBTB2
RIPPLY1
NR6A1
TMEM87A
GANC
H3C10
H2BC14
H2AC14
SCT
CDHR5
U2SURP
ZFAND6
DENR
MSH5
CLIC1
STX19
ABCB9
ARPIN-AP3S2
ARPIN
CEP120
RDH11
OSBPL1A
FAR1
LEKR1
GALNT8
TTC5
ATF3
CDC14B
GTF2IRD1
PNLIPRP1
TNFRSF1A
MED15
BCL2L14
ZNF721
PIGG
DDX41
SLC5A1
ARID1A
EPB41L2
SPOCK2
KRT39
GDPD4
HES1
MTRNR2L8
TMED7-TICAM2
TMED7
RABGEF1
MBNL1
COX7A2L
VPS37D
DENND1B
SCRN1
GGT1
CLIC5
EIF3D
RNF217
CAPN15
ZNF395
ZNF281
SLC38A1
RASAL2
HSBP1L1
PAM
CBLIF
KIAA0319
SLC26A7
MTIF3
CSGALNACT1
FGD3
ETV6
SH3BGRL2
UGT1A10
PWP1
UBR2
PDXDC1
BRCA1
ELP3
TFDP2
CXCL11
KLHL29
SPPL2B
LSM7
SF3B4
MTMR11
TM7SF3
RTTN
TRIM15
TRIM10
DOCK6
ALG14
LRP10
RNF39
ZNF789
CDKN2AIP
SP100
FEZ2
CEMIP
SI
AMOTL2
SMG5
MYL6B
CASD1
FAM193B
ERGIC1
TMEM79
DPEP1
TMEM221
ALG10
PTCD3
POLR1A
CLIP2
ADGRL1
TMC5
TMEM125
NFIB
SLC10A7
GRM4
TCF12
YAE1
MRPL19
GALK2
COPS2
ENKUR
MAPRE2
NIBAN2
HRH1
ABCB11
ZNF350
ZSWIM3
ACOT8
ZNF438
ATG4C
METRNL
PRELID2
KCTD3
ARID3B
KDM4B
INTS4
NDUFV3
CLSTN1
GABARAPL1
PKM
NOX3
MAP3K4
ART1
WWP2
LSAMP
ZC3H15
SLC33A1
GPATCH1
ARID5B
TAPBPL
IGF2BP3
PRDM2
PEDS1-UBE2V1
PEDS1
DDAH1
C6orf136
GRAMD2B
KRT19
METTL15
KIF18A
ZC3H10
RPL41
CHD2
GAS2L3
GLRA2
TMEM171
FAM234B
KRT14
ECHDC1
CSK
BCAS1
AMN1
C9orf72
PLA2G2A
PHGR1
ADM
ZNF326
TMEM94
SCP2
MDM4
KDM5C
NRAS
RAB30
WEE1
TMEM139
CASP2
PELATON
PSMD3
KHSRP
NFE2L2
B3GNT3
ALDH1B1
RIPK4
MRPS15
CCAR2
IER3
STX3
TMEM207
CRY1
SEMA4B
KDELR2
NT5C3A
CAAP1
DLL3
TMEM144
ZNF764
CASP8
TM4SF1
SYTL5
SATB2
POGZ
PCDH15
MYH14
IP6K3
GIMAP5
TINAG
ATP13A4
FABP2
ANXA2
SH2D6
SIDT1
TMEM259
CNN2
TMBIM1
CLIP4
SULT2B1
PIK3C2A
MARK2
RELL1
NEK3
MTMR4
CASP7
CGRRF1
ACP3
PTBP3
WSB2
GSTK1
ECSIT
CTSB
ZNF384
ATP5MPL
ZBTB38
SYS1
RETNLB
RNF216
GLI4
LCMT1
UGT1A5
TDRD9
SPTBN1
SHF
PIH1D1
ALDH16A1
ATP5F1B
H4C11
OAF
HEXIM1
TMEM247
SERPINA1
ASPH
TOMM7
MYRFL
H3C8
H2BC10
SNRNP48
RIMBP2
MFSD12
LAMC2
JAGN1
RBM15
HMGCS1
PDE4A
AFF3
EPHA2
BCAR3
TMIGD1
DKK1
GMDS
MEF2C
CPVL
CHN2