ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: MSX2 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◣ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

DUX4
PALM2AKAP2
WDR74
STX5
RBL2
STK32C
LRRC27
PSG5
MAMDC2
PSG9
ARHGAP5
ARL4D
PLA2G4D
SNX32
FRG2C
CDADC1
SMARCC2
PSG1
MKLN1
MTRNR2L8
NDST1
PSG11
ALOX5AP
SLC5A10
BACH2
EAPP
SLC6A4
CCDC200
SEC22B
MESP2
TNFRSF19
LOC102724770
DGCR6
EXOSC2
WWP1
NEDD9
RNF43
NIPSNAP1
DOT1L
AP3D1
WDR93
PEX11A
GTF2A2
PSG7
PARP16
MTRNR2L1
HSD17B4
MTRNR2L2
MSH3
LYN
DHFR
ADAM17
SIRT4
PSG8
PSG3
YTHDF1
HEG1
CCDC141
SPNS2
RAB17
ZDHHC1
TMEM52B
OLR1
ITGAM
CDH1
ART1
SIX2
COL23A1
SERBP1
EPS15L1
SRGAP2
ETV3
PPP1R14D
TXNRD1
SLBP
FABP7
MTDH
LRP2
ANKRD23
PSG4
BCL2L13
ATP6V1E1
CRPPA
MYOCD
YWHAE
GTPBP4
TFF1
TAGLN2
FAM110A
ATP2B1
MYEOV
DPEP2
IFNAR1
SLC25A44
KRTAP2-2
KRTAP2-1
KRTAP1-1
ID1
LYRM1
HCAR3
HCAR2
DCUN1D3
C9
PIWIL3
RABGGTB
C1QTNF6
SNRPE
KIAA1191
SH3BP4
TMTC2
OR10V1
MTERF4
MIS12
DERL2
SLC10A6
KRTAP3-2
KRTAP3-1
ENTPD1
TMCC1
NAGLU
HROB
HDAC5
PATJ
PSPN
ALKBH7
CENPX
SOX9
C18orf21
SLCO2A1
ANKRD40CL
GSTO1
ADGRG3
EBAG9
FKBP1A
TRUB1
TPD52
RYK
FRG2
SGK3
ENPEP
COLEC12
SLC7A4
TMEM107
FRY
PDE4DIP
DNAJC15
MS4A2
PKIB
KRT1
CAMSAP3
RASA2
ADAM10
ADH4
BACE1
NR4A1
PHLDB2
SEC23A
GEMIN2
ALG10B
AMN1
POLD4
ANKRD1
SEMA6A
GALNT11
LTBP2
TAS2R41
PTK2B
NCOA3
TMEM270
CCDC81
IRAG1
PISD
MAPK10
COMMD8
ALPP
CDK19
AMD1
SDC1
ABLIM1
SLC7A6
CHI3L2
KIF5C
HEXB
MEST
SFXN5
LNX1
EFNA1
TMEM141
SLN
ZNF444
UPK1A
RARS1
LATS2
IRF8
TAF12
ZNF740
CSAD
METTL27
RNF126
FSTL3
USP6NL
PLEKHM3
CDC42SE2
PRR5
ZNF341
PXMP4
TMED10
SLC7A2
GPRC5A
IKZF3
ARHGEF18
UBE4B
FXYD5
LOC105378979
ASAH1
RXRA
SLC19A3
LIMS4
OSBP
UBE2J1
GCM1
CFAP45
FDFT1
ALS2
QPCT
EHF
BAMBI
RSAD2
HECTD1
PRKCZ
DLG2
DPRX
LIMS1
KRT8
SH3YL1
ACP1
IL10RB
PCOLCE2
IL1R1
FAM89A
SLC45A4
TXNDC2
SYBU
OLFML1
PRKRIP1
SLMAP
TSPAN10
NPLOC4
CD55
FOCAD
TCF15
EID2B
EID2
ACSS1
SLC7A7
MRPL52
SLC2A8
GLIS3
UBXN11
METTL21A
ID3
TRMT9B
SLC30A1
FGD3
PHRF1
DNMT1
NTAN1
HNRNPA0
SLC18A1
PTBP3
CXADR
ZNF474
TRPM6
FAM151B
SH2D4A
ANO6
PET117
KAT14
KRT19
VPS37C
MRPS23
FBXW8
TLK1
MIDEAS
ZNF331
ATP6AP2
ZNF175
UHRF1BP1L
SMIM15
TGFBR1
RLBP1
IL34
SEC11A
TMEM88B
TMEM245
KMT2E
ANKRD65
PTPN1
ZNF362
SPG7
ZNF749
FGD4
PTTG1IP
EIF2AK4
TTC23L
CCSAP
TNS3
BCAS4
ELF5
CTPS1
TAF6
CNPY4
ZNF592
NCBP3
TBX2
PSG2
TMEM212
GINS1
CHST6
ABHD12
CCR5
CLTC
ZNF503
IFNL2
AMOTL1
SLC15A2
FZD6
ZNF343
PACSIN2
XBP1
LSM14A
NIBAN2
FOS
ZNF407
SAA1
ACVR1
ARHGEF10L
EYA3
ODAM
ITGA2
ACER3
H2BC5
H1-4
TACC1
LDLR
SLC44A1
MCCC2
HMOX1
CLCN4
TMPPE
GLB1
NME4
LETMD1
DECR2
KIT
KRT71
BRIP1
UTRN
NKX2-3
KLHL5
KCTD7
PARD6B
CXCL2
BABAM1
PLAAT5
SIK3
CHMP5
BAG1
STARD8
BAHCC1
ZNF367
TIPIN
GSTA4
HSPA2
H3C3
H1-2
PKP2
RGPD2
RGPD1
LGR5
C6orf163
TIAM1
TET1
ERP27
CALML5
FEM1B
APOL6
SIX1
ZNF398
SLC20A2
WBP1L
P2RX6
MAB21L4
CROCC2
LHX8
ITLN2
POU5F1
DOCK5
INSL4
SETD4
MARVELD3
CBR1
CLDN10
ZNF641
RALBP1
NAV2
SLC4A11
RBM15
PFDN4
MB21D2
HACD2
LGALS4
SLC7A9
AFF4
FNBP1L
FBL
ATP13A2
MGARP
SPOPL
BCAR1
ADGRF4
JADE1
NDUFB5
MRPL47
CHN2
ZNF22
NOB1
SAMD7
POLG2
PCDH15
DDX5
CEP95
SLC22A5
EHD4
CCNL1
PPFIBP2
FAM102B
PLAC8
DENND1C
CRB3
NSD3
LETM2
GABRR3
ROPN1L
CORO1C
AZIN1
MESP1
KRAS
DNAJC21
RBFOX2
TULP1
TRAM2
C6orf132
BCAS1
PIK3C2A
RGL1
MUC3A
ARPC5
VIT
AFF1
MTRNR2L9
DHCR24
CLPSL2
ASB2
GIPC1
FOXN4
BMP10
UBL3
SHISAL2B
DGKD
GPR78
SLC6A2
CENPS-CORT
CENPS
BCAS3
ADGRF5
MED15
ACOT6
GREB1
BAZ1B
NPAS4
RHOH
TSHB
PHTF2
MRPL23
MRTFB
IQGAP2
CITED4
BMP7
TTLL7
TRPM1
PHF6
CMTR2
UCMA
POLR2J3
NBEA
LIFR
STS
SLC6A9
BIN1
TEX46
TRA2B
APBB1IP
MIGA1
ZNF106
SYNPO
SNAP23
LCMT1
TMPRSS2
BZW2
RRS1
PRPS1L1
ADHFE1
RTN4
ACOT2
CFAP92
C1GALT1
NPEPPS
IBTK
ASB15
SLC7A8
LTA4H
PTPN6
DEFB130B
DEFB130A
C12orf57
ATXN7
SULT1A4
SULT1A3
LSMEM1
TBC1D12
GNGT1
GNG11
EVPLL
ASPSCR1
CLIC4
CDS1
IFFO2
SLC12A3
ITGB6
HPDL
SENP5
RHOQ
CST4
ATP6V1E2
RASSF2
TCN1
RIPOR2
C1orf159
FREM2
SNX27
USO1
PALLD
OSBPL2
KIFAP3
ITM2C
ZBED1
RIPOR1
MYCN
DHRSX
SNX31
RNF114
LOC389199
IL1F10
CYLC1
CCDC153
CBL
ANKUB1
AFAP1
CPNE8
SEH1L
ACER2
KPNA3
TET3
SRI
SPOUT1
KYAT1
TRIM17
H3-4
TRIM33
MYO6
EGLN3
DHX35
PMF1-BGLAP
PMF1
ZNF853
RGS22
CMTM3
CD46
CTNNAL1
SLC1A5
DUSP21
TSTD1
ART4
NBR1
H4C9
CRISP3
SPIDR
RAB44
TMEM82
SLC25A34
TACC2
VOPP1
FGF1
TFE3
SLC22A6
KDM5C
GJA10
SPTLC2
HOATZ
CSRNP2
BTG4
SVOPL
MED16
B4GALT1
SHANK2
ATG9B
ABCB8
GLYAT
ZNF366
RAD23B
PTCD1
PLD5
H4C14
H3C15
H3C14
H2AC19
H2AC18
CPSF4
ASPRV1
RASL11B
POLR2J2
CLEC12A
UIMC1
SPINK4
H4C15
CCIN
LASP1
HAPLN1
GAPDH
OSBPL8
TNFAIP8
SLC17A5
BIK
CTNND1
ST8SIA6
FUT3
SUPT7L
SLC4A1AP
SLC25A13
SCRIB
RPS14
IER3
FLOT1
ELF3
SLC23A2
CMC2
TRIM37
PIP4P2
FAP
KEL
CNOT11
BNC1
TUFT1
SCNN1A
LTBR
AKNAD1
HSD17B1
KCNJ1
RBM47
PTPRF
SNX29
CLYBL
PSMD6
PELO
MTUS1
ITGA1
BANK1
FHDC1
OR5H14
ZG16
DEPP1
KRT7
RAPGEF1
PRSS16
TPK1
LHX4
ATE1
WWC3
TOMM40
RIN2
VSTM5
TAP1
SETD1A
PSMB9
ORAI3
PEF1
TOR2A
PHF20
SPAM1
APPBP2
SLC28A3
PLPP3
CBLC
LRRC45
CELSR2
ZMYND8
PRPS1
ADAM18
SMARCA2
PAK6
H2BC4
H2AC6
TXK
OSBPL9
RFLNA
SPTAN1
DCAF8L1
COASY
ANXA3
ABCG1
RNASE7
RNASE13
CSGALNACT1
SLC38A9
DLC1
MSX2
NPL
IFNL3
TUBG2
KANK1
GAS2L3
CLPB
IGFL4
NAA30
HES1
DGKZ
TRABD2A
SELENOI
KIFC3
CYP27C1
ADGRF3
RHOV
IL22RA2
HSPB3
GGCT
TMEM254
GDF3
DPPA3
PMEL
YPEL3
GDPD3
MREG
NHSL1
DAW1
TSPAN9
KIF22
AP2S1
NRAS
FGFRL1
TTR
DHX40
KCNJ15
ULK2
TOMM34
SERPINE1
CLUL1
CETN1
TMC4
PLEC
HOGA1
ANKRD2
WDR53
MAVS
FBXO45
CYRIB
CLPSL1
CHRNA10
ARHGAP35
TMPRSS11F
SLC25A26
CREB1
WNT6
TPST2
GOLGA5
PTPRE
DEK
BCAR3
TMEM41B
TENM3
GM2A
SH2D7
H2BC21
H2AC21
H2AC20
GRHL3
FAM53B
ARID5B
MPP4
CDH18
TAF1C
FYB2
CALD1
TMCC3
SASH1
S100A9
H4C8
GHR
SH3GL3
CORO2A
PRSS8
EPHB2
SELENOH
HCAR1
H2BC11
H2AC11
RNGTT
MRPL38
ANKRD31
ZNF358
PDGFRL
MCOLN1
CAP2
TTC8
REEP3
JMJD1C
CLDN6
AIG1
TBL1X
TALDO1
SCIN
EHHADH
CXXC5
SH2D1B
CAMK2G
ELMO3
TRMT12
PIK3C2B
TRIM5
TRIM22
STX16
SLC25A25
MBOAT2
BASP1
CLIP4
RHPN2
OVOL2
SIGLEC10
SALL4
SLC43A2
NEK6
NANOGNB
FRYL
CCDC68
SLC25A17
CACNA2D3
C12orf66
KRT18
TPCN1
MAPK6
STON1-GTF2A1L
PTPN3
RABGAP1L
THOC7
NR2C1
ACOXL
FERMT1
SEPTIN3
TTLL4
SLC39A14
RHEX
WIPI1
THNSL1
LPCAT1
EXO1
ANOS1
NRBP1
DDX43
ZNF285
TEX14
RAD51C
MRPL58
TMC1
TGFB3
IFT43
HSPB8
EGFR
SORT1
NIT2
EPS8
PRRT1
PPT2
MFSD4A
CDC14B
CD164
TRIM48
KALRN
ATMIN
SULF2
PPP1R11
POLR1H
MYBBP1A
GGT6
TP73
SMPDL3B
SLC52A3
HAVCR2
PFKP
LMOD2
LDLRAD2
AEBP2
TIAM2
CREM
CALHM4
UBE2H
PRLH
TSPAN15
PPP1R15B
CARD17
ZNRF3
TRIML1
TNIP3
NODAL
LRRC14B
FAM111A
USP39
TMEM150A
RNF181
ERRFI1
DNMT3A
C2orf68
BRD4
MS4A7
NAGK
CD36
EXPH5
CARS1
PPARG
ZFPM1
CCKBR
MSI2
CNNM3
ARL6IP5
CLDN4
IGSF5
CYB5A
RMND5B
CDCA4
PADI2
SCARA3
PLEKHM2
INTS2
FMN1
EPB41L3
DNAJB2
FBRSL1
RPL15
NKIRAS1
GGTLC3
BIN2
HIVEP2
FOXO6
MTF1
FOLR3
SYCE2
SLC4A8
HEXIM1
GALNT6
TFPI
SLC49A4
RHBDD1
IRS1
HSPBAP1
TMEM131L
RDX
PCCB
TSPAN3
TMEM94
EDARADD
DNAJB13
FCGR1A
EPB41L1
APP
RHNO1
GPD1L
FOXM1
TNRC18
SMARCD2
ZNF697
TBC1D1
STK3
MGLL
PSTPIP2
ITIH5
TIMELESS
PPY
DTNB
CHD2
APOBEC3B
SPNS3