ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003071 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◣ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

PALM2AKAP2
STK32C
LRRC27
PSG5
PLA2G4D
RBL2
ARHGAP5
PSG9
MTRNR2L8
PSG1
PSG11
NDST1
SNX32
MAMDC2
SMARCC2
MKLN1
CDADC1
BACH2
GTF2A2
FRY
SLC5A10
PSG7
MTRNR2L2
MSH3
DHFR
SEC22B
SLC6A4
DOT1L
AP3D1
CRPPA
RAB17
HSD17B4
ITGAM
SERBP1
PSG8
CCDC141
DUX4
PIWIL3
MTDH
TNFRSF19
NIPSNAP1
YWHAE
ADAM17
PSG3
PPP1R14D
WWP1
ENTPD1
LTBP2
SPNS2
ZDHHC1
MS4A2
ANKRD23
C18orf21
SLC25A44
IFNAR1
RNF43
PSG4
TMTC2
ADAM10
ALOX5AP
MYOCD
TMCC1
ADGRG3
HCAR3
HCAR2
FAM110A
CAMSAP3
NEDD9
PATJ
LRP2
HEG1
EHF
TMEM52B
OLR1
EXOSC2
YTHDF1
CDH1
FABP7
TMEM270
METTL27
HROB
HDAC5
DPEP2
LNX1
ASB2
QPCT
AMN1
TAGLN2
PSPN
ALKBH7
COLEC12
GSTO1
SLC10A6
BCL2L13
ATP6V1E1
KRTAP2-2
KRTAP2-1
KRTAP1-1
ZNF341
PXMP4
PTK2B
ATP2B1
MYEOV
TMED10
KIAA1191
FXYD5
ALG10B
RLBP1
SOX9
SLN
ANKRD40CL
SLC7A4
GTPBP4
ENPEP
SNRPE
CENPX
LRRC45
UBE4B
CCDC200
PCOLCE2
OR10V1
PHLDB2
TRUB1
WDR74
STX5
MIS12
DERL2
RSAD2
NAGLU
LYN
JADE1
WDR93
PEX11A
KRT1
TET1
RABGGTB
SRGAP2
RYK
TAS2R41
RASA2
C9
EID2B
EID2
SPG7
SEC23A
GEMIN2
EPS15L1
ABLIM1
NCBP3
FOCAD
SH3BP4
ETV3
CDK19
AMD1
ZNF331
ID1
UHRF1BP1L
SLC7A6
SEMA6A
NTAN1
GALNT11
ZNF474
SH3YL1
ACP1
IL34
ACER3
CCDC81
LOC105378979
KIF5C
MAPK10
ANKRD1
ZNF740
CSAD
SLC7A9
COL23A1
ARL4D
SFXN5
LIMS4
UBE2J1
LIMS1
UPK1A
DNAJC15
SLCO2A1
SH2D4A
SHISAL2B
COMMD8
NR2C1
ZNF749
KIT
PKIB
BACE1
KRTAP3-2
KRTAP3-1
OLFML1
ACSS1
MEST
PET117
KAT14
PRR5
HECTD1
DOCK5
MARVELD3
RARS1
PRKCZ
ELF5
ALPP
IL10RB
ID3
ASAH1
TPD52
UBXN11
NKX2-3
FGD3
PSG2
TSPAN10
NPLOC4
DNAJC21
IFFO2
EBAG9
SLBP
NME4
DECR2
POU5F1
SLC19A3
SLC18A1
ZNF407
PISD
TGFBR1
CHI3L2
ROPN1L
RGL1
ARPC5
EFNA1
CCSAP
IRAG1
CDC42SE2
SYBU
PTPN1
EIF2AK4
GABRR3
MGARP
FDFT1
HSPA2
ADH4
FGD4
FEM1B
TTC23L
GPR173
MED16
NSD3
LETM2
LASP1
CITED4
SLC15A2
ITGA2
OSBP
CTPS1
NIBAN2
UTRN
PLAC8
SLC7A7
MRPL52
ZNF641
GCM1
CXADR
FBXW8
ITLN2
LGALS4
CHRNA10
PRKRIP1
APOL6
ATP13A2
HEXB
C6orf163
TIPIN
GSTA4
TMPRSS2
DNMT1
MED15
WDR53
FBXO45
ARHGEF10L
DEFB130B
DEFB130A
GLIS3
LMO4
ZNF444
RALBP1
AFF4
TCN1
RNF126
FSTL3
TIAM1
DUSP21
SDC1
LDLR
STARD8
SLC30A1
EYA3
CCR5
INSL4
C1QTNF6
ARHGEF18
HACD2
FAP
MRPL38
EPHB2
CYLC1
ZNF22
LYRM1
DCUN1D3
IKZF3
SLC20A2
METTL21A
DLG2
ODAM
SMIM15
PCDH15
PPFIBP2
RRS1
ADHFE1
FZD6
P2RX6
GPR78
DHCR24
USP6NL
TMEM141
ANO6
ITM2C
AMOTL1
AZIN1
FKBP1A
TAF6
CNPY4
CORO1C
BAMBI
ZNF398
TMEM245
C6orf132
PELO
ITGA1
CFAP45
ZNF343
SLC6A2
TEX46
MTRNR2L9
IBTK
CBLC
ZNF175
SEC11A
TMEM88B
ANKRD65
ACOT6
SLMAP
HERC4
CLEC12A
PTBP3
PTTG1IP
KLHL5
ZNF592
SETD4
CBR1
FBL
FAM89A
PHTF2
SLC2A8
CENPS-CORT
CENPS
SPAM1
THNSL1
CHMP5
BAG1
ADGRF5
TXNDC2
MCCC2
CXCL2
PKP2
PPY
RBM15
TSHB
HMOX1
KANK1
SEH1L
ACVR1
UBL3
HPDL
ULK2
STS
ALS2
ZNF367
ZNF362
BIN1
MRPL23
TPST2
TCF15
EHD4
ZBED1
DHRSX
LRRC14B
TRMT9B
VPS37C
KCTD7
FNBP1L
DENND1C
CRB3
LOC389199
AFAP1
SLC38A9
BMP10
DGKD
MESP2
LATS2
SIK3
SIX1
USP39
TMEM150A
RNF181
C2orf68
GIPC1
ART1
CYB5A
NDUFB5
MRPL47
SLC28A3
PLD5
KEL
ZNF106
SNAP23
KRT71
SENP5
IL1R1
UIMC1
OVOL2
LSM14A
FBRSL1
TRAM2
CDCA4
CRK
POLD4
RBFOX2
GHR
PSTPIP2
TLK1
MIDEAS
CLIC4
CD46
CST4
SLC1A5
ANP32C
CTNND1
NCOA3
CFAP92
SGK3
SAA1
CMTR2
RNASE7
RNASE13
NAV2
SLC17A5
RGPD2
RGPD1
CALML5
BNC1
SLC7A8
LHX4
NUP153
TNS3
APBB1IP
SNX31
TMPPE
GLB1
CHN2
CHST6
SNX27
SASH1
DDX43
KDM5C
HOATZ
BTG4
ANXA3
SLC44A1
MB21D2
IQGAP2
RPL15
NKIRAS1
CHAT
PIP4P2
ADAP1
CPNE8
HOGA1
ANKRD2
TTC39C
PLAAT5
TET3
ZNF853
LETMD1
SPOUT1
KYAT1
SERPINE1
LIFR
PRPS1L1
AIF1L
MAB21L4
CROCC2
TMEM82
SLC25A34
PSG6
GLYAT
MTF1
IRF8
RASL11B
PADI2
NR1D2
SLC25A13
OSBPL9
HIVEP2
VIT
CLPSL2
LSMEM1
ST8SIA6
PARP16
SYNPO
RHPN2
TULP1
KLRC3
NDUFA12
PIK3C2A
RTN4
CLMP
MYO6
GOLGA5
CCKBR
SIX2
MYCN
SAMD7
TOMM40
RNGTT
MYBL2
WIPF1
TXNRD1
KRAS
CTNNAL1
SH2D7
SLC39A14
NBR1
SLC49A4
HSPBAP1
CD55
ACER2
SUPT7L
SLC4A1AP
TBX2
RBM47
BASP1
BRD4
ASPSCR1
TMEM41B
LCMT1
ANKUB1
SLC22A6
RAPGEF1
PRSS8
RIPOR2
MARCHF7
PLEKHM3
CYRIB
SCIN
C1QBP
ST7
RASSF2
TUBG2
DAW1
TPCN1
IQCD
MED12L
SHANK2
YPEL3
GDPD3
VTN
SARM1
ERP27
ARID5B
PLCL2
MMP19
MIGA1
KPNA3
IFNL2
ACE2
ASB15
TACC2
FUT3
RFLNA
OTUD7B
DNASE1
GAPDH
ZG16
KIF22
CAMK2G
PAK6
AP2S1
ARHGAP35
FYB2
SH3GL3
FRYL
IBSP
FREM2
NANOGNB
SLC4A11
KIFAP3
TSTD1
SVOPL
TRPM6
SPOPL
C1orf159
PTPRF
TSPAN15
DCTD
LTA4H
AKNAD1
PHF20
TACR2
LACTBL1
GDF3
DPPA3
SEPTIN3
ATXN1L
DPRX
EGLN3
ASAP1
MUC3A
GNGT1
GNG11
PRPS1
DNMT3A
NEDD4L
SLC12A3
OR5H14
ARHGAP40
BAIAP2L1
ART4
VOPP1
LARGE2
KRT19
USO1
RXRA
CMTM3
SPTAN1
SPR
DHX35
FMN1
NCOA1
OR2B11
SIRPA
KIFC3
MRAP2
ASPRV1
AIG1
ABLIM3
VPS29
RAD9B
LOC102724770
DGCR6
AFF1
CMC2
TAP1
PSMB9
FAM53B
NIT2
FBLN2
YY1
ACOT2
SPTLC2
PEF1
ZNF358
MCOLN1
USP7
ATR
HEATR4
PDE4DIP
EPOP
LGR5
PLXNB2
FRG2C
BAZ1B
SNX29
IL22RA2
GGCT
DNM1L
BANF2
HNRNPF
OR13D1
TMCC3
MFN2
SRSF4
EMC2
JAM3
CCDC153
CBL
DEPP1
NAGK
GMFB
RBBP7
LDLRAD2
ZFPM1
PLEKHM2
CXCR6
CSF1R
SRI
SLC43A2
CLCN4
RPL26L1
RPL17-C18orf32
RPL17
TRIM17
H3-4
CLTC
BABAM1
PDGFRL
SPNS3
MGAT4A
PARD6B
C1GALT1
RHOQ
ATP6V1E2
B4GALT1
TSPAN9
TTC8
SLAMF1
FBXO42
USP44
TNFAIP3
TOMM34
PMEL
NRBP1
PORCN
EVPLL
CLUL1
CETN1
MAVS
DTNB
HMGCS1
PAPPA
FAM111A
CARS1
EML5
KRT8
TP73
SLC4A2
RAB10
NOB1
CNOT11
SGK2
GRM4
USP11
STXBP6
CDK16
TACC1
TENM3
CORO2A
TRIML1
SPG11
PATL2
TAAR1
SESTD1
SELENOH
CAPN5
NPL
ELMO3
PIK3C2B
SMIM30
PLEKHA8
FKBP14
TRIM5
TRIM22
RAB44
RAD23B
TNFAIP8
TRIM45
PEX3
ADAT2
SEC63
TRABD2A
MYLK3
TTR
LMOD2
FAR2
CDR2L
SEPTIN9
CSH2
PRM1
PHF6
CRISP3
ATE1
MSX2
TTYH3
GINS1
ABHD12
ARL6IP5
BIN2
CYP1B1
SLC18B1
ZNF366
BANK1
ATXN7L1
MRS2
MRPS23
SLC6A9
HSD17B1
BRD1
FGF1
GM2A
CUL2
NR4A1
ITGB6
CNNM3
AGFG1
G3BP2
MCAM
RHOV
SNRNP35
CCIN
RABGAP1L
SIGLEC6
SLC35A2
PIM2
TMEM212
TPK1
NEK6
CACNA2D3
LDAH
CLDN10
ADGRF4
OSBPL8
MBOAT2
BCR
ZRANB1
SLC45A4
TALDO1
MRPL58
ZNF552
WWP2
KAT2B
RIPOR1
FAM102B
CALD1
PPARG
FNIP2
KIAA1586
WWC3
SETD1A
ORAI3
MREG
EPS8
CDC14B
AEBP2
ZNF503
TXK
CXXC5
NFIL3
MAGI1
EDNRB
SYDE2
TMEM107
CCNL1
PRRT1
PPT2
TIAM2
GPD1L
SLC7A2
PACSIN2
HAPLN1
FCGR1A
PHLPP2
ERGIC1
INSR
NUBPL
S100A9
CITED2
LCN2
GPRIN3
LOC388282
SFXN1
NANOS1
PTGES
HK1
COASY
SLC25A26
EIF3D
TRPM1
CREB1
ACOXL
RGMA
ELMOD2
BAIAP2
PCCB
LRCH1
SLC39A10
TNRC6A
CMC1
TMEM254
MYBBP1A
GGT6
KTN1
MCCC1
CNNM4
OGDH
SPIDR
ABCG1
DEK
MTUS1
RTKN
CD2AP
INO80C
PARP8
ANKRD33B
OR8S1
MTRNR2L1
FHDC1
BCAR3
SCARA3
HPS5
GTF2H1
ZNF76
TMPRSS7
SMPDL3B
RCC1
MICB
PRORP
PPP2R3C
BCOR
HSPB2
CRYAB
C11orf52
ATP6AP2
CELA1
UCMA
CSRNP2
CNDP1
LEPR
NUDT13
PARP4
NFYB
CLYBL
EPB41L1
TMEM185B
ANXA6
EFCC1
PTCD1
CPSF4
SMARCA2
DOCK9
DNAJB1
MOG
IL1F10
EXO1
TFPI
SPAG9
C11orf94
BCAT2
UGCG
TFE3
MPP4
TPRN
TMEM203
SSNA1
NDOR1
ANAPC2
ITPRIP
EHHADH
ZNF697
CEACAM19
GNG10
SEPSECS
ADRB3
MYO18A
LHX8
WNT6
PTPN3
FOLR3
CSPP1
COPS5
KMT5C
ALOX5
SLC2A3
USP43
AKTIP
IL1R2
KCTD14
RCL1
PDGFB
GRHL3
RDX
ADGRG1
HSF5
CARD17
CD177
TBC1D12
TRIM33
ADAM18
TMC1