ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SOX9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◣ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MAMDC2
DUX4
LOC102724770
DGCR6
FRG2C
SLC35E2B
PAX8
BCL9L
ART1
FRG2
SLC35E2A
TINAGL1
MTRNR2L8
PKDCC
POR
ARL4D
MTRNR2L2
MSH3
DHFR
RORC
C2CD4D
PPDPF
PBX2
GPSM3
PHRF1
NOXO1
CCDC200
KIF5C
ATG101
SNX16
CDYL
SMARCD2
PDXDC1
RGPD1
SNAP29
PI4KA
PFDN4
SYNGR3
GFER
RGPD2
POLG
TRIM48
WDR74
STX5
PLEKHB1
IQCH
AAGAB
COL23A1
TBL3
MTF2
PRKCI
MUC3A
LZTS2
TAF15
PARK7
DAB2IP
ARRDC4
MYH14
SH3KBP1
PPIB
RNASEH2A
PRDX2
MTRNR2L1
MYO5C
KIF12
LRRC75B
GGT1
SOWAHA
FAM53C
CDC25C
EIF3B
OGA
PTPRN2
CNOT6
KLK6
SDF4
B3GALT6
PTDSS1
MTERF3
LSR
DLST
AKIRIN1
GIT2
ANKRD13A
PCDH1
NOP56
PGBD4
EMC7
YY1AP1
DAP3
FAM227B
DTWD1
CENPP
STX16
C1QTNF12
SEMA3B
LRATD2
MYL12A
GNB2
SMIM41
DOLPP1
ZBTB32
EED
ARHGEF1
FRAT2
CLDN9
ATG16L2
RNF13
WDR97
MAF1
CYC1
PIK3R3
RHBDD3
MYO9B
HAUS8
EWSR1
TRNP1
SLC35A5
ATG3
ZNF775
CMC2
CENPN
USP15
PLEKHG4
CYP2W1
COX19
TECR
DNAJB1
FOS
PMF1-BGLAP
PMF1
SOX8
LMF1
TMEM129
TACC3
PRR19
PAFAH1B3
FAM102A
SLC25A41
KHSRP
FAM72B
RAB4B
MIA
NDST2
UNKL
MRPS24
UIMC1
C16orf91
FRAT1
FAM72C
PRKDC
MCM4
PDE8A
LY6L
MYL12B
CDCA7L
SETD5
TNNI3
DNAAF3
FGFR2
MTRNR2L9
PMVK
PPP2R2C
CNFN
PTOV1
SLBP
BTNL9
DNMT1
ETNK1
UROS
BCCIP
NOTCH1
ZNF217
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQCE
SPTBN1
TIGD5
EEF1D
KMT5B
SELENOW
COMMD6
ETV2
COX6B1
MAT2A
BCL6
FAM72A
HMGCS1
CFDP1
PAQR4
KREMEN2
WWOX
PGP
HBP1
DGAT2
TAF6
MBLAC1
FUS
CNPY4
TMEM63A
LEFTY1
ZNHIT1
PLOD3
PPP6R1
PDE4DIP
AMOTL2
KCNH8
LAMB3
VPS37B
ABHD11
PAXIP1
UCHL3
RPS29
WWP2
ATP6V0C
AMDHD2
FLCN
ZNF219
TMEM253
PPP5D1
CALM3
WASL
EAPP
EIF2D
CIC
TSKU
XRRA1
WDR38
SPCS2
RPL35
ARPC5L
NCOA3
RTKN
ACSS1
HMGB1
TNRC18
LOC100129484
DGLUCY
USPL1
E2F6
KANSL3
FER1L5
BRICD5
MTBP
MRPL13
H3C6
H2BC8
H2AC8
TSPAN4
POLR2L
CD151
SAP30BP
RECQL5
ABTB2
RMND5B
SPATC1L
TESC
ARNTL
METTL25
CCDC59
PNPO
RNF103-CHMP3
RMND5A
TMEM242
ZNF609
NOCT
BZW2
ANKMY2
FAM72D
LIN54
PRDM10
NOL8
UBE2C
IL17RB
CHDH
NWD1
ZCCHC4
STK35
ITGA6
CDIPT
ZBTB3
CDON
USP3
FOSL1
TMEM160
MAPK6
PLP2
MAGIX
STIP1
MRPS31
TRIP4
PCLAF
ZNF285
PDE6A
DBP
CA11
TRAPPC6B
PNN
OXR1
FAM227A
CBY1
ZNF229
SHKBP1
FANCI
SLA2
NUCB2
UBE2B
GATAD2B
CDKL3
TMEM260
C6orf226
PROSER3
LIN37
HSPB6
IRF2BP2
HMX2
ZFAND3
DPY19L4
DPP9
PIP4K2B
E4F1
SSBP1
FGFR4
KAT7
MRPS11
MRPL46
RASSF7
LMNTD2
DRAP1
C11orf68
PSMD14
C21orf91
RBM7
C11orf71
PITPNM1
ZNF335
KRT19
KRT15
TRAPPC9
PSIP1
CASKIN1
CABP7
LUC7L2
FBN3
DNAJA4
SRI
RBM39
ADAMTS9
LAD1
ANKRD39
PRRC2B
HMX3
TNS2
SLC25A42
TP53BP2
HNRNPL
LYSMD2
ZNF8
FAM83D
FRMD5
NDUFB1
CPSF2
TTLL7
EPN1
CNP
HDAC2
TEDC1
HBD
HBB
SYVN1
LEPROT
LEPR
USP17L20
ARAF
USP17L22
UFSP2
C4orf47
CYP2R1
SMIM35
THOC1
TMOD2
DISP3
NCDN
KIAA0319L
WASHC5
NSMCE2
STK32C
LRRC27
SLC5A1
STX18
KANK1
TTC9B
SRPK2
CCNP
ANKRD12
TCP11L2
LRR1
RPL22
RNF207
MIA2
KPNA2
ANP32B
RRBP1
TES
RELA
PRCP
DDIAS
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
PRDX1
ZNF3
COPS6
TARDBP
HHIPL1
CCDC85C
ATAD2
RNASEK
RABGEF1
C17orf49
H3C15
H3C14
FYN
MICAL2
ARHGEF19
H4C14
PRR3
GNL1
TBC1D14
CLDN12
RAB33B
UBA1
TMPRSS3
MRPL21
IGHMBP2
TEPSIN
NDUFAF8
SS18
LANCL2
STXBP3
DNAJC14
SLC38A2
ALDH3B1
ARHGAP19
MRPL20
CCNL2
PLA2G7
TOP2A
C6orf62
SHROOM1
GLIPR1L1
CAPS2
TBC1D17
PNKP
AKT1S1
TSPAN8
ITGB8
PELI1
ZNF180
UBE2A
CXorf56
CNOT3
GTF2IRD2
ANP32A
RUVBL1
ZFAND4
HSP90AB1
H2AC19
H2AC18
UQCRC2
OTUD7B
RPN2
MROH8
C2orf42
PLPP2
FMN1
PPP1R13L
POLR1G
FAM228B
NUP107
UQCRQ
LEAP2
GDF9
GBA
MBNL1
UCKL1
ATP8A1
SELENOH
PTPRH
PIF1
CCDC85B
INTS12
GSTCD
HECTD2
ZNRF3
ADAP1
WRAP53
TP53
MGRN1
AURKAIP1
ZNF572
PSMD6
CCDC9B
BOLA2-SMG1P6
TSC22D1
H2BC15
H2AC15
TMEM167B
TANGO2
ARVCF
SP2
ACAP2
ATP5PD
MSANTD4
ZMYM5
PRR15L
FMC1-LUC7L2
FMC1
OGDH
FBXO5
ETV4
SSNA1
OTUB2
ATF7-NPFF
ATF7
ANAPC2
TMBIM4
PCYT1A
NUF2
UGT2B7
MYT1
OSBPL2
CBX5
SLC33A1
CNOT1
POLR2J3
RUBCNL
PLCE1
NBEAL2
CCDC12
TMEM143
SYNGR4
TMEM45A
RASEF
ITGB3BP
EFCAB7
PTPRA
ARHGEF38
EFNA4
TBRG4
OTOGL
BAZ1B
PTP4A2
MYBL2
TRPV4
EIF1AD
CST6
BANF1
ATP5MC1
TMEM168
PSPN
ALKBH7
PRR7
MED23
DUSP6
HYAL1
VTCN1
RPS3
NFE2
HPS5
GTF2H1
CENPE
RPL19
CACNB1
MRPS23
SEPTIN9
GALK2
BCAS3
MRPL40
HIRA
HDAC1
TRIM37
RRM2
GTF2IRD2B
TLE3
TMEM94
OPA1
USP17L21
USP17L12
PPM1D
LSG1
CALU
UBALD1
CALR
BCL2L1
NFYC
ADPGK
SPRYD3
INAVA
SMC4
SLC35B2
NFKBIE
IFT80
MADD
HNRNPUL1
FZR1
FRMD6
DOHH
KCNK4
GPR137
BAD
SORT1
ZMYM2
SLC24A1
GTF2H2
RNF43
RDH12
RDH11
UTP18
MBTD1
TP53I3
SF3B6
UXS1
FAM20B
CLTC
TSKS
AP2A1
SOD2
SKA2
PRR11
H2AZ2
PELATON
ABHD2
EMSY
DCLRE1B
AP4B1
SRCIN1
OLFML2A
NR6A1
SERTAD1
RNF6
SLC44A1
RBBP5
SLC11A2
H4C15
SMC3
PCYOX1L
MRPL44
HACD3
FDFT1
ARHGEF12
SPAAR
PEX3
HRCT1
DSTYK
ADAT2
TMEM262
SASH1
MTCH1
GOLGA6L4
KMT2E
CBWD5
EIF2AK3
BMP5
ZNF484
WDR11
MCM7
DYNC2I1
AP4M1
MYO19
GGNBP2
PRR14
FBRS
TM4SF1
TMEM258
PDK2
FEN1
MAST4
KMT5C
TUBD1
RPS6KB1
RBM42
TUBB4B
KIAA0895
FAM166A
SLC25A10
MRPL12
LRCH4
FBXO24
FAM86B1
CEP63
ANAPC13
MTSS2
GIPC1
ACVR1B
SSR3
HNRNPA1
SIRT2
NFKBIB
ZKSCAN1
MACC1
COMMD2
PRKACA
PDE8B
MRPL45
CNNM2
CBWD3
CANX
FZD1
UFD1
CDC45
BACE1
UBC
SCP2
TAF13
SART1
PRKAB2
CHD1L
ZNF519
ATG9B
ABCB8
MRPS10
C20orf204
RPS7
COA1
TFPT
PRPF31
UTP23
SFXN5
ATP5F1E
GET3
FBXO32
SF3A3
TMED9
GPR84
B4GALT7
SREK1IP1
SHF
MYADM
LYRM1
DCUN1D3
CWC27
SPATA20
CD164
SORBS3
MIA3
LEMD2
H4C9
H2BC12
H2AC12
FARSA
ARHGAP39
YWHAQ
RAB28
SNX17
EIF2B4
FMO5
PDIA4
ZNF687
PXMP2
POLE
NME1
VMP1
TMCC3
PTRH2
VGLL4
LMCD1
SYT8
RAD23A
RAC3
PTMA
FBXO33
CNPY3
NREP
PTCD3
POLR1A
USP17L11
EEFSEC
CUEDC1
TESK2
MMACHC
TREH
ZNF574
TADA3
DIAPH1
ARPC4-TTLL3
ARPC4
NDUFS7
ZNF300
TRAF2
IFT46
ARCN1
NOL11
GOLGA6L3
CTDP1
HMGCR
MAP11
PRORP
PPP2R3C
TOM1
AQP5
NHLH1
DICER1
ARID2
VIRMA
TMEM229B
CSPP1
COPS5
SRSF7
MPP7
MGLL
COPS7B
LRRC37A3
ZNF24
ZNF862
RPL26L1
RWDD1
ISOC2
USP17L18
DERL1
ANKHD1-EIF4EBP3
ANKHD1
RBM28
PARD6B
COQ8A
SUPT4H1
RPS11
RPL13A
ODC1
LMOD3
PSMG2
IVD
CDK12
ARHGAP27
UGP2
STEAP2
TBC1D30
HLF
NFIB
MTMR14
INTS5
ECHDC2
SCAND1
NLK
B3GALT2
GTF2H2C_2
GTF2H2C
THUMPD1
ETV6
DENR
TRIM2
HEXIM2
PKNOX1
TRIM29
COL9A2
RBM48
PEX1
NUDT2
KIF24
POLR2G
PI4K2A
ZNF831
PRKAG2
KMT2A
FAM222B
EIF3E
EXOSC10
GOT1
S100A13
S100A1
IFI35
CHTOP
RHBDL1
EFR3A
RNF169
ZBTB45
HR
ARHGEF7
TTYH3
TSR3
GNPTG
PACSIN2
KIF1B
ARL6IP1
SP1
MOB4
SZT2
MED8
DHX36
ZNF513
STYXL1
MDH2
MCIDAS
CSNK2A1
KRT8
FRA10AC1
HDGFL2
SH3TC2
IFT52
TATDN1
NDUFB9
VBP1
PDE6D
MAP4K5
ATL1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BICD2
ZSCAN22
SLC46A3
WASF1
PLAG1
NARF
CYBC1
CHCHD7
CDC40
USP30
RPL27
CHCHD6
ARHGEF5
VASP
AK2
PSMA7
WDR31
TUSC2
PRICKLE2
HYAL2
BSPRY
ATN1
PTCD2
MRPS27
ECPAS
RPS19
HACD2
RAB5B
PMEL
CDK2
LAMP1
XPA
DDR1
TOP1MT
RHPN1
METTL9
CLIP2
ZNF48
TBC1D31
SPTBN4
BAZ2A
ATP5F1B
NSFL1C
TRAF4
GTF3C3
C2orf66
PALB2
DCTN5
COL21A1
CD55
ARL14EP
TRIB1
CFAP20
CCT5
ATPSCKMT
COPS2
PANK2
RUNX1
RBBP8NL
MOCS3
DPM1
CBWD6
PRR5L
WDR62
THAP8
SLX4IP
RUVBL2
MKKS
MAMSTR
GYS1
EPN3
AKR1E2
EPYC
TMEM41A
IL23A
C8orf48
BNIP1
RAB7A
PPP2R2B
PLOD2
TMEM209
SSMEM1
NDUFS3