ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003072 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◢ SRX10003071: Trophoblast stem cells

◣ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

PALM2AKAP2
MTRNR2L8
MAMDC2
PSG5
ARHGAP5
MTRNR2L2
MSH3
DHFR
STK32C
LRRC27
RBL2
PSG9
DUX4
KIF5C
MKLN1
SMARCC2
PSG11
WDR74
STX5
PLA2G4D
HSD17B4
RGPD2
RGPD1
PSG1
ADAM17
BACH2
CCDC200
CDADC1
PSG3
PSG7
COL23A1
EXOSC2
RNF43
NDST1
ARL4D
ALOX5AP
PSG8
SLC6A4
SLC5A10
MTRNR2L1
TMEM52B
OLR1
SEC22B
C9
NEDD9
NIPSNAP1
SNX32
CENPX
MTRNR2L9
MIS12
DERL2
SH3BP4
PKIB
PSG4
CCDC141
FABP7
NR4A1
ZNF503
BCL2L13
ATP6V1E1
DOT1L
AP3D1
MUC3A
PPP1R14D
LRP2
KRTAP3-2
KRTAP3-1
YTHDF1
DNMT1
RABGGTB
MYOCD
PMF1-BGLAP
PMF1
SERBP1
ANKRD23
PTBP3
PACSIN2
WWP1
HEG1
MYEOV
CDH1
PSPN
ALKBH7
CCDC81
SPNS2
HCAR3
HCAR2
CLCN4
FRG2C
HROB
HDAC5
TCF15
TNFRSF19
CRPPA
RAB17
TAGLN2
KIFAP3
UPK1A
SLC7A7
MRPL52
ITGAM
GTF2A2
ETV3
SNRPE
SLC10A6
KRTAP2-2
KRTAP2-1
KRTAP1-1
NAGLU
LOC102724770
DGCR6
ASAH1
SEC23A
GEMIN2
ADGRG3
COLEC12
IRF8
WBP1L
WDR93
PEX11A
SDC1
PHLDB2
TPD52
ACSS1
DNAJC15
TMEM141
ADAM10
SIX2
IRAG1
COMMD8
SLCO2A1
PISD
BABAM1
ENPEP
TAS2R41
LETMD1
GSTO1
SLBP
UBXN11
GTPBP4
FAM110A
ZDHHC1
ART1
ENTPD1
KRT1
ANKRD40CL
PTK2B
MTDH
CHI3L2
DPEP2
SFXN5
ZNF740
CSAD
ADH4
AMOTL1
OR10V1
BAMBI
FDFT1
HECTD1
RIPOR2
CCNL1
SLC25A44
GCM1
ANKRD1
UBE2J1
C18orf21
FAM151B
TLK1
KRAS
DNAJB2
PLAAT5
CFAP45
BCAR1
CXADR
BACE1
PIK3C2A
CLPSL2
CLPSL1
IL10RB
P2RX6
PARP16
BIK
LHX8
TMCC1
ZNF444
GRHL3
PKP2
TRUB1
RNF126
FSTL3
EBAG9
RASA2
EFNA1
TGFBR1
TXNDC2
LDLR
STARD8
ARHGEF18
TMED10
FGD3
NAA30
SLC7A4
SH3YL1
ACP1
METTL21A
EPS15L1
FAM89A
ZNF175
TMEM245
ATP2B1
IFNAR1
EVPLL
TTC23L
TRPM1
C1QTNF6
GALNT11
FRG2
PRR5
ITGA2
SLC25A17
PATJ
NOB1
LATS2
SLC18A1
ACOT2
ID1
MAPK10
ALPP
TMPPE
GLB1
HAPLN1
MEST
CHST6
KIAA1191
RSAD2
SYNPO
PRKCZ
ACOXL
SOX9
TTLL7
RHOQ
ATP6V1E2
TRPM6
IFNL2
GLIS3
LGR5
LIMS4
ZNF362
ITLN2
SPOPL
TMC1
SRGAP2
LYRM1
DCUN1D3
ZNF474
SLC22A6
OR5B3
SLC2A8
FXYD5
NSD3
LETM2
FNBP1L
EGLN3
IKZF3
USP6NL
SAA1
CORO1C
EPB41L3
MESP2
DPRX
EYA3
GJA10
BANK1
FOXN3
TMTC2
PCOLCE2
FOCAD
TRAM2
SLC6A9
B4GALT1
RYK
CCR5
NME4
DECR2
KCTD7
KRT19
SLC19A3
SLC12A3
SLC15A2
ZNF22
CAMSAP3
FBL
DEPP1
SLN
ASB15
SLC25A13
SEMA6A
SYBU
HSD17B1
COASY
LSM14A
VSTM5
IL1R1
CD164
ASPRV1
UNC45B
NLE1
ZNF592
ERP27
RIPOR1
AEBP2
PTTG1IP
IQGAP2
TXNRD1
RXRA
FGFRL1
ZNF320
GATA2
LYN
CD46
DHX35
SPIDR
KDM5C
KCNJ1
CLYBL
SIK3
SLC4A11
SAMD7
CLIC4
MSI2
CCSAP
NIBAN2
TULP1
ALS2
ITGB6
PTCD1
CPSF4
PHTF2
CLDN10
SMARCA2
CHN2
MS4A2
CTPS1
SLC20A2
LGALS4
NR4A3
PIWIL3
PHRF1
TMEM212
SNX31
ZNF366
LTBP2
PRKRIP1
TRIM48
CDC42SE2
KRT8
SLC30A1
LIMS1
SVOPL
DCAF8L1
ABLIM1
EHF
TIAM1
CENPS-CORT
CENPS
CPNE8
ST8SIA6
GAS2L3
TAF1C
PWWP2B
G3BP2
GPRC5A
ACVR1
BMP10
TMPRSS11F
WIPI1
SLC7A6
RARS1
TAF6
CNPY4
ZNF343
SNX27
SHPK
CTNS
HMOX1
GNGT1
GNG11
TRIM5
TRIM22
LNX1
LOC105378979
TSPAN10
NPLOC4
GIPC1
CDS1
KLF6
YWHAE
ALG10B
RBFOX2
DENND1C
CRB3
DLC1
TP73
ANO6
TMEM88B
ANKRD65
TNS3
AFF1
CITED4
KRT7
PLEC
MRPL58
GABARAPL1
ELF5
CTNNAL1
ZG16
ADAM18
NODAL
MRPS23
INSL4
TMEM107
KLHL5
TIPIN
C1GALT1
CCIN
PRPS1
UBE2H
FOLR3
FKBP1A
GABRR3
C6orf132
CST4
SCNN1A
LTBR
LDLRAD2
EID2B
EID2
PET117
KAT14
PLAC8
CYLC1
AKNAD1
SNX29
UBE4B
ZNF106
SNAP23
SLC7A8
FHDC1
RNASE7
RNASE13
IFNL3
CDC14B
KALRN
ILF3
MRPL17
NTAN1
CMTM3
CCDC88C
SLC7A11
CD55
PSG2
TSTD1
TM4SF18
AMN1
DNAJC21
DUSP21
LIFR
RTN4
AP2S1
ARHGAP35
TBX2
BAX
SOWAHC
SEPTIN10
UBL3
KEL
CCDC68
PTPN3
SEC11A
FGD4
AFF4
ATG9B
ABCB8
CARD17
TACC1
RHOH
PHF6
SHC1
CKS1B
HEXB
VIT
KIFC3
CD2AP
LOC388282
POLD4
LOC389199
AFAP1
SEH1L
FUT3
ING2
ZNF341
PXMP4
SPG7
ARHGEF10L
CHMP5
BAG1
TMEM254
TMCC3
AMOTL2
SETD4
CBR1
DGKD
ACER2
TTLL4
SUPT7L
SLC4A1AP
SETD1A
ORAI3
TRABD2A
CORO2A
ZNRF3
FAH
PCNA
CDS2
TNIP3
MITF
ASPSCR1
SLC23A2
DGKZ
GGCT
KIF22
MAVS
EHHADH
TIMELESS
DUS2
DDX28
SLC45A4
FBXW8
UTRN
MAB21L4
CROCC2
EHD4
SLC6A2
CXXC5
SLC39A14
RHEX
KRTAP9-1
KRTAP4-2
KRTAP4-1
DLG2
KRT71
TCN1
CMC2
PTPRF
PKD1L2
C12orf66
ERRFI1
DNAJB13
ANP32C
KLHL11
CARHSP1
TRMT9B
ZNF749
SLC44A1
BAHCC1
MRPL23
ANKUB1
TRIM17
H3-4
ANOS1
TNFAIP1
IFT20
ZNF674
MIDEAS
MIGA1
TACC2
MTUS1
CLUL1
CETN1
ITIH5
MORC4
OLFML1
GAPDH
OR5H14
RFLNA
ZFPM1
XAGE3
PRPS1L1
PLPP3
CD177
NEBL
QPCT
ATP6AP2
RALBP1
ADGRF5
LTA4H
CREB1
GM2A
LMOD2
CALHM4
CSRNP2
WNT6
TNRC18
PMEL
CTR9
SH2D4A
PPFIBP2
TRIM33
GLYAT
PEF1
SPTAN1
PDSS2
ZBTB12
EHMT2
C2
PAK6
HOGA1
ANKRD2
REEP3
JMJD1C
EGFR
IDNK
AMZ1
SGK3
CDK19
AMD1
IFFO2
KPNA3
TTR
NEK6
C9orf40
CXCL2
HOATZ
BTG4
RPS14
BNC1
TAP1
PSMB9
SALL4
ARHGAP45
KLF7
FRY
KIT
CCDC153
CBL
CRISP3
HSPB3
TSPAN9
PLEKHM2
SEZ6
AP5B1
GSTT4
CABIN1
FAM107B
OVOL1
ZNF641
HACD2
NDUFB5
MRPL47
BAZ1B
OSBPL8
TXK
CARS1
CDK3
TBC1D14
C20orf203
TMCO6
NDUFA2
IK
CD14
MCCC2
SIX1
MYCN
DEK
INTS2
SCAMP4
ADAT3
WASHC3
OSBP
IBTK
LSMEM1
NHSL1
GOLGA5
KRT18
ODAM
TUBG2
IGFL4
SLC25A26
KTN1
PICALM
LGR6
RGL1
ARPC5
MED15
CMTR2
CSGALNACT1
CLPB
CNNM3
ZNF319
USB1
AXL
RLBP1
TSHB
SPTLC2
UIMC1
YIPF6
TAS2R14
UCMA
STS
RBM47
TPGS1
GRAMD1B
SYT12
KDM2B
RHOB
SPHK1
C6orf163
GPR78
BIN1
SEPTIN3
GMFB
POU5F1
AZIN1
TBC1D12
RAB44
GDF3
DPPA3
MYBBP1A
GGT6
ERAP1
ADGRG1
ID3
LHX4
DAW1
BCAR3
APP
KMT5C
PRDX3
SHISAL2B
ST3GAL6
TTLL1
CYP3A7-CYP3A51P
CYP3A7
TRNP1
OXGR1
NKX2-3
CTNND1
SELENOH
HCAR1
SH2D1B
CAMK2G
SLC29A1
MYMX
TNF
LTB
LTA
LST1
CNDP1
CS
JUN
KISS1
SPOUT1
KYAT1
RAD23B
MSX2
ANKRD31
SLC4A8
GALNT6
APOBEC3B
IDS
FAM83A
POLB
NCBP3
PCDH15
TMEM82
SLC25A34
STON1-GTF2A1L
SLC52A3
PTPRD
TMPRSS13
UBALD2
RTN2
PPM1N
ZBTB2
CRISP1
PDE4DIP
KMT2E
PTPN1
EIF2AK4
TET3
TBL1X
LIPC
CLCN5
CGN
XBP1
ZNF398
APBB1IP
RAPGEF1
ZNF697
PDS5A
IGFL2
ZBTB4
SLC35G6
POLR2A
RBM15
ACOT6
ART4
MED16
TBC1D1
PTCRA
CNPY3
RTL8C
RTL8B
MICAL3
MGLL
RGMA
NFIL3
XCR1
ZNF143
MEF2D
TMEM259
CNN2
CCAR2
C8orf58
ABCG1
RABGAP1L
HSPB8
HAVCR2
TMEM131L
FHL2
WWOX
CXCR6
PHLDB3
TRPV2
SENP5
RASSF2
USO1
TTC8
HSPB7
CLCNKA
ANGPT4
IL34
SHANK2
TENM3
THAP3
PHF13
LPCAT4
PXMP2
POLE
APOL6
SMPDL3B
TIAM2
EPB41L1
TYW3
CRYZ
MRAS
TEX46
TFE3
SORT1
PPP1R11
POLR1H
PFKP
TRIML1
FMN1
NKX6-3
ANK1
RNF19A
SELENOT
SMIM15
ATE1
SASH1
FERMT1
OTUD7B
KIF3B
ATP13A2
PPP1R15B
ACTN4
ANXA4
AAK1
DOCK5
CALD1
SLC43A2
SPNS3
TYRO3
SPRED2
DIP2C
FZD6
ZNF853
SNX6
MTMR11
LAMB2
GPR82
RPF1
TMEM270
ROPN1L
NAGK
EHBP1
NCOA1
LOC105370980
MFSD2B
IL23R
EAPP
C1orf159
KCNJ15
SH3GL3
AIG1
AHCYL1
CFAP92
TOMM34
SH2D7
GGTLC3
SERP2
SLC7A10
NUP50
FOXE3
ZNF624
PRDM2
SNAI1
AKAP13
CCDC183
ZNF367
MB21D2
TALDO1
KIF25
MGAT4A
NFX1
ARID5B
ZAP70
SYNE3
GLRX5
MYO10
ELF3
ANXA3
MBOAT2
MYO1B
TSKS
AP2A1
ITPK1
ARHGAP17
PIAS4
ASB4
CERS4
PHF20
ATMIN
COL7A1
TNRC6A
SH2D5
A4GALT
HPDL
YPEL3
GDPD3
NEURL3
CALML5
PRSS8
ALDH4A1
MYO18A
BRD3
PALLD
MREG
ULK2
CEP85
CLIP4
RIOK2
TSPAN15
SLC7A9
LPP
AMHR2
NDUFA4
ACER3
PPP2R3A
TYMP
SCO2
ODF3B
KLF2
PDCD1LG2
DCANP1
WWC3
FAR2
VOPP1
TMEM134
CABP4
UNKL
TPST2
TMEM41B
C9orf131
TNFSF8
PERP
SELENOI
ADGRF3
TNFAIP8
MINDY3
SIRT4
TFF1
MTERF4
NCOA3
TAF12
METTL27
PLEKHM3
SLC7A2
SLMAP