ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6784056 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX10399318: Breast epithelium

◢ SRX10399319: Breast epithelium

◢ SRX10977194: Hep G2

◢ SRX10977195: Hep G2

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◣ SRX6784056: K-562

◢ SRX6784057: K-562

◢ SRX7642859: Mammary epithelial cells

◢ SRX7642860: Mammary epithelial cells

◢ RBM39: STRING

WDR74
MTRNR2L2
MSH3
DHFR
POLDIP3
MTRNR2L1
CCDC200
PMF1-BGLAP
PMF1
MAMDC2
H4C14
UNC45B
H4C11
MTRNR2L8
MTRNR2L9
H4C2
H3C2
H2AC4
TOP3B
ADARB1
H4C15
DMAP1
MBLAC1
SNX16
SRSF3
FRG2C
H1-2
NPAS4
KMT2E
PRAME
H2BC8
H2AC8
SIRT4
PTPN6
C12orf57
RGPD2
RGPD1
HSPA1B
KLHL22
PRDX1
CRKL
FRG2
POLR3E
TRIM48
H4C3
H1-6
GBA
TMEM167B
H2BC11
H2AC11
RPS12
CCNI
CALM2
TMEM242
SLC25A51
NGB
DUX4
H4C5
COL23A1
H4C12
EIF4A2
VPS52
RPS18
B3GALT4
H3C12
H2BC17
H2AC17
PPP6R3
PAFAH2
METTL25
CCDC59
FAM98B
H2BC12
H2AC12
EEF1A1
TMC4
MUC3A
MTRNR2L10
EXOC2
INTS12
GSTCD
TUBA1B
TNPO3
TMEM107
PPP1R10
MRPS18B
SRSF7
H4C8
LUC7L2
SLC24A1
USP30
ZC3H10
RPL41
RPS20
PHF19
SLITRK3
PAXBP1
METAP1D
WDR36
SNRPB2
MAT2A
SNRPE
LIN28A
HSP90AB1
RBBP5
CCDC125
TNFRSF21
MKRN3
LTA4H
ZBTB37
H2BC21
H2AC21
H2AC20
BRD2
H2BC4
H2AC6
SF3A3
PUM1
GPN3
FAM216A
RBSN
NUF2
NBPF1
BMS1
MRPS15
STX10
IER2
PLEKHM3
H2BS1
RAP1GAP
SDF2L1
EIF1
H2BC5
H1-4
MED23
UBE2L3
POLR2J3
TTC26
RPS15A
TAF1D
C11orf54
ZNF391
POLR3B
ZBTB4
SLC35G6
POLR2A
CYCS
INTS6
RRP15
EIF2B3
RBM28
RPL12
LRSAM1
PPIL2
KNL1
FMC1-LUC7L2
FMC1
SMG7
GTF2IRD2
GTF2IRD2B
RPS3
TRIM7
UBE2D3
SREK1IP1
CWC27
BCR
CTNNB1
ZSCAN12
KLHDC10
H3C15
H3C14
H2AC19
H2AC18
SUPT7L
SLC4A1AP
STAT3
TMEM101
SNRNP35
RPL5
NME1
NUP214
DRG2
RPL38
ZDHHC8
PBLD
HNRNPH3
SSBP1
TOR1AIP2
TOR1AIP1
SEC22B
NASP
NECAP2
H4C9
STX16
GTF2H2
RPL10
P4HA1
KDM8
EIF4G2
YTHDF2
ZNFX1
KANSL2
H2AZ1
DNAJB14
SLC9A1
RIF1
TJP3
TIMM17A
SPATC1L
TMEM209
SSMEM1
ING3
H3C4
H2BC7
H2AC7
NDUFS7
HSPA1L
HSPA1A
ITPR1
RTL10
GNB1L
YDJC
CCDC116
GINS3
NSUN4
RPL36A-HNRNPH2
RPL36A
BTK
EIF4B
ZC3HC1
ZMPSTE24
TMEM259
CNN2
FUS
IER5
GTF2H4
TIPARP
EPB41
RPL15
NKIRAS1
PSMD3
RPL32
ATXN7L2
C11orf49
TUBA1C
ZNF253
BRMS1
B4GAT1
TMEM238
RPL28
EIF1AD
BANF1
H2AC16
H1-5
H3C11
TRIP4
NABP1
SUGCT
MPLKIP
HTR5A
NUFIP2
SHF
PSMD5
MAN2C1
RPS8
FTL
RPS27
RAB13
ZNF165
METTL8
DCAF17
MRPL40
HIRA
TPR
ODR4
C2CD5
RPS4X
ATF4
EIF2D
TEFM
DCT
TRUB2
COQ4
CLTC
DYNC2I1
C8orf37
RPLP1
RPS7
MTF2
SLC30A6
ZCWPW1
MEPCE
ACBD6
DHH
FAM133B
ARL15
DCLRE1B
AP4B1
NEK2
RPLP0
NFKBIL1
ATP6V1G2
DDX39B
JPT1
SON
GART
CRCP
PARK7
RFXANK
BORCS8-MEF2B
BORCS8
THAP7
NACA
PLXDC1
ZKSCAN8
POLG
H4C4
H4C1
H3C1
H1-1
PPIH
PVRIG
THADA
AURKAIP1
NFYC
GMNN
SPOCD1
MRPL1
PEX3
ADAT2
RTN4
FZD1
RPS26
ALKBH3
ITGB3BP
EFCAB7
BTG1
RINT1
NDUFC2-KCTD14
NDUFC2
MRPS23
EGR1
RPL37
MRPS31
ASH1L
TRAF7
SFPQ
NUP205
PCLAF
DCPS
RPL22L1
PPP5D1
CALM3
JMJD1C
PSME3
RPL11
DDX1
HMGB2
STX18
WBP1
INO80B
MDGA1
TEX9
RFX7
PSMD14
ZNF92
RAD54B
CSKMT
C11orf98
YWHAE
RPL6
MAP3K7CL
CCT8
LZTR1
H2BC15
H2AC15
DDX3X
CA8
MED15
H3-3B
SLC1A5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CNOT3
NSFL1C
ABCC6
IQSEC3
SRSF6
MRPL44
UNK
KANSL3
FER1L5
IPO4
PSMF1
CPPED1
PALB2
DCTN5
NOTCH2
PDE6D
COPS7B
OR2T1
SRSF2
MFSD11
UBC
FAM53C
CDC25C
AAR2
ZC3H6
NXF1
METTL9
CBWD5
CBWD3
MTIF2
DHRS2
CCDC88A
CBWD6
PRMT5
GTF2H2C_2
GTF2H2C
SLC39A3
SCFD1
RPSA
SCAND1
ENOSF1
ZNF76
RABGGTA
H3C10
MTERF4
PET117
PCK2
NRL
KAT14
MARCHF7
WTAP
SOD2
E2F6
HERPUD1
RBM39
DCAF10
C1orf198
ZCCHC4
HSPA5
FRA10AC1
MRPL39
HNRNPA2B1
H2AX
CBX3
H2BC14
H2AC14
ACYP2
H2BC13
H2AC13
SCGB1C2
SCGB1C1
DPY19L4
SLC35C2
GTF2A1
MTHFD2
ARL6IP1
TMEM230
TMEM41A
YARS1
S100PBP
SNRPB
GTF3C3
NUBP1
RPS23
ATP6AP1L
TACO1
SMARCD2
RPS2
RNF151
HSPE1-MOB4
HSPE1
HSPD1
MDP1
CHMP4A
MANBAL
SCML1
TTPAL
ATF7IP2
TATDN3
NSL1
RWDD1
RAF1
DTD2
ZCCHC3
HEATR5A
CDK5RAP1
OXA1L
TIGD1
RPL23A
RAB34
EIF4E2
TTI1
RPRD1B
ZKSCAN2
DDX5
CEP95
NANP
RPS16
KIF16B
RGPD8
RGPD6
RGPD5
C14orf93
RPL37A
ACTB
PTCD1
CPSF4
UBE2F
GTF2B
SLC25A21
MRPL3
FAM227B
DTWD1
INO80C
COMMD1
CCT4
ATR
TRPC4AP
C12orf73
TSGA10
HECTD1
PPP4R3B
RPL23
GSTA4
CCNL1
CCNC
SLC39A10
MTMR2
RPL10A
RMDN2
KMT2D
TRIM25
PDE11A
C6orf62
SRCAP
RUSF1
LOC730183
MCL1
C6orf226
MOB4
EIF4A3
UBE2S
TBC1D19
RPL19
CACNB1
KPNB1
GDAP1
HNRNPAB
VAMP4
H3C13
H2BC18
AJUBA
CCDC97
ZNF384
SRSF11
ZNF609
RPL31
ANKRD36C
HNRNPH1
ATXN2L
RPL3
SNAPC5
SEC14L1
ASXL1
SURF6
ATF3
ARHGEF12
MIA2
LDHA
UBFD1
TOB1
SMIM12
EARS2
TMEM18
AP1G2
UBOX5
STX6
PIP4K2B
FASTKD5
ZNF337
SECISBP2L
LRRC59
DGUOK
PPP1R3E
NCOA7
FOS
BCL2L2-PABPN1
BCL2L2
WDR11
ERCC6L2
TOB2
GLUL
INO80D
MRPS33
SEC13
GOSR2
CTR9
STMN3
RTEL1
TTC4
TUBGCP3
SLX4IP
MKKS
KIAA1586
PLK1
DARS1
ACIN1
PRADC1
CCT7
EDC4
MRPL16
SRSF1
PABPC1
NBN
PCIF1
WDR31
ALG1
ANKRD36B
RNF6
LRRC37A3
GDF15
RAB37
RPN2
MROH8
MECOM
HAUS4
U2SURP
SYT7
ZNF219
TMEM253
DHRS4L1
GTPBP10
GABPB1
CHGB
CEBPE
C2orf88
ZSCAN30
ANKRD36
DHRS4L2
TINF2
SLC44A1
SKP1
PSMA6
WASHC1
TAF15
MRPL58
USPL1
TMEM267
SYS1
HMGB1
DNAJA1
APTX
EIF2S2
AARS2
RPS3A
NDE1
MARF1
SMARCE1
DCP1A
GCLC
THOC1
PGBD1
HINT3
EXOSC6
ARL14EP
IRF9
CSNK2A1
RBBP6
NCOA3
HUS1
ALG10
C14orf119
UGP2
DHRS4
CBWD1
THUMPD1
PCBP2
TRA2B
C17orf75
ANKRD46
DDX19B
CCN2
AARS1
SAR1B
DCAF11
REXO5
ERI2
SNX5
MGME1
PPP2CB
HDAC4
C10orf88
BRWD1
ATP5MC2
SLC16A1
RBM45
NOMO2
XRN2
CFL2
CZIB
RBL1
TUBB4B
PKP4
CCDC148
TRMT11
SF3B6
FAM228B
VTA1
NMBR
PRORP
PPP2R3C
PIGBOS1
PIGB
PDRG1
STAT1
NAGK
PARPBP
NUP37
COQ7
CITED2
CIRBP
SLC9A8
PPIA
NFE2L2
NPM1
ZNF451
PCTP
HNRNPC
CSTF1
AURKA
TMEM216
DIDO1
IMPDH2
C19orf48
VRK2
STXBP4
COX11
SPHK2
RTN4RL1
RPL18
FAM83E
DPH1
VPS16
RDH14
PCED1A
TSC1
PSMC5
GFI1B
FTSJ3
STAM2
ACVR1
RAD54L
PBK
NOMO3
TAF3
NEU1
GORASP2
AGK
MYL12A
ISOC1
MTX2
TBP
PSMB1
SEC23A
ZFP64
TPK1
SULT1A4
SULT1A3
SLX1B
SLX1A
MTHFD2L
BOLA2B
BOLA2
OTUD7B
BOLA2-SMG1P6
UNC50
COA5
CDH24
OAZ1
NDUFB10
MRPL35
IMMT
ZC3H15
RTF2
REPS1
APBB2
SENP1
PFKM
NT5DC1
KAT7
IST1
HDDC2
TANK
MRPL21
MAIP1
MAGEF1
IGHMBP2
ERMARD
VWA8
THAP9
SEC31A
MEMO1
ZNF248
SLC38A2
RANBP9
DR1
TRDMT1
MIPOL1
LIMS1
BIRC6
SLC35B1
PRDM7
PELO
ITGA1
FAN1
CLK1
SDCBP
RBM34
FAM83D
EIF3C
AFF1
ZFHX2
THTPA
CRBN
TBPL1
MTERF1
DSTYK
ZSCAN9
MRPL52
SDR39U1
MAML3
TMEM254
KANSL1
COG2
MRTO4
EMC1
HEXIM1
DENR
CHMP3
TMBIM4
PTRHD1
NUDCD3
CENPO
SPAG11B
IARS1
HEXIM2
TFRC
SUPT3H
SREK1
SGF29
PARP2
NCL
MMADHC
KAT6A
OLA1
NXT1
UCKL1
EAPP
NUDT4B
NUDT4
DUSP1
CHD2
CASC3
AGL
RNPS1
RBBP9
TEX14
STAMBP
SRP54
RAD51C
ITGAV
ZFP1
TRIP12
GFOD2
FBXO36
AHCY
RPS10-NUDT3
RPS10
MICU2
ARID1A
PTP4A1
CHD8
PNN
CHEK1
CFAP20
TMEM94
G2E3
RRN3
JRKL
CCDC82
PKIG
MFF
GGA2
RPL17-C18orf32
RPL17
KPNA2
ID1
C18orf32
XKR7
WDR43
NOMO1
MST1
INTS2
E2F3
CUL7
ADRA1D
PRICKLE4
FRS3
DDX18
RAD54L2
APOB
SLC20A1
PYROXD1
PHIP
NOP56
DDAH2
POMZP3
LMAN1
NOL10
KMT2A
FUT10
CCAR2
C8orf58
ZSCAN31
SLC3A2
RNF103-CHMP3
RMND5A
REV3L
ADPGK
PPP1R11
MTLN
CUL9
TMEM222
RALGAPA1
MRPS11
MRPL46
FERMT1
PCF11
WFDC3
UTP4
TM9SF1
DNTTIP1
DERPC
CMTR2
CHTF8
SLC12A5
CCDC115
ERGIC3
BNIP1
RGL2
KAT8
TUFT1
TMEM170A
SNX11
LATS1
RAB5IF
PUS10
PEX13
NR1H3
ADI1
ACP2
MAPK1IP1L
CHMP7
PSMD7
BCAS4
GCFC2
DYNLRB1
TMA16
MRPS35
LSR
LINC02210-CRHR1
FN1
TRAPPC6B
KDM3A
IER3
FLOT1
TEP1
NDUFS3
NAA20
KBTBD4
TGOLN2
EEF2K
CDC7
ZNF184
TBC1D5
RSPH3
RNF146
ATP5F1E
USP40
C5orf24
SEC62
POLR2C
ZNF518A
WWOX
POLR3D
NPIPB9