ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708037 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX10399318: Breast epithelium

◢ SRX10399319: Breast epithelium

◢ SRX10977194: Hep G2

◢ SRX10977195: Hep G2

◣ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ SRX6784056: K-562

◢ SRX6784057: K-562

◢ SRX7642859: Mammary epithelial cells

◢ SRX7642860: Mammary epithelial cells

◢ RBM39: STRING

H2BC12
H2AC12
SNRPB2
H2BC11
H2AC11
PMF1-BGLAP
PMF1
H4C2
H3C2
H2AC4
H4C11
SPATC1L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H2BC21
H2AC21
H2AC20
H4C12
FRG2
FRG2C
H3C12
H2BC17
H2AC17
NSFL1C
IQSEC3
EXOC2
PEX3
ADAT2
ABCC6
EIF1
H3-3B
UNK
SRSF6
H2BC5
H1-4
PRDX1
STX16
RPS12
CNOT3
MRPL44
WDR74
MED23
TMEM242
POLR3E
PSMD3
UBC
PSMF1
H4C14
H4C15
FAM53C
CDC25C
FUS
SRSF2
MFSD11
H3C15
H3C14
H2AC19
H2AC18
NOTCH2
RPS20
GTF2H2C_2
GTF2H2C
ZC3H6
METTL9
KANSL3
FER1L5
PDE6D
COPS7B
HERPUD1
MAT2A
PALB2
DCTN5
IPO4
CPPED1
GTF2H2
EEF1A1
SNX16
DHRS2
ENOSF1
CTNNB1
NXF1
MTRNR2L8
RABGGTA
CBWD5
CBWD3
SRSF7
MTERF4
UNC45B
DDX1
HSPA5
NPAS4
PCK2
NRL
RPSA
CCDC200
SCFD1
PET117
KAT14
MARCHF7
SLC9A1
CCDC88A
H1-2
H3C10
H2BC14
H2AC14
MTIF2
H2AX
ZSCAN12
RPS15A
AAR2
RPL5
NGB
PRMT5
TRIP4
H3C4
H2BC7
H2AC7
ACTB
CBWD6
SLC39A3
BRD2
SCAND1
CLTC
CALM2
STX18
P4HA1
ATF4
RBM39
H2BC13
H2AC13
TMEM230
GTF3C3
ZNF76
DCAF10
NME1
RPS2
RNF151
NDUFB10
EIF2D
SLC35C2
RBSN
DPY19L4
KIF16B
HNRNPA2B1
CBX3
ATF7IP2
MRPL39
JPT1
RPLP1
NUBP1
WTAP
SOD2
MTHFD2
HSPA1B
TRIM25
RPLP0
TMEM41A
HSPE1-MOB4
HSPE1
HSPD1
MTF2
PLEKHM3
METTL25
CCDC59
GTF2A1
DDX5
CEP95
MTRNR2L9
RWDD1
SLC39A10
SNRPB
TTPAL
NABP1
RPS16
E2F6
OXA1L
EIF4A3
SCGB1C2
SCGB1C1
DTD2
ARL6IP1
ANKRD36C
FRA10AC1
RPS23
ATP6AP1L
TIGD1
EIF4E2
ZCCHC4
HEATR5A
POLR2J3
MDP1
CHMP4A
TSGA10
UBE2S
MTRNR2L1
CDK5RAP1
RPS3
MANBAL
ACYP2
SMARCD2
ATF3
TTI1
RPRD1B
RPL37A
TOB1
TRPC4AP
H3C13
H2BC18
SRCAP
LOC730183
FAM227B
DTWD1
OR2T1
C1orf198
RGPD8
RGPD6
RGPD5
MCL1
DMAP1
MRPL3
ARHGEF12
SLC24A1
NANP
HNRNPAB
RAF1
SLC25A21
CCNL1
ZCCHC3
KDM8
MRPS23
YARS1
S100PBP
ZKSCAN2
PPP4R3B
RPL3
GOSR2
H2BC15
H2AC15
IER5
CCNI
NUF2
C14orf93
LDHA
PTCD1
CPSF4
UBE2F
RMDN2
RUSF1
GABPB1
MTRNR2L2
MSH3
DHFR
SLC16A1
NOMO2
COMMD1
CCT4
LRRC59
ZNF337
TOB2
ZNF609
TMEM18
KIAA1586
TAF15
C19orf48
RPL10A
ASXL1
C6orf226
H2BC4
H2AC6
UBOX5
FASTKD5
ANKRD36B
ZBTB4
SLC35G6
POLR2A
OAZ1
ZNF384
DNAJA1
APTX
GTF2B
CHGB
C6orf62
TOP3B
SRSF3
EDC4
ATR
RPL23
EIF2S2
SKP1
GCLC
RAB37
CIRBP
RPL23A
RAB34
HNRNPH1
MOB4
PIP4K2B
INO80D
DARS1
CCDC97
PABPC1
DHRS4L2
ARL14EP
TTC4
CBWD1
TATDN3
NSL1
SMARCE1
THUMPD1
BMS1
SURF6
NDE1
MARF1
SNX5
MGME1
SPHK2
RPL18
FAM83E
ALKBH3
MRPS31
METTL8
DCAF17
FAM234B
EGR1
CSKMT
C11orf98
ANKRD46
PDE11A
SEC13
ACIN1
UGP2
HECTD1
C2orf88
TNFRSF21
CCNC
PLK1
MRPL58
CCN2
PSMC5
FTSJ3
ATXN2L
AP1G2
ALG1
PRORP
PPP2R3C
CYCS
RPL37
ALG10
DCAF11
TACO1
SCML1
TAF1D
C11orf54
CTR9
NOMO3
SRSF11
WDR11
ACVR1
PBLD
HNRNPH3
PSMA6
RBBP6
MAGEF1
NDUFS7
MAN2C1
PPP1R3E
BCL2L2-PABPN1
BCL2L2
TUBGCP3
SLX4IP
MKKS
DCP1A
MIA2
PDRG1
TRDMT1
DGUOK
FOS
ANKRD36
XRN2
SEC14L1
WDR31
REPS1
CRBN
ARL15
SMIM12
CLK1
VPS16
PCED1A
RPN2
MROH8
TEFM
IRF9
COQ7
AGK
STAT3
KMT2D
NBN
UBFD1
EARS2
CZIB
MTMR2
AJUBA
GORASP2
SLC38A2
SNAPC5
HAUS4
PARPBP
NUP37
CSNK2A1
RANBP9
PTP4A1
TUBA1B
NDUFC2-KCTD14
NDUFC2
RDH14
SENP1
PFKM
GSTA4
PCIF1
NAGK
POMZP3
NUP214
C12orf73
DHRS4L1
MTX2
FAM83D
ZNF219
TMEM253
RPS3A
MYL12A
IQUB
WASHC1
SDCBP
MRTO4
EMC1
TMEM94
SLC3A2
HSP90AA1
VAMP4
LRRC37A3
NCOA3
HUS1
CFL2
JRKL
CCDC82
PSMD14
EXOSC6
FAM98B
TBC1D19
KPNB1
STAT1
DIDO1
SEC23A
KANSL1
MFF
INO80C
TINF2
MRPL35
IMMT
SUPT3H
STAMBP
PTPN2
STAM2
ISOC1
NT5DC1
RIF1
RPL19
CACNB1
MRPL16
OTUD7B
ZSCAN9
PYROXD1
PGBD1
CSTF1
AURKA
PBK
VWA8
RBM34
NXT1
GDAP1
SECISBP2L
NCOA7
NUDCD3
SLC20A1
ZNF391
ZNF451
PCTP
IMPDH2
MAIP1
ZNF248
KPNA2
HSPA9
GLUL
STMN3
RTEL1
CASC3
KAT7
CHMP3
RPL31
SRSF1
TRA2B
TRMT11
ADI1
C2CD5
SLC44A1
C14orf119
RBL1
VRK2
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
RRN3
PHIP
TBC1D5
PPIA
EIF3C
FN1
YDJC
CCDC116
AARS2
GFOD2
PRICKLE4
FRS3
RNF103-CHMP3
RMND5A
MYLIP
HSP90AB1
NEU1
TPK1
NCL
XPOT
CEBPE
MAML3
LINC02210-CRHR1
POLR2C
PTPN4
PKP4
CCDC148
TBP
PSMB1
APBB2
PELO
ITGA1
NUDT4B
NUDT4
AGL
TEX14
RAD51C
POLR2J2
STX6
SYS1
TAF3
ZFHX2
THTPA
COG2
CMTR2
TOX4
RAB2B
RPL27A
DHRS4
PCBP2
PIGBOS1
PIGB
KAT6A
MRPS11
MRPL46
RPS8
ATP5MC2
HEXIM2
MRPS33
TUBB4B
STXBP4
COX11
RTN4RL1
DPH1
CUL7
RNF146
RBM28
CDH24
RNPS1
ADRA1D
TTC21B
DDIT4
INTS12
GSTCD
TMEM267
HDAC4
MTHFD2L
SDR39U1
PTRHD1
CENPO
RAD54L2
PPP1R11
RALGAPA1
H4C5
PRADC1
CCT7
THOC1
IST1
DENR
ZFP1
MICU2
AURKAIP1
USPL1
HMGB1
SF3B6
FAM228B
LIMS1
TBPL1
TUFT1
PRKAG1
SYT7
GTPBP10
SRP54
ID1
WDR43
NOP56
HDDC2
TMEM254
ITGAV
ANKRD17
KDM3B
UTP4
DERPC
CHTF8
DDX19B
AARS1
SREK1
CCNG1
RBMXL1
KYAT3
H2BC8
H2AC8
U2SURP
ZSCAN30
HINT3
NOMO1
LMAN1
FERMT1
AGFG1
ERCC6L2
RBM45
ADPGK
SCARB1
HNRNPC
MIPOL1
NOL10
PHF3
PPP2CB
RTF2
RPL17-C18orf32
RPL17
C18orf32
C5orf24
HOMEZ
GBE1
DR1
GGA2
SESN2
AFF1
MRPL52
CHD8
CDC7
ATP5F1E
TMEM177
WIPF2
TMEM186
PMM2
PFDN4
DDX59
TEX10
ASNS
NBPF1
DUSP1
NPIPB9
ANKRD40
SNX17
EIF2B4
SLC9A8
KMT2A
DYNLRB1
TDP2
ACOT13
MRPL40
HIRA
RNF6
NPM1
LANCL1
CPS1
SLC30A6
LZTR1
ZC3H15
GPN1
CCDC121
ZNF282
OMA1
DAB1
C17orf75
REXO5
ERI2
E2F3
CYLD
COQ8A
FAM133B
NFE2L2
SLC35B1
TFRC
PARP2
RBBP9
G2E3
CUL9
RAB5IF
GCFC2
RSPH3
ETV4
BRWD1
UNC50
COA5
TGOLN2
NDUFB2
RETSAT
ELMOD3
SRSF10
STX10
IER2
MRPS35
MRPS7
GGA3
ACTR3
EDEM2
ACSL3
SPAG11B
ERGIC3
SNX11
USP40
MRPL45
TIMMDC1
PIGU
RMI1
HNRNPK
VPS26C
CDK1
CITED2
PRKRA
PJVK
THUMPD2
GLS
MTLN
RPS6
EEF2
NARF
FTH1
CSRNP2
DNAJC9
RTN4
GDF15
VTA1
NMBR
ERMARD
PSMD7
DNAJC16
CASP9
VSNL1
CSE1L
MCM7
AP4M1
PNPO
TBC1D14
HMGCS1
RNF138
PARK7
C10orf88
SMIM8
RIPK1
EAPP
GZF1
BCKDHB
FGGY
TRIP12
FBXO36
TM9SF1
NAA20
SLC39A7
RXRB
HSD17B8
RBM12
CPNE1
ATP5MC3
MRPL27
EME1
NFAT5
ZNF24
TANK
IARS1
CHD2
SEC62
MSANTD2
TMEM14B
NUP62
IL4I1
ATF5
EPM2A
LSM8
SRP9
UBE2D3
EIF4G2
MEMO1
TMBIM4
SLC12A5
TEP1
TOP1
MAT2B
AP5S1
SDC4
TCAF1
FTCDNL1
SLC1A5
CFAP20
PCF11
TMEM170A
IER3
FLOT1
ZCCHC9
TRMT61B
RFX3
CHD9
GADD45A
LATS1
CYP20A1
ZNF468
AMACR
VCPKMT
FBXO34
KMT2E
NFYC
MTERF1
APOB
MAPK1IP1L
GOPC
SAYSD1
NEMP2
POFUT1
PLAGL2
TGM2
NCOA5
RPL29
BZW2
ANKMY2
THAP9
SEC31A
KAT8
ATAT1
NDUFV2
ZCCHC7
ERLEC1
ASB3
NFATC3
SRRM2
CRLS1
ID2
TMEM217
TBC1D22B
GTF2H4
MMADHC
PKIG
RPIA
SLC26A8
MAPK14
KRT8
KRT18
FUCA2
AGPS
TJAP1
SMC3
TMEM14A
CALU
ADARB1
SAR1B
FAN1
RPS10-NUDT3
RPS10
ZSCAN31
WFDC3
DNTTIP1
SKIV2L
NELFE
BRMS1L
SDHAF2
CPSF7
POLE4
SELENOT
ABCD3
CKAP2L
RRM2
GLO1
UPK3BL1
GAPDH
DCLRE1B
AP4B1
POLR3B
RABL2A
NDUFAB1
MATR3
TPD52L2
ABHD16B
ZFAND3
NKIRAS2
DNAJC7
PSD
FBXL15
BLOC1S6
FARSA
CALR
RAD54L
BCAS4
SNRNP200
TANGO6
SUV39H2
FAM177A1
ASCC1
ANAPC16
PTEN
KLLN
NPIPB6
SLC35B2
MLEC
RSPRY1
PSME3IP1
FRMD7
COL23A1
TEX9
RFX7
FBXW2
CPE
PMS1
ORMDL1
UBXN2B
ZNF524
FIZ1
BIRC6
PNN
TRAPPC6B
AMMECR1L
MED4
UBR2
TCTN3
LOC110384692
C4B
C4B_2
C4A
CNOT1
SMIM31
RPL12
LRSAM1
ITGB3BP
EFCAB7
SGF29
KCTD5
GINS1
SMIM26
RPL13
C6orf89
PPIL1
ALG10B
BCLAF1
YWHAG
TMEM167B
GSPT1
ICE2
FAM207A
THAP5
DNAJB9
MRPS14
SGCA
ZFP64
PRDM7
LSR
ZNF23
ADAM17
SCRN3
CIR1
STARD7
ZNF343
RGS9
SLC9A3R2
PIP4P2
ACTG1
GMNN
ZBTB9
NAE1
ERBIN
FRG1
ZNF181
CYP51A1
BECN1