ChIP-Atlas: Target genes

Potential target genes for SMAD9

Query protein: SMAD9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10475367 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD9's Target genes

◢ SMAD9: Average

◣ SRX10475367: Hep G2

◢ SRX10475368: Hep G2

◢ SMAD9: STRING

NPAS4
XKR7
IQSEC3
INSM2
HTR5A
NKX1-1
LIN28A
MTRNR2L1
FAM24A
FRG2C
MTRNR2L2
MSH3
DHFR
DUX4
WDR74
CPLX2
RAB37
CELSR3
CHGB
RANBP3
KCNH7
GLRA1
FRG2
SNAP25
MTRNR2L8
L1CAM
BARHL1
DLGAP3
CCDC200
EPHA10
MUC3A
SST
MAPK8IP2
RTBDN
SMIM17
LHFPL5
KDM3A
DNAJC6
CDIP1
HES3
LEMD3
PTPRS
N6AMT1
SLC7A6OS
PRMT7
SIGLEC10
CCDC92B
CCNL1
GCFC2
ENOSF1
ZPBP2
IKZF3
COL23A1
RNF130
MARCHF4
SLC12A5
CTDSPL
HES6
SSTR5
GDAP1L1
NPPB
VGF
CPQ
AATF
USP14
PIK3R3
EVI5
NTSR2
SRRM3
CYB5R4
HBQ1
HBA1
PTPRN
POLR2J3
H4C12
TRIM44
PMS2
AIMP2
WTAP
SOD2
FN3K
UNC80
KLF11
CHRM4
GTF3C3
SLC25A10
STX16
CEP295
EIF3B
RNF103-CHMP3
RMND5A
METTL15
KIF18A
CHGA
EPM2A
TASOR2
EXOSC6
GRM1
GJA10
NSUN5
OGDHL
CERS6
LMCD1
IPMK
CISD1
DDX1
ANKRD36
STK25
NRSN1
HDAC4
CHRNB2
ABCC6
ZFYVE27
SCRT2
DPY19L4
RAD50
NEUROD1
CNPY3
LTB4R
CIDEB
CDK5R2
STMN3
RTEL1
RABGGTA
LDAH
RFC1
HPCA
PPP1R3C
SLC39A3
MYT1
TCFL5
TIGD1
EIF4E2
CMTR2
SP5
PTMA
ANK1
AKAP10
PMVK
HECTD1
MFF
TENT4A
SF3A3
ACTL6B
AAR2
RBM39
PGBD5
KATNA1
SLC3A2
USP30
SVOP
SCGN
CNTRL
C5
UNG
TCAIM
SLC7A7
ALKBH2
UBE2Q1
DTD2
PPY
FAM177A1
DHX40
THUMPD3
LRRC59
AARS2
NOC3L
KAT5
HDAC2
LCLAT1
PLEKHM3
CYP21A2
FMNL3
ZNF286A
DIABLO
TM9SF1
ANKRD36C
AIP
SLC25A21
LUC7L
GID8
GET4
DIDO1
FANCL
PSMA1
PDE3B
RNF187
CCDC107
NR1D1
NANP
USP37
CNOT9
RMND1
ARMT1
TMEM181
SCAMP5
DNAJC11
OPRL1
LKAAEAR1
RBM28
STAT3
WDR36
SNRPB
ENO1
EBAG9
PTP4A2
INTS12
GSTCD
EFCAB13
SCAF11
C6orf136
TMEM186
PMM2
SOS1
SMC3
SAYSD1
DCLRE1C
MAP2K2
LRP6
VPS29
RAD9B
SUGCT
MPLKIP
IFNAR1
SPOP
PCDH8
DCP1A
LDHA
NUP62
IL4I1
ATF5
SPTSSA
NAA20
ADCY4
SCFD1
EIF4A3
CTF1
BCL7C
TSGA10
THNSL1
MAPK8
DHRS4L2
SPAG4
SCGB1D2
PC
NHLRC1
CTR9
HEATR5A
THUMPD2
POLE4
ZCCHC7
SUPT3H
HSPE1-MOB4
HSPE1
HSPD1
RPL31
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIP4
TMX3
CCDC102B
TMEM106B
OGFOD3
HEXD
FGFBP3
ODC1
NOL7
MTMR2
TRIM67
SLC9A1
RRP15
PEX3
NID1
GRIA2
ARL6IP1
ADAT2
E2F6
SNRPB2
PGRMC2
C7orf25
TOB1
MTERF4
DOCK6
TK2
CKLF-CMTM1
CKLF
C10orf88
IARS1
MSL2
ZNF501
VRK2
NUP160
CDC16
ELOVL3
ABCA3
LRP2BP
ANKRD37
TOLLIP
RXRA
PIKFYVE
PDE4C
NUBP1
NREP
RSPH3
GOPC
FAM98B
CABP7
MRPL44
ZFP1
WDR31
SRP54
CUL5
CDK5RAP1
FUS
URGCP
UBE2D4
OSBPL8
L2HGDH
HELB
GMCL1
DMAC2L
AKAP11
DNAJC10
TRIM8
SPHK1
ZMYND10
NPRL2
CYB561D2
HBS1L
MAT2A
CLVS1
LAMTOR5
NOP56
H4C14
RETSAT
PARD6A
MIPOL1
G2E3
FTCDNL1
ELMOD3
CHD9
C14orf119
ACIN1
ACD
ZKSCAN8
PMS1
ORMDL1
HAAO
CEP126
CBWD5
CBWD3
ATF7IP2
ANGPTL5
UTP11
SHOX2
RSRC1
C12orf66
MED31
C17orf100
KANSL3
FER1L5
DBI
C2orf76
ALCAM
H3-3B
ZSCAN9
MLLT1
DDX56
TOMM34
NOL10
RUNDC3A
MRPS35
LIMS1
SLBP
CCDC83
FAAP20
RBM45
PDE11A
TRMT6
PAQR4
MCM8
KREMEN2
KAAG1
DCDC2
COPS6
APMAP
AGPS
TASOR
MRPL39
MEIS1
CBWD6
NDUFAF5
ESF1
RBL1
UFSP1
SUGP2
PBLD
OXSM
NGLY1
MRPL16
HNRNPH3
GRM4
GOLGA8A
CDKN2AIPNL
ARMC6
ACHE
CEMIP
RANBP2
NBPF1
MRPL17
ZSWIM7
TTC19
TINF2
ROMO1
MRPL35
IMMT
EDRF1
CTNNA2
CRNKL1
CFAP61
OR2T1
MOB4
ACAD9
MTF2
H4C11
STT3B
COQ8A
CD274
ATR
RAD9A
ZNF219
OXA1L
ZNF2
TTI2
RNF103
POGK
NET1
ESAM
UBAP2L
C1orf43
SOGA3
NABP1
NME6
LACC1
CCDC122
LTV1
PIMREG
MPHOSPH10
MCEE
HNRNPH1
DTX2
BRMS1L
LOC112694756
ESCO1
TMEM18
RAB3GAP2
ASCC3
ANAPC10
ABCE1
RBM12
CPNE1
MORN2
DHX57
TRDMT1
PLIN5
LOC100287896
LIPT2
KHDRBS1
ELOVL1
PIGF
CRIPT
RPIA
PSMD7
PHF1
JRKL
HPS5
GTF2H1
COMMD1
CCT4
CCDC82
C16orf46
WDR43
PAAF1
ITGB3BP
GMNN
EFCAB7
DHRS2
COA4
SHQ1
SEC24A
RABL2B
PYGB
FBXO33
DHX35
CEBPZ
YDJC
XKR9
VTA1
TTLL4
TOP3B
TAB1
SOWAHC
SEPTIN10
SC5D
RPP38
NMBR
LACTB2
CTDP1
CCDC116
MRPL3
SCAPER
RAE1
SPATA5
NUDT6
IMPDH2
HNF4G
ATG7
MXD1
TTC26
THOC3
SPATA25
SLC38A1
RETREG2
NEURL2
METTL25
CTSA
CNPPD1
CCDC59
PCNA
TSEN54
CASKIN2
PSMF1
HNRNPC
EEF1AKMT1
H1-2
DCPS
ZNF202
RPL15
NKIRAS1
MVD
HSD17B1
CTNNB1
CD320
C2orf73
ARPP19
TUBA1B
SERF1B
SERF1A
PGP
OSGEP
BRICD5
APEX1
PSME3
ABCB6
VPS16
RPL5
RNMT
PCNX4
PCED1A
MIS18BP1
FAM210A
EPB41L4B
DCAF10
SRSF6
CRBN
THUMPD1
PCID2
MRPL27
MMAA
MARCHF8
LBP
GATAD2A
EME1
CUL4A
TSG101
SLC7A5
RNF146
PRPSAP1
PET117
NOP2
KAT14
HHIPL1
HEATR1
FBXL17
CLN5
CLK1
CCDC85C
MRPL21
IGHMBP2
UCKL1
STX18
SLC25A36
SEC61G
SDCBP
POLR1H
GOLGA5
CWC25
ZNF425
ZNF398
STARD7
FBXO4
EEF1AKMT2
DDX19B
CPNE4
CHFR
ATXN2L
ANKEF1
TBC1D19
PTDSS1
MTERF3
SRP19
MARCHF7
FANCD2
COG7
WDR48
WDR41
STIP1
SCN11A
RRN3
PPT1
NSRP1
NPM1
NHEJ1
KIZ
KIAA1958
EAPP
DUSP28
DCUN1D5
C9orf147
ANKMY1
HINFP
TTPAL
TRA2B
TOMM5
SLC37A4
PPME1
GAS2L3
CD302
C2CD3
HHATL
PROCR
TEX14
RAD51C
PTPRA
PPP4R3B
PHOSPHO2-KLHL23
PHOSPHO2
NFIX
HSD17B12
EIF4G2
DHRS4
CHEK1
CCDC173
TMEM223
TMEM179B
RAMAC
MOCS2
BMS1
AHI1
ACAP2
MIA2
PIK3IP1
TEX46
TBC1D15
KDM1A
HNRNPF
FRG1
USP40
RPL37A
COCH
USP47
TNXB
TNPO1
TMEM101
SPAAR
SF3B6
REXO2
MATN1
FAM228B
DUS1L
CENPA
C4B_2
C4B
TANK
THAP5
SPAG16
SNRPD1
RIF1
PSMD12
MLH1
MAIP1
GINS1
EPM2AIP1
DNAJB9
CCDC34
AKTIP
PRKDC
MCM4
ZER1
TTC30B
TBC1D32
SMIM26
SF3B5
NFU1
LSM12
G6PC3
DUS2
DDX28
CZIB
CEP192
H4C3
H1-6
IPO4
ZCCHC9
TOB2
TMEM116
SLX4IP
SLC25A28
SF3A2
SEH1L
PLEKHJ1
MKKS
L3HYPDH
JKAMP
ICE2
FBXO48
ERP29
CIAO3
C6orf62
ASNS
APLF
C15orf61
ATP5F1E
NAT10
STAU1
SFI1
SERINC3
RPS7
RPLP1
KLHL9
HUS1
EXD1
DDX27
CHP1
CAT
PHF3
SMPDL3A
NPIPB6
NCL
MGA
MAGOHB
GUSB
GPR6
CFDP1
ZFHX2
ZBED8
WASHC4
TIMM23
THTPA
SGF29
PPM1D
MBIP
FAAH
XRN2
PEDS1-UBE2V1
PEDS1
C14orf93
PPP1R3D
PLAA
OSGEPL1
METAP2
IFT88
IFT74
FAM217B
FAM149B1
ECD
RBM7
C11orf71
TGFBRAP1
ZBED9
UBE2E3
SEC31A
RALGAPA1
PRMT2
NCK1
CSE1L
IMMP1L
ELP4
SLC25A13
PLS1
NDUFA12
LRRC61
KRR1
KNOP1
JAM3
GOSR1
DBP
CHORDC1
CDCA7
ATP5MC2
ACTR3C
DHDDS
ANKRD36B
MRPL19
CPPED1
TAMM41
IDH3B
TUBGCP3
WDR89
GCA
GPN1
CCDC121
PRR3
GNL1
WDR35
TMA16
SCAND1
PUM2
MDP1
CHMP4A
ZNF451
TRAF6
SDHAF3
RIOK1
RAG1
PEBP1
FUT10
CAGE1
ANAPC1
ACYP2
VPS52
TTC17
TOP1
RPS18
PRPF38B
PPAT
PAICS
NAGK
FAN1
B3GALT4
PRRT2
MAZ
TRAPPC6B
PNN
TRAK2
TMEM230
TBRG4
STRADB
STK4
PABPN1
MTIF2
LYPLAL1
FEM1B
FAM162A
ERCC6
CCDC66
CCDC58
CBS
BTF3
ARHGAP5
ZC3H6
DDX18
ZNF337
ZNF214
TEFM
SPON2
SMG1
RPS3
RCCD1
RASSF1
NLRP14
H2AX
ERCC3
ATXN7L3B
ZNF706
UGGT2
TTC9C
SRSF2
SNAI1
SKA3
RPUSD4
RPL10A
POLR1B
MRPL57
MRPL40
MFSD11
METTL6
IRF9
HNRNPUL2
HIRA
FAM118B
EAF1
CBFA2T2
BLOC1S6
ABHD12
ZNF292
TRAPPC12
TEX10
RPS15
EIPR1
ARL14EP
NCOA3
UGP2
SLC25A46
PSMB5
PRORP
PPP2R3C
PIP4K2B
MSTO1
H3C12
H2BC17
H2AC17
CKAP5
TUBD1
SRPRB
SMARCAL1
RPS6KB1
RGPD8
RGPD6
RGPD5
PRMT5
NBN
MYO5C
MSANTD2
MRPS7
MRPS5
GGA3
DPY30
AP3S1
SDR39U1
MRRF
B3GAT3
PRKAR1A
OLA1
NUDCD2
KCTD5
HMMR
HM13
GOSR2
FAM133B
DNAJA2
TRMT61B
RIN1
RAB10
FAM174A
RPS6
PBX3
TOMM22
MYH7B
MRPL30
MITD1
IFT52
GSS
COQ5
APTX
NUDT17
MRPL53
MMUT
LTBR
LATS1
KPNA5
CENPQ
BBS5
ARL8B
AK2
POLR3E
TMEM107
SRSF7
SRSF1
SLC35A3
RFC5
PSTK
PRMT3
PCIF1
NFX1
MTG1
LRCH3
EIF2D
BORCS5
H4C2
H3C2
SLC35F2
PDE4DIP
CCDC88A
STK17B
H3C10
H2BC14
H2AC14
ATXN7L2
ATIC
TMEM248
RNF141
PSAP
PRDX1
KLF10
AMZ2
GEMIN2
SOS2
SNRPE