ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003071 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◣ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

PSG5
PLA2G4D
RBL2
ARHGAP5
PSG9
MTRNR2L8
PSG1
PSG11
MAMDC2
FRY
SLC5A10
PSG7
MTRNR2L2
MSH3
DHFR
SEC22B
AP3D1
CRPPA
RAB17
HSD17B4
ITGAM
PSG8
CCDC141
PIWIL3
MTDH
NIPSNAP1
ADAM17
PSG3
PPP1R14D
WWP1
ENTPD1
ZDHHC1
ANKRD23
C18orf21
IFNAR1
RNF43
PSG4
TMTC2
ADGRG3
FAM110A
PATJ
LRP2
EHF
TMEM52B
EXOSC2
YTHDF1
CDH1
DPEP2
LNX1
AMN1
PSPN
COLEC12
GSTO1
SLC10A6
BCL2L13
ATP6V1E1
KRTAP2-1
PXMP4
ATP2B1
ANKRD40CL
GTPBP4
ENPEP
CCDC200
PHLDB2
WDR74
MIS12
DERL2
NAGLU
WDR93
PEX11A
TET1
RABGGTB
RYK
RASA2
EID2
GEMIN2
ABLIM1
CDK19
AMD1
SLC7A6
SEMA6A
NTAN1
ZNF474
SH3YL1
ACP1
IL34
ACER3
CCDC81
ANKRD1
SLC7A9
COL23A1
SFXN5
LIMS4
UBE2J1
LIMS1
DNAJC15
SLCO2A1
SH2D4A
COMMD8
ZNF749
KIT
PKIB
BACE1
KRTAP3-1
OLFML1
MEST
HECTD1
MARVELD3
RARS1
PRKCZ
ID3
NKX2-3
FGD3
PSG2
TSPAN10
NPLOC4
DNAJC21
SLBP
DECR2
POU5F1
SLC19A3
SLC18A1
ZNF407
RGL1
ARPC5
EFNA1
SYBU
PTPN1
GABRR3
MGARP
FDFT1
SH3BP4
FEM1B
TTC23L
NSD3
OR10V1
CITED4
SLC15A2
ITGA2
OSBP
CTPS1
NIBAN2
PLAC8
SLC7A7
ZNF641
CXADR
GCM1
PRKRIP1
ATP13A2
C6orf163
GSTA4
MED15
ARHGEF10L
RALBP1
DUSP21
LDLR
OLR1
STARD8
CCR5
INSL4
C1QTNF6
ARHGEF18
HACD2
MRPL38
EPHB2
LYRM1
DCUN1D3
IKZF3
SLC20A2
DLG2
ADHFE1
P2RX6
USP6NL
TAF6
CNPY4
ZNF398
TMEM245
C6orf132
PELO
ITGA1
ZNF343
MTRNR2L9
IBTK
ZNF175
TMEM88B
ANKRD65
HERC4
PTTG1IP
KLHL5
ZNF592
SETD4
FBL
FAM89A
SPAM1
CXCL2
PKP2
PPY
RBM15
TSHB
HMOX1
SEH1L
ACVR1
HPDL
ULK2
FAP
STS
ZNF367
BIN1
DUX4
TPST2
ZBED1
DHRSX
LRRC14B
TRMT9B
VPS37C
LOC389199
AFAP1
SLC38A9
DGKD
SIX1
TMEM150A
CYB5A
PLD5
KEL
SNAP23
KRT71
IL1R1
UIMC1
OVOL2
LSM14A
FBRSL1
CDCA4
RBFOX2
POLD4
GHR
SLC1A5
CTNND1
SAA1
CMTR2
RNASE7
SLC17A5
RGPD2
RGPD1
CALML5
BNC1
LHX4
NUP153
GLB1
TMPPE
CHST6
SNX27
KDM5C
HOATZ
BTG4
ANXA3
SLC44A1
IQGAP2
PIP4P2
ADAP1
ANKRD2
TTC39C
PLAAT5
ZNF853
LETMD1
LIFR
AIF1L
CROCC2
SLC25A34
PSG6
MTF1
NR1D2
NKIRAS1
ZNF444
SLC25A13
VIT
LSMEM1
ST8SIA6
SYNPO
RHPN2
KLRC3
PIK3C2A
RTN4
CLMP
MYO6
CCKBR
SIX2
SAMD7
WIPF1
TXNRD1
KRAS
CTNNAL1
NBR1
CD55
ACER2
SUPT7L
SLC4A1AP
BRD4
ASPSCR1
TMEM41B
RAPGEF1
PRSS8
RIPOR2
MARCHF7
C1QBP
CYRIB
RASSF2
DAW1
SHANK2
TLK1
ERP27
MMP19
MIGA1
ACE2
TACC2
FUT3
RFLNA
DNASE1
CAMK2G
FRYL
PAK6
ARHGAP35
FREM2
NANOGNB
TSTD1
SVOPL
TRPM6
DCTD
LTA4H
LACTBL1
MUC3A
DNMT3A
SLC12A3
ARHGAP40
KRT19
SPR
DHX35
FMN1
NCOA1
OR2B11
SIRPA
KIFC3
MRAP2
ASPRV1
AIG1
ABLIM3
CMC2
FAM53B
NIT2
DOT1L
YY1
SPTLC2
ZNF358
ATR
HEATR4
EPOP
DPRX
LGR5
PLXNB2
NDST1
FRG2C
BAZ1B
IL22RA2
GGCT
DNM1L
HNRNPF
TMCC3
EMC2
JAM3
CBL
DEPP1
NAGK
GMFB
RBBP7
ZFPM1
PLEKHM2
CXCR6
CSF1R
SRI
CHRNA10
CLCN4
RPL26L1
TRIM17
H3-4
ZG16
CLTC
BABAM1
SPNS3
C1GALT1
TTC8
FBXO42
USP44
TNFAIP3
NRBP1
PORCN
EVPLL
SIK3
HMGCS1
PAPPA
KRT8
GRM4
USP11
STXBP6
TACC1
TENM3
CORO2A
SESTD1
CAPN5
NPL
TRIM22
TNFAIP8
TRIM45
PEX3
ADAT2
MYLK3
TTR
SEPTIN9
CSH2
FAR2
TTYH3
CYP1B1
BANK1
ATXN7L1
MRS2
MRPS23
SLC6A9
GM2A
CUL2
NR4A1
ITGB6
CNNM3
G3BP2
MCAM
FGF1
RHOV
MIDEAS
RABGAP1L
SIGLEC6
SLC35A2
TMEM212
NEK6
LDAH
ADGRF4
CLDN10
OSBPL8
MBOAT2
BCR
SLC45A4
ZNF552
KAT2B
TALDO1
RIPOR1
CALD1
NEDD9
PPARG
KIAA1586
ORAI3
MREG
EPS8
CDC14B
ZNF503
CXXC5
NFIL3
MAGI1
SYDE2
TMEM107
CCNL1
GPD1L
PACSIN2
HAPLN1
FCGR1A
ERGIC1
CITED2
LOC388282
PTGES
HK1
HSD17B1
SLC25A26
EIF3D
TRPM1
CREB1
BAIAP2
PCCB
SLC39A10
APBB1IP
TNRC6A
CMC1
TMEM254
MYBBP1A
GGT6
KTN1
OGDH
DEK
MTUS1
CD2AP
RTKN
PARP8
ANKRD33B
OR8S1
MTRNR2L1
FHDC1
ZNF76
SCARA3
MICB
HSPB2
CRYAB
PRORP
PPP2R3C
ATP6AP2
EPS15L1
ARID5B
CELA1
CSRNP2
LEPR
PARP4
NFYB
CLYBL
TMEM185B
ANXA6
CFAP92
TFPI
SPAG9
C11orf94
UGCG
MPP4
TPRN
ITPRIP
EHHADH
ZNF697
GNG10
SEPSECS
ADRB3
MYO18A
LHX8
PTPN3
CSPP1
KMT5C
ALOX5
SLC2A3
USP43
AKTIP
PDGFB
GRHL3
ADGRG1
RDX
HSF5
GALNT11
CD177
TMC1
SLC52A3
ZNRF3
EXPH5
ELMO2
TBC1D12
RRM2
BRIP1
TGFB3
IFT43
PRPH2
STON1-GTF2A1L
IL1F10
SLC12A6
H1-6
CDK7
SLFN12
ATG9B
ABCB8
CSGALNACT1
HSPB3
AMOTL2
ZMIZ2
CLPB
APOBEC3B
ZNF335
FRG2
GOLGA8B
CYBRD1
DTWD2
ATMIN
CLIC4
AFF1
SLC9A8
DNASE1L3
ISM2
SLC12A8
BLCAP
BCAR1
KRTAP4-2
KRTAP4-1
LATS1
MS4A7
COMMD1
IGFL4
TMPRSS11F
PLGRKT
APOL4
HID1
MKRN2OS
SLC23A2
OTUD4
MRTFB
IGF2BP3
DIAPH3
CREM
TMC5
CDS1
OPHN1
SYTL5
KBTBD6
CATSPERG
LIMS2
TMEM211
FERMT1
WIPI1
DENND6A
CPEB3
BCAM
KMT2E
TTLL7
RB1
TFDP2
SZT2
MED8
ARHGDIB
FOS
PLS3
PHLDB3
TRIM16L
RHEX
PLCXD3
SOX7
TMEM30A
CYS1
ZDHHC5
SPTSSA
SMIM19
HEXB
ILF3
BTBD3
PNPLA8
LDB1
SPINK8
C12orf66
SERPINB7
SCNN1A
LTBR
SLC29A1
METTL27
HCAR1
PRPS1
TREML1
UBXN2B
WFS1
GJA10
NSFL1C
AMZ1
DUSP14
EDNRB
ANK3
CANT1
FBXO34
FOXK2
PDIK1L
NAA38
CHD3
SQLE
ANKRD31
CDK3
IL36G
SETD3
SERPINB2
SLC39A1
CREB3L4
RIOX1
YPEL5
ROR2
STARD13
STYXL1
PCYT2
MDH2
CS
THAP3
NRK
CHRM5
RABEP1
PTPRE
SHROOM3
PICALM
SEPTIN3
JUN
CLPSL2
CLPSL1
SERPIND1
PRPF38B
PMF1-BGLAP
PMF1
TOMM34
KANK1
GRAMD1B
NXNL2
STYXL2
GPA33
MMP2
ARHGAP45
H2BW1
ANXA4
LZTS3
MYO10
OSGIN2
MTARC1
SELENOI
ADGRF3
SCAMP2
TEX101
DCSTAMP
BAHCC1
RHOH
C9orf131
FAM118A
ZBTB7C
RNF111
SH3KBP1
TIGD2
KCTD7
TBC1D13
OR5H14
SCAMP4
ADAT3
BATF
TIAM2
MPZL1
TLE1
HOXC12
ATP1A1
PTP4A2
JCAD
ZNF83
LYRM9
TLN1
CREB3
CFB
RNF19A
SON
LATS2
GART
EHBP1
WT1
RPS14
SULF2
HEATR6
PLAA
IFT74
TMEM44
ARHGEF3
PTPN14
BRI3
MARK2
GAS2L3
GPR82
WDR87
SIPA1L3
CYP19A1
RECK
GLDN
RBM45
PDE11A
CALR3
C19orf44
WBP1L
CAP2
PUDP
AAK1
PADI1
HOMER1
PTPRD
FAM151B
TOP1MT
FHL2
URB2
TAF5L
ICA1L
TLE3
KL
SULT1A4
SULT1A3
BOLA2-SMG1P6
BOLA2
ZMYND11
SOCS2
EIF4E3
METTL25
CCDC59
NLRP7
RIMKLB
MSANTD3-TMEFF1
RANBP2
BCOR
C16orf46
IGFL1
RHOB
PTN
UBE2C
POGLUT2
MIDN
BIVM
CD164
LIMA1
TMEM130
JADE1
ZP3
ZC3H7A
LAMA5
IGSF5
SH2D5
SLC11A2
IRAK2
PPP1R9A
HNRNPR
STK33
RHNO1
FOXM1
RESF1
NEURL3
SPECC1L
MED13L
MAFG
STATH
SMAD5
AGAP3
LHB
DDX41
CNPY3
ITGB3
CCL28
ZNF799
NOCT
EGFR
PLXND1
HTRA4
LMO7
CKB
SDC4
RAB31
RHOD
ANAPC7
RTL8C
RAB11FIP4
SLC4A8
GALNT6
ALDH4A1
GEMIN6
PLS1
CMYA5
CYSLTR2
KRT18
PDE4DIP
MEF2A
SPX
FOCAD
SMARCA2
SIGLEC15
CFLAR
MID1
S100A16
CFAP410
SCNN1B
SULT2B1
CDHR3
TRA2B
SPRED2
C1orf105
RTN2
PPM1N
TNF
LTB
ADIPOR1
CD59
MPP1
TNK2
PODXL
WWOX
INO80B
LRPPRC
WEE1
PALM3
TFCP2
MILR1
GPC4
DTD2
ZBTB12
EHMT2
C2
LOC102724265
ZNF674
ADAM22
PLA2G2E
CCDC177
CCDC88B
NEURL1
TTLL4
SPOP
EEA1
FSCN1
PLXNB1
LMBRD1
DLST
C11orf95
ALDH3B2
CYB5R1
GPR171
FOXC1
NEDD4L
FBXL3
HSPB7
CLCNKA
NHSL1
SPHK1
IMPDH1
SF3B4
PTGR1
CALHM4
ELF3
USP36
DENND1A
FAM83A
PPM1H
OSBPL11
HAVCR2
SPINK4
LARP1
LYPLA1
LDLRAD1
TSEN2
TOR1AIP2
TINAGL1
SLC49A4
HSPBAP1
B4GALT5
GGTLC3
KLRC2
SPAST
KYAT1
UXS1
UPF2
MRPS24
TUSC1
FZR1
MIIP
DIO1
XCR1
ITGAL
ZBED9
MOG
TJP2
HSPA9
ZXDC
MAP1LC3B
FBXO31
CDHR2
SALL4
RGS8
SPATA9
RHOBTB3
LIN28B
PHACTR2
SLC9A1
ZNF836
USP39
SAP130
C2orf68
MIOS
SLC3A1
TUSC3
TMEM40
TRPV2
TSKS
AP2A1
COL7A1
EIF3C
STK11IP
RUVBL2
NWD1
GYS1
SOWAHC
SEPTIN10
HSPB1
POGK
TBC1D24
NTN3
PPEF1
ASAP1
VHL
KRT3
FGD4
EFR3B
PDCD1LG2
ABCA4
ZNF451
RAPGEF6
CCNG2
EEF1AKMT1