ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10476669 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◣ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
XKR7
IQSEC3
INSM2
LIN28A
MTRNR2L2
MSH3
DHFR
FAM24A
CELSR3
MAMDC2
HTR5A
KCNH7
L1CAM
MTRNR2L1
MTRNR2L8
GLRA1
NKX1-1
ZC3H18
WDR74
STX5
SMIM17
EPHA10
DUX4
DLGAP3
RAB37
EAPP
CHGB
LOC102724770
DGCR6
MAST1
RTBDN
ICMT
HES3
MAPK8IP2
CPLX2
UBE2Q1
CHRNB2
SNAP25
CADM3
GDAP1L1
MYT1
RANBP3
BARHL1
NPPB
SCRT2
SST
NTSR2
LPIN1
SCRT1
DGAT1
MTRNR2L9
NRSN1
FRG2C
ANK1
SIGLEC10
LHFPL5
CLPS
GRM1
SRRM3
BPIFA3
PTPRN
MMP24
SEZ6L2
ASPHD1
SLC12A5
CABP7
CHRM4
SEZ6
ZNF23
CCDC92B
VWC2L
MUC3A
USP30
SVOP
MARCHF4
BICDL1
SCGN
GPRIN1
RIPPLY2
CYB5R4
SLC39A3
ZFR2
ATCAY
PDE1C
HS3ST2
VGF
PGBD5
KCNK12
TMEM181
UNC80
DNAJC6
PCDH8
SPNS2
PDE4C
STMN3
RTEL1
NEUROD1
LEMD3
KIF5C
STX16
JPH4
PPP2R2C
QTRT1
GPR6
CACNA1B
SLC18A3
CHAT
OGDHL
THAP7
P2RX6
TPH2
CRH
CA4
RAB11FIP4
CDK5R2
CDC16
SLC7A6OS
PRMT7
SLC9A1
CEMIP
UNC13A
HBA2
HBA1
PAX5
HBM
KCNAB2
C1QL2
RFC1
FN3K
GJA10
ACSL6
SCG3
PET117
KAT14
RESP18
PPFIA3
C19orf73
SCAMP5
CCDC200
CHGA
KDM3A
POLR3E
AKAIN1
GCFC2
FBXL16
PRMT8
NCAN
SLC7A14
FMNL3
HPCA
PMVK
KLF11
SCGB1D2
EVI5
TMEM242
TMEM179
LHX5
MARCHF11
KCNB1
STAT1
ODC1
RBM45
PDE11A
CDK5RAP1
CENPA
MAPK11
MAPK12
CTDSPL
PTMA
FAM227B
DTWD1
NPDC1
ENTPD2
NDUFAF5
ESF1
CTXN2
MGAT3
GRM4
SKOR2
IKZF3
ZPBP2
DHRS2
ZNF513
SNX17
EIF2B4
FBXO41
EGR4
LTV1
TMEM106B
ANKRD36C
CTNNA2
SNRPB
GTF3C3
C2orf66
PSMD3
CDIP1
HRH3
RAB5IF
SPOP
TAF12
CBFA2T2
RHOB
ZDHHC22
PCSK1
N6AMT1
TIGD1
EIF4E2
WASHC2C
SHOX2
FUS
IRF9
NRL
DCAF11
OGFOD3
HEXD
FAM237A
SRSF6
HHATL
PEX3
ADAT2
DEFB132
NME1
DTD2
H4C11
H4C12
H2BC14
H2AC14
KATNA1
MFSD11
SRSF2
ST8SIA3
CLUAP1
C16orf90
MLN
GRIA2
CYP4F3
XKR4
GRIK2
MFF
WDR36
SNRPB2
PCNA
TMEM230
TMEM107
CDS2
ABCA3
POLR2J3
NUF2
SIRT4
NXF1
RNF103-CHMP3
RMND5A
RAP1GAP
PTPRS
RBM39
POLDIP3
TRIM48
ABCC6
NOMO3
CMTR2
CCNC
NDUFA12
SUPT3H
CPPED1
AP3B2
HTR1A
OPRM1
TRIM67
BHLHE23
H4-16
H2AJ
KCNH6
NID1
MYBL2
TEFM
TOMM5
RNF130
RANBP2
PTPRH
CWC25
AATF
UTP11
FHL3
BAIAP2
MIA2
NDUFS7
DCAF10
AARS2
POU2F2
CFAP65
NOP14
GRK4
TOP3B
ZNF285
JUNB
ZBTB22
TAPBP
SMIM40
DAXX
SCNN1G
FRG2
KIAA0895L
EXOC3L1
E2F4
XRN2
UGT2B10
TGM1
RABGGTA
ZNF207
C17orf75
RPS2
RNF151
TBL3
NOXO1
TIA1
PCYOX1
PRDX1
GRIN1
S100A8
S100A7A
TPBGL
JPH3
POU4F3
PTPN6
C12orf57
PTGES3
LRRC59
PNPT1
TCFL5
POLR2C
TOB1
APOB
RGPD2
RGPD1
MDP1
CHMP4A
GOLGA6D
HDAC4
HBQ1
DCTD
CLCN7
NOP56
SYP
ZC3H7A
ZNF721
PIGG
METTL15
KIF18A
ZNFX1
E2F3
DCP1A
NOMO1
WDR35
NOL10
POR
HECTD1
SLC25A10
MRPL12
MED23
PAQR7
MNAT1
LUC7L3
BRMS1L
SLC38A2
DDIT4
CPNE9
BMS1
TVP23B
MTERF4
PRMT5
LATS1
DUS2
DPEP2NB
DDX28
SRP19
SRSF7
CACNB2
RPS7
PAQR4
KREMEN2
PMS2
AIMP2
ZFYVE27
SRP54
PSMD7
ARL17B
MAP3K19
GPN3
FAM216A
FOXN2
DPP10
LAMP1
TSGA10
MTIF2
MRPL2
KLC4
CUL7
LRRC24
C8orf82
DNER
TM9SF1
IPO4
ANAPC11
ALYREF
PLS1
KCTD5
TSSK4
HCRT
KCNH4
RRN3
TTI2
LTB4R2
LTB4R
CIDEB
PPP1R3C
RBM28
USP14
AAR2
MAPK8
HS6ST1
DMAP1
FRA10AC1
PTDSS1
MTERF3
PDHB
TINF2
GMPR2
INA
BRSK2
SMDT1
PHETA2
NAGA
MRPL53
MOGS
CCDC83
TACO1
CITED2
CALM1
H3C4
CHEK1
H4C4
H2BC6
NMS
TOB2
METAP1D
BCL7B
GPR158
SULT4A1
SLC6A17
GPR78
TBCD
ACTA1
EEF1AKMT1
CCNL1
HDAC2
VTA1
NMBR
HEATR5A
SYNJ1
NEDD9
ANO10
ABHD5
MTF2
TAF5
SRFBP1
DDX1
ATP5F1E
MAPKBP1
DOCK6
GSX1
MRPL30
MITD1
H2BC15
H2AC15
UCKL1
PLEKHM3
MTERF1
SPATS1
DDC
NOC3L
SNF8
CEBPE
ZNF473
VRK3
INTS12
GSTCD
TBC1D19
LMF1
TMEM129
TACC3
SLBP
USP39
C2orf68
KANSL3
FER1L5
SPR
MAJIN
IHH
SCRN2
OSBPL7
LRRC46
PKP4
CCDC148
MAT2A
RNF227
NSUN5
P4HA1
ZNF579
USP40
NGEF
H3C15
H3C14
H2AC19
H2AC18
H4C14
H4C15
NFATC3
ZNF292
ZNF337
ARID3A
GADD45A
OPA1
PRKDC
MCM4
ARL4D
RAD54L2
BRF2
SPATA25
CTSA
NEURL2
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
ZSWIM1
ACSL3
CCZ1B
NUP153
SNRPD1
NET1
RAB7A
CLTB
SOD2
RPS6
WTAP
NSFL1C
CYP21A2
NHLRC1
SNAP47
JMJD4
THADA
INTS5
GANAB
SLC37A4
CPNE4
CEACAM5
RSPH3
PIK3R3
C12orf65
RPF2
BPHL
VRK2
GDF7
HBS1L
GATAD2A
EXOSC6
ATIC
ZNF398
ZNF425
HAUS5
RPL9
LIAS
MRPS23
SRSF5
GINS1
WWP2
NOB1
FBXO9
CILK1
GPSM1
DNLZ
CARD9
DCPS
GOT2
TMSB10
RAB18
SUPT7L
SLC4A1AP
COQ8A
HNRNPC
DNPH1
ACTL10
C20orf144
SMPD3
NBPF1
POLR1F
TMEM115
NPRL2
CYB561D2
WASHC2A
ZMYND10
RASSF1
MBTPS2
STX18
CDH4
HMGA1
UBA52
TPRA1
LTN1
PRRG2
NOSIP
CAAP1
NFKBIA
NPIPA3
NPIPA2
COX7A2
DGKD
ASL
PODXL2
ATP2C2
RPS15
TRIP4
PCLAF
ENO1
ZNF461
EPM2A
RHOT2
RHBDL1
SSNA1
ANAPC2
GOPC
ABT1
CSE1L
PPIP5K2
UBB
RHBDD1
INTS6
SLC38A1
IRS1
CLU
DIP2C-AS1
DRG2
TMEM101
NOP9
DHRS1
CSTF1
AURKA
MPHOSPH10
MCEE
TTC4
MOB4
RTF2
FANCL
ZNF789
ATP5MF-PTCD1
ATP5MF
STEAP1
PIGU
ARL14EP
DLG2
SMARCD2
SNRPG
FAM136A
MTHFD1L
SSR3
SCFD1
SLC16A3
TMEM216
PDE2A
KPNA5
CC2D1A
C19orf57
RPL10A
LSM12
G6PC3
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TBC1D13
ARL6IP1
NFKB2
SLC6A12
ESYT3
ASS1
RPL12
LRSAM1
TSR3
GNPTG
ZSCAN32
ZNF174
PEBP1
RPS20
PHF3
SMC3
MRPS35
ATP6V1B2
WDR33
RNF10
COQ5
H3C3
H2BC3
CLVS1
VMP1
PTRH2
MRPL3
FLYWCH1
LRRC37A3
SCAP
ANKRD36
MRPS10
SMTN
ZNF606
NEK3
CBSL
CBS
C20orf202
NAGK
PRPF3
NMRAL1
HMOX2
STK25
HSF4
TMEM14A
H4C3
H1-6
DIS3L2
G2E3
NOL3
NUFIP2
LOXHD1
TMEM200A
SAMD3
UTS2R
C10orf88
FAM133B
HEXA
KCNC3
CHD9
DBNDD2
GOSR1
PITRM1
TXNDC17
KIAA0753
PLA2G10
SSTR5
ETNK1
DHRS4
IL25
CMTM5
BEAN1
CEP295
SLC3A2
GORASP2
PCMTD2
RIOK2
SLC25A36
SF3B5
NDUFAF3
DALRD3
UCHL5
RO60
IMPDH2
ZSCAN9
WDR12
CARF
ANXA2
TANK
DNAJA2
SH2D2A
NTRK1
CDK3
SAYSD1
NUP50
YARS1
S100PBP
RPL31
SRSF3
WDR45B
SLC25A21
SNX18
PPIP5K1
CKMT1B
DNMT3A
PROCR
LBP
THOP1
SGTA
HINFP
UPF1
HES4
SIT1
CCDC107
ARHGEF39
CERS6
NME6
SKA1
WSB2
ASB6
EBPL
ISG15
TM4SF4
MAP1LC3B
FBXO31
IPMK
CISD1
ARMC5
PARL
PRKAG2
SMIM26
ZNHIT3
ZNF843
ID2
MRPS18C
HELQ
TASOR2
IARS1
TARS2
TTC7A
MCFD2
SMU1
FUNDC2
F8
TK2
CKLF-CMTM1
CKLF
MRPL45
ASNSD1
ASDURF
TMX3
CCDC102B
FITM2
ZSCAN22
TOP1
NCL
TMEM167B
PTPN1
AFAP1
SNX16
PRORP
PPP2R3C
S100A7
SOCS3
DDX19B
AARS1
ZSCAN12
CEP68
ASB2
RGPD8
RGPD6
RGPD5
FLRT3
TMEM106A
GTF3A
RSL1D1
SCAND1
VARS2
GTF2H4
SEH1L
MRRF
TBP
PSMB1
FEM1B
ROCK2
WDFY1
PCK2
WASHC1
INO80C
TBC1D22A
ATR
TMEM186
PMM2
NOMO2
UBAP2
TRAF6
RAG1
C7orf25
ACTR3
SNED1
AXIN2
ITPA
DDRGK1
ZNF3
COPS6
FOXJ3
USP28
SPTSSA
FRG1
ATAD2B
RNF187
CYP2E1
KIAA0319
PEDS1-UBE2V1
PEDS1
HAAO
PRKAR1B
PARN
BFAR
TTLL4
NFKBIL1
DDX39B
ATP6V1G2
TNPO1
LTO1
DIABLO
RABGGTB
RETSAT
ELMOD3
FAM83D
PSMB5
PSMB11
SRXN1
CCNP
SOD1
TRAM2
PRXL2B
FAM228B
TP53I3
SF3B6
DPY19L4
LDHA
COX10
SUMF1
TRIM44
RAF1
BCAS4
HMGN3
CIBAR2
ZNF878
NOL7
WBP1
INO80B
FAN1
OXSM
NGLY1
LCMT1
PIKFYVE
CRLF3
ATAD5
IER5
MACC1
PSMD1
CFAP100
ZBTB45
SLC27A5
BIRC6
RPS15A
KRI1
CDKN2D
EBAG9
RPLP1
MRPL20
CCNL2
NFE2L2
PARP16
RBM12
CPNE1
GUSB
NAA20
AP3S1
RUSF1
DCLRE1B
AP4B1
CCDC43
AGGF1
METAP2
HERPUD1
GZF1
SF3A3
EIF4A3
SENP1
PFKM
EIF2B3
USP4
RFC4
MSH6
C16orf89
ALG1
ZNF212
SLC45A4
PSD4
HNRNPH1
RCBTB2
TSSC4
TRAPPC6B
PNN
NR1H3
ACP2
COG6
ZKSCAN8
ZNF410
GEMIN2
CDC73
ZER1