ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025672 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◣ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MTRNR2L2
MSH3
DHFR
DUX4
PMF1-BGLAP
PMF1
MTRNR2L8
MTRNR2L9
GPAM
PEMT
NME1
DRG2
SNX25
CFAP97
MED9
SSNA1
ANAPC2
SLC35E2B
KIF5C
SLC35E2A
DUS1L
PHF7
BAP1
CDKN2C
FAF1
ZSWIM7
TTC19
TDG
C12orf73
NDUFS7
LAMP1
ZNF296
GEMIN7
RRP1
PCBP1
ATP6V0C
AMDHD2
TRIAP1
COX6A1
MRPL21
IGHMBP2
CCDC86
NME2
HEXA
PKN2
NOP56
WASHC2C
CIAO3
UTP25
TMEM222
GGCX
POLR1F
CNOT6
COPS3
COMMD1
CCT4
EPRS1
UNC45B
NLE1
FLCN
AKAP10
HAUS5
GTF2H3
EIF2B1
RGPD2
RGPD1
ZMPSTE24
SLC39A3
WASHC2A
PMP22
ANKRD40
PCID2
CUL4A
RPLP0
GCN1
ADORA2B
RPS2
RNF151
TBL3
NOXO1
ITGB3BP
EFCAB7
DLST
TRMT61B
MAGOH
GET4
DENR
SRRD
HPS4
RBM42
TVP23B
SPRYD4
ABT1
ARSG
SLC16A6
ADPGK
RBBP5
EIF2D
JOSD2
ASPDH
ATXN1L
PIGL
NCOR1
RASD1
LSM12
G6PC3
RLF
FBXW8
MARCHF8
FRA10AC1
RNF166
CTU2
PRKAR1B
COL23A1
EED
CCNL1
TACO1
MPHOSPH10
MCEE
DPH5
MPRIP
GARS1
RAD54L2
THAP9
SEC31A
LANCL2
C8orf33
BAX
MRPL15
OTUD7B
CWC25
SUPT5H
RPS16
MRPL44
CENPV
NOXA1
TMED9
B4GALT7
LRRC37A3
SNRPD1
FAM227B
DTWD1
PURB
GID4
ATPAF2
MANBAL
MTF2
DHX33
NT5M
CLN6
PBX2
GPSM3
ACSF3
SF3A3
SLC39A4
CPSF1
IARS1
RANBP2
OR6B2
NDUFA10
LRRC59
NOP9
DHRS1
TOP3B
TTC4
PLEKHM3
AKIRIN1
MDN1
DPY19L4
ZNF770
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPS16
DNAJC9
NUP54
COX10
RBM39
GTF2H2C_2
GTF2H2C
MRPL16
C2CD2
PLD6
CCDC57
TVP23C
PEX3
ADAT2
GNPDA1
FKTN
GLRX5
MNT
RPL6
PTPN11
NUF2
MAGOHB
TSR3
GNPTG
TMEM41A
YBX1
MRPL3
SUPV3L1
DDX1
AHCY
UBB
HS3ST3B1
C1orf74
MRPS18C
HELQ
SLC31A1
FKBP15
ZSCAN22
TBC1D13
UBA1
CYCS
BTBD10
NMNAT1
LZIC
DGKZ
DCAF8
PMS2
AIMP2
POR
SRM
MYO9B
HAUS8
SLC25A33
PSMF1
UTP4
DERPC
CHTF8
PINX1
FRG2C
TRIP4
PCLAF
SLC5A6
CAD
ATRAID
SEC13
NFAT5
RAD50
POLG2
DDX5
CEP95
DUS2
DPEP2NB
DDX28
TIMM23
NFE2L2
CRLS1
MED23
METTL25
CCDC59
INTS12
GSTCD
SUMF2
GTF2H2
MKRN2OS
MKRN2
MRPL4
SLC39A13
PGAM5
FAM98B
MRPL55
NUDT9
TEX38
ATPAF1
PTOV1
SACM1L
CACUL1
ERLIN2
COA8
BAG5
C10orf95
STK10
EFCAB9
LSG1
SSU72
CLCN7
WDHD1
SOCS4
FAAP100
PARK7
TMEM262
TFDP1
SAR1B
YAE1
PEBP1
SAMD13
NOC4L
DDX51
TATDN3
NSL1
TBL1XR1
GOSR2
CALM1
GPHN
SH3GL1
CHAF1A
DCP1A
DRAM2
CEPT1
HNRNPU
FAM156A
FAM156B
NEURL4
ACAP1
SLC25A40
DBF4
PSMG3
SMYD4
RPA1
CYREN
ZNF18
AP5Z1
SPATC1L
NCBP3
CYP20A1
TRIP13
BRD9
CSNK1G2
ZNF639
TRIM25
ZFAND3
TAF4B
TIMM23B
PARG
ZNF286A
PBK
PPRC1
OAZ3
USP15
DNAJC11
VSIG10
PDS5A
STXBP4
COX11
FRG2
EIF3B
USP32
RHEBL1
KMT2D
VPS37B
DHX40
TMA7
CCDC51
ATRIP
ZNF800
NBPF1
ETV3
MAP3K7CL
CCT8
FUS
INTS13
FGFR1OP2
RPL10A
MAP4K5
ATL1
SPRTN
EXOC8
N6AMT1
ANKRD26
PHF12
DNAJA3
CORO7-PAM16
CORO7
RAB35
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
PGP
BRICD5
SMARCA4
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
MAZ
PAGR1
TUBD1
RPS6KB1
FAM220A
KHDRBS1
MVP
VDAC3
ENTPD6
LUC7L2
APOLD1
PRMT2
POLA2
SDHA
CCDC127
CXorf38
RAD21
SMIM11B
SMIM11A
SRSF10
ACTN4
FAM98A
RANBP3
BNIP3
LONP1
CATSPERD
SAYSD1
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
XPO5
POLH
TMEM143
SYNGR4
MCRS1
TOLLIP
PDRG1
BANP
FAM122A
ATP6V0E2
ITPA
DDRGK1
SAMHD1
PPP6R1
EID2B
EID2
CENPBD1
GTF3A
ZBTB17
THAP7
ABCF3
EHMT1
DAGLB
RABIF
TMEM250
MAMDC2
LYRM7
HINT1
UAP1L1
NPRL3
MAN1B1
FAM24B
ABCA3
RPP38
ACBD7
HNRNPH1
CHMP7
RAX2
MRPL54
APBA3
SPPL2B
LSM7
RAB18
CBX5
TK2
CKLF-CMTM1
CKLF
HNRNPA1
WIPI2
FMC1-LUC7L2
FMC1
MYPOP
ZNF12
PRR30
PREB
HNRNPL
MTHFSD
NAGK
IFNAR1
MIS18A
NDEL1
SH3YL1
ACP1
USP21
FAM71E1
EMC10
PPOX
XRCC2
TMED4
DDX56
MOK
LOC100287896
LIPT2
CRTC1
KDM8
ALKBH5
SLC2A11
PATL1
PITPNB
CBY3
RCBTB2
C19orf81
FAM200B
MAP2K7
PPP1CB
WWP2
YEATS4
SOD2
NOB1
RPL36
MICOS13
HSD11B1L
CDC7
PPP2CA
WDR74
STX5
PTPN4
UFC1
SELENOI
ADGRF3
SLX4
MAP2K2
FADD
MRPL45
SPDYE6
LOC100289561
MTRNR2L1
NELFCD
PTK2
TMEM141
CCDC183
WDR4
CHD1
SAFB2
SAFB
GPI
OARD1
NFYA
OPA1
ZNF576
IRGQ
TRIM37
SRSF1
FXYD3
NPM1
MTCH2
POLR2J3
RBM17
MRPL24
HDGF
FUT8
NANP
RTL10
GNB1L
CACYBP
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
THOP1
SGTA
MRFAP1L1
BLOC1S4
HASPIN
DYNC2I1
OSCAR
NDUFA3
MSL2
HP1BP3
NPAS4
RALGAPB
TOMM20
GMCL1
TDP2
ACOT13
NUP50
SPOP
SNRNP70
THAP5
DNAJB9
EEF1AKMT1
CCT5
ATPSCKMT
DPF2
AKAP1
TOR1AIP2
TOR1AIP1
THOC3
CCNQ
DHDDS
GATD3B
GATD3A
GDF5
CEP250
SARS1
SRRM1
TMEM139
CASP2
NUP214
ASNSD1
ASDURF
INTS7
DTL
CRB1
TAX1BP3
EMC6
SPDYE7P
POM121
ACAT2
MAP1LC3B
GH1
FBXO31
CSHL1
CAPZA2
TMEM209
SSMEM1
UNG
ALKBH2
CALR
PBLD
HNRNPH3
PPME1
C2CD3
ARFGAP3
COP1
SMIM14
MRS2
NAPG
RAD23A
AP3B1
GRB2
C6orf136
TASOR2
TBC1D5
LRFN3
PRR14
FBRS
SPDL1
RNF149
CCDC106
PDXDC1
WDR13
IPMK
CISD1
DYRK1B
ERCC6L2
GPS2
EIF5A
TMEM70
ELOC
TIGD1
SLC39A7
RXRB
RING1
HSD17B8
EIF4E2
SHBG
FXR2
CDC34
USP10
SS18L2
SEC22C
STS
PUDP
NDUFA8
MORN5
EPS15L1
U2AF2
XPO7
DOK2
UBE2M
RBAK-RBAKDN
RBAK
CHMP2A
CDC5L
PAPSS1
SCAF11
ZMYM4
CDC20
PALB2
DCTN5
HSF1
BOP1
C8orf48
RSL1D1
HINFP
PRELID3B
COL11A2
CC2D1A
C19orf57
SRD5A1
NSUN2
ZNF638
ESRRA
CATSPERZ
WDR18
USO1
TMEM104
NAT9
KIFAP3
SMARCC1
ARPC2
ZNF664-RFLNA
ZNF664
CCDC92
RPS7
TFB2M
CNST
MPC2
DCAF6
SLC25A11
RNF167
PFN1
MTG1
UROS
BCCIP
ZBTB45
SYS1
ICMT
HES3
GZF1
HBS1L
MYL5
ATP5ME
C5orf24
GP1BA
TMEM63B
MRPL14
STYXL1
MDH2
NUDT1
MRM2
THAP11
TMEM43
CHCHD4
TRIP6
SRRT
UTP18
MBTD1
MORF4L1
C15orf40
MKNK2
DFFB
CEP104
SRCAP
LOC730183
TIA1
PCYOX1
EID1
CBWD5
DSN1
TIGD6
HMGXB3
C6orf89
KCNN1
RPS11
RPL13A
CCDC93
SCAND1
MINK1
WDR43
TENT4A
TMEM63A
LEFTY1
MRM3
GLOD4
ZNF34
RPL8
MAPKAP1
AURKB
NUDCD2
HMMR
PPP2R3B
DIDO1
CBWD3
SPDYE16
POP7
PUM2
MRNIP
TMEM109
PRPF19
GID8
POLR2J2
CELSR3
ALG8
AURKAIP1
GOLGA1
ING1
FZR1
CARS2
MAD1L1
DLGAP4
ZNF517
GABARAP
NBPF3
TOPORS
SMIM27
NR1D1
MAPKAPK5
CCDC200
DOHH
FIP1L1
SKA3
MRPL57
NOP14
GRK4
POLR2J
PUF60
PARP6
AHCTF1
TFAP2A
MARCHF7
CBWD6
TMX1
BORCS6
PPAN-P2RY11
PPAN
ANGPTL6
EAPP
PRDM4
PIAS4
AASDH
KDM3A
TSEN2
ENDOV
TMEM18
CPLANE2
RNF130
CFAP410
LINS1
ASB7
MBD1
CXXC1
ZZZ3
PTBP1
PHF23
DVL2
TIPIN
UPF1
COPB2
GPBP1
TLX2
PCGF1
LBX2
PRKDC
MCM4
IPO11
DIMT1
PPP4R3B
ZBTB2
RPL12
LRSAM1
CCNC
ZNF248
TTC32
RFX1
COASY
UCN2
PFKFB4
ATXN7L2
C8orf37
NUP153
CLPTM1L
B9D1
E2F6
RNF32
ZBTB14
TAOK1
RTN3
XPC
LSM3
ATL3
WWOX
MED1
CDK12
WWP1
RPS29
WRNIP1
MYLK4
NOP16
MAK16
HIGD2A
PGRMC2
AMACR
PEX12
AP2B1
MIDN
CBARP
ATP5F1D
CNOT4
ANO10
ABHD5
RPS19
LTV1
VARS2
GTF2H4
KIF22
NAPB
RPRD2
TUBGCP5
CAPN7
PSMB2
TSACC
CCT3
ATP5MC2
ARHGAP35
AP2S1
TSSC4
SLC25A10
SIRT5
MRPL12
ZFP91
TMCO1
LPXN
NAT10
MLX
POFUT2
TAS1R1
NOL9
LHX9
C1orf53
ATAD3A
PRDX1
ATP5PO
ZNF48
TRAPPC9
TMEM79
SMG5
NFXL1
EIF2S2
DHX9
IL4I1
RPS6
PSMD5
NRF1
RAD23B
UBE2D3
SLC15A4
C11orf80
SEH1L
CENPS-CORT
CENPS
SBNO1
SRSF11
INO80C
UBR3
METTL5
PTPN21
SREBF1
ARF4
ZNF692
VMAC
NDUFA11
E4F1
SNX5
MGME1
STX1A
IQCC
DCDC2B
CCDC28B
NOL11
RPL27A
ABHD10
SCAMP5
STX16
DNMT1
METTL22
PRPF39
XKR7
NCOA4
HSD17B1
COQ9
CIAPIN1
UIMC1
KAZALD1
EHD1
GAS8
SPG7
HSPA4
TMX3
CCDC102B
ZC3H14
EIF2S1
ATP6V1D
POLRMT
FGF22
CEP350
ERGIC2
GPAA1
EXOSC4
VPS13C
C2CD4A
TAF12
ANKFY1
PAOX
ECHS1
VMP1
PTRH2
QRICH1
SPEN
NAA38
SLC30A5
CCSER2