ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10476670 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◣ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
XKR7
IQSEC3
INSM2
LIN28A
FAM24A
MTRNR2L2
MSH3
DHFR
NKX1-1
L1CAM
KCNH7
CELSR3
GLRA1
MTRNR2L8
MAMDC2
RAB37
SMIM17
MTRNR2L1
HTR5A
CPLX2
WDR74
STX5
DUX4
EPHA10
RANBP3
EAPP
ZC3H18
MAST1
RTBDN
CHGB
MAPK8IP2
DLGAP3
SST
LOC102724770
DGCR6
MTRNR2L9
BARHL1
UBE2Q1
CHRNB2
GDAP1L1
SNAP25
SIGLEC10
ANK1
FRG2C
ZFR2
ATCAY
CADM3
SCRT1
DGAT1
UNC80
GPR6
SRRM3
CCDC92B
MYT1
PGBD5
DNAJC6
NPPB
VGF
LHFPL5
CLPS
SLC12A5
ICMT
HES3
JPH4
CABP7
NTSR2
LPIN1
PTPRN
MUC3A
KCNK12
VWC2L
OGDHL
KLF11
CRH
MARCHF4
RAP1GAP
KDM3A
STMN3
RTEL1
NRSN1
PDE4C
GRIA2
NEUROD1
FN3K
PPP2R2C
QTRT1
SEZ6
MMP24
SCRT2
PDE1C
PTMA
ZNF23
SLC39A3
SCGN
AATF
LEMD3
ABCC6
NOMO3
KIF5C
BICDL1
RIPPLY2
CYB5R4
PAX5
RBM28
CDK5R2
ACSL6
CHRM4
POU4F2
MED23
USP30
FRG2
SVOP
SCAMP5
RESP18
WASHC2C
PPFIA3
C19orf73
H4C11
H4C12
H2BC15
H2AC15
GRM1
RAB11FIP4
BPIFA3
PRMT8
PRMT5
CACNA1B
HHATL
C1QL2
TMEM181
CHGA
LHX5
AP3B2
SULT4A1
CDIP1
RFC1
SEZ6L2
ASPHD1
SOD2
WTAP
RNF130
CYP4F3
MGAT3
SPNS2
CTNNA2
HPCA
CEMIP
CCDC200
TM9SF1
IPO4
TPBGL
PTPRS
MTERF4
GCFC2
MLN
NPDC1
ENTPD2
PCDH8
TAF12
ACTL6B
DTD2
UNG
ALKBH2
ZDHHC22
ODC1
EVI5
TACO1
HBA2
HBA1
HBQ1
KATNA1
HS3ST2
NOP14
GRK4
CA4
MAPK11
MAPK12
PCNA
TMEM230
CDS2
PTPRH
IKZF3
LTB4R2
LTB4R
CIDEB
ZPBP2
FAM227B
DTWD1
DHDDS
GOT2
SLC6A17
TIGD1
EIF4E2
NDUFAF5
ESF1
PLEKHM3
ARL4D
STX16
OGFOD3
HEXD
CEBPE
NSUN5
SLC24A1
SPAG4
DRD2
SNTG1
SCFD1
SLC7A6OS
PRMT7
CYTH1
CMTR2
SCG3
MFF
PTGES3
MRPL58
TCIM
MIA2
TMEM107
KANSL3
FER1L5
NME1
GTF3C3
C2orf66
HEATR5A
FBLL1
TMEM186
PMM2
NOMO1
CPNE4
PPY
DDX1
JPH3
NMS
THAP7
RPL31
P2RX6
ZFYVE27
RNF103-CHMP3
RMND5A
HS6ST1
CEP295
TGM1
RABGGTA
SHOX2
RGPD2
RGPD1
PMS2
AIMP2
DPY19L4
PAQR4
KREMEN2
TMEM167B
EBPL
H3C15
H3C14
H2AC19
H2AC18
CDK5RAP1
H4C14
BRSK2
MARCHF11
OPRM1
TRPM3
MEIG1
DCLRE1C
F5
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
MTF2
PIK3R3
TRIP4
PCLAF
HRH3
H4C15
KCNH6
TMEM129
TACC3
SLBP
TMEM169
PECR
DNAJC11
FUS
CDC16
GJA10
RTN2
PPM1N
SLC25A21
ZC3H7A
SIRT4
SDC4
MNAT1
TRIM67
POU4F3
GPR78
SOGA3
FAM163B
RPLP0
GCN1
FAM228B
TP53I3
SF3B6
HMGA1
TOB2
DPYSL4
LONP1
CATSPERD
MTIF2
HNRNPH1
WDR36
YARS1
S100PBP
MRRF
DUS1L
ANKRD36
ARL6IP1
NHLRC1
SLC17A9
HECTD1
GPCPD1
TASOR2
NPIPB9
RBM39
HCRT
TRAF6
RAG1
KCNH4
GADD45A
FBXO41
EGR4
SOWAHC
SEPTIN10
ZGPAT
ARFRP1
PRDM7
CWC25
GRIN1
FRA10AC1
USP14
SURF6
TINF2
GMPR2
SLC18A3
CHAT
PRLHR
SHISA7
STAT1
NPIPA3
NPIPA2
NET1
IRF9
PLA2G10
TPH2
ABCA3
SRP19
SCAF11
LDHA
SUPT3H
ID1
GPSM1
DNLZ
CARD9
NBPF1
LAMP1
SCGB1D4
POLDIP3
ZNF420
IDH3B
NFATC2IP
CYP21A2
POU2F2
PTPN6
C12orf57
PMVK
ZNF358
ZNF513
SNX17
EIF2B4
RPS7
CPQ
KRI1
CDKN2D
NRL
ANKRD36C
PSMA1
HBM
PCK2
SLC25A10
MRPL12
DHX15
WNK1
EXOC2
GTF2H2C_2
GTF2H2C
SRFBP1
PKP4
CCDC148
CDCA7
KIF16B
R3HCC1
TOB1
GPR158
XKR4
CLVS1
SLC6A5
NOP56
PET117
KAT14
POLR2J3
NXF1
CTSE
NOL7
COMMD1
CCT4
SPATA25
CTSA
NEURL2
ZSWIM1
CCNL1
CLCN7
CSTF1
AURKA
RPL5
POLR3G
MBLAC2
SCGB1D2
CPNE9
LPIN3
TMEM242
CLUAP1
C16orf90
C16orf72
DBI
C2orf76
RHOB
KCNB1
POLR3E
GPRIN1
KCNAB2
SLC38A2
FTCDNL1
HBS1L
PDCD2L
RPL37
CARD6
EIF2B3
NPIPB6
TSGA10
TTI2
H1-2
UGT2B10
SMPD3
SLC30A5
LDAH
ZCCHC7
MDP1
CHMP4A
FMNL3
TUFT1
SSBP1
ZNF3
COPS6
MAPKBP1
NEU4
ATP7B
ALG11
NUF2
CETN3
GET4
TMEM115
NPRL2
CYB561D2
FXN
ZMYND10
RASSF1
SYNGAP1
CUTA
PHF1
OPA3
MRPL21
IGHMBP2
RAD54L2
NSFL1C
DBNL
CEACAM8
PCSK1
DISP3
NTNG1
MLH3
MYBL2
LRP6
ENO1
WDR11
CERS6
APOB
MAT2A
ATR
PTDSS1
MTERF3
H2BC14
H2AC14
H2BC17
H2AC17
KIAA0895L
EXOC3L1
E2F4
H3C12
HMGN3
ZNF556
OPA1
RPL12
LRSAM1
NOC3L
SPR
PRDX1
RANBP2
ZBTB4
SLC35G6
POLR2A
ZNFX1
PCCB
BZW2
ANKMY2
EXOSC6
AHI1
DDX19A
PARL
SLC9A1
ZBTB22
TAPBP
SMIM40
DAXX
LHX3
NDUFS7
LRRC59
VPS33A
RABL2B
TFAP4
GPR89B
SAYSD1
SNAP47
JMJD4
THOP1
SGTA
COMMD2
FRG1
DCTD
VRK2
SDHAF1
N6AMT1
LTV1
WDR45B
CX3CL1
UROS
BCCIP
AKAP10
TOP3B
LRP2BP
ANKRD37
NABP1
FAAH
TTC32
PEX3
ADAT2
MPHOSPH10
MCEE
CHD9
NOMO2
ATP6V1B2
H1-10
DEF8
IFI27L2
SPOP
INTS5
GANAB
MFSD11
SRSF2
FAM207A
RBM45
PDE11A
C17orf50
TK2
CKLF-CMTM1
CKLF
C1QBP
TSFM
FERMT1
TRIM65
MRPL38
FBXL16
HAP1
CCR7
SYNDIG1L
LGALS13
BRINP1
GARS1
RAB5IF
SIT1
CCDC107
ARHGEF39
RIF1
SLC6A12
SEC14L1
RTTN
TEFM
AHCY
PSMD3
MPI
ST8SIA3
DHRS4L1
SEC14L5
VARS2
GTF2H4
PTCD3
POLR1A
EGFLAM
ACTL10
C20orf144
PIP4K2C
NEU1
NCL
RNASEH2C
KAT5
ZKSCAN8
TIMM22
CRLS1
CEP120
EIF4A3
BMS1
SNRPG
FAM136A
PCID2
CUL4A
CNPY3
NCBP3
HMGCS1
ADGRG1
WASHC1
NOS3
KCNH2
SH3RF3
SMARCD2
ZNF207
C17orf75
NOXA1
TATDN1
NDUFB9
TMEM14B
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
RGPD8
RGPD6
RGPD5
NID1
HES6
RARS1
KIF2A
PDF
NIP7
COG8
RPL37A
ZNF367
RRN3
SLC16A3
DPP10
C15orf48
MSL2
DNTTIP2
NR1H3
ACP2
SAR1B
PRKAG2
EFCAB13
TMEM45A
SGK1
SCG2
SORL1
AURKAIP1
DCP1A
VPS26C
IMP4
CCDC115
C14orf93
ZNF565
ZNF146
VPS53
CEP68
CNKSR3
ESYT3
KIZ
SLC39A4
CPSF1
EBAG9
SNAPC2
CTXN1
TBC1D13
KIFC1
H4C3
H1-6
TUBGCP3
PNPO
COX5B
GSX1
GPR142
CBWD5
TSPAN10
NPLOC4
DNA2
ILF3
DDX18
CPPED1
HSF4
ARL5A
ZC3H11A
ZBED6
CENPA
NOL3
ID2
LCLAT1
PPP1R3C
SH2D2A
NTRK1
ATF7IP2
RAB18
TMX3
CCDC102B
RPS15
S100A8
S100A7A
FAM177A1
TMEM179
UNC50
COA5
CTF1
BCL7C
AARS2
NFKB2
OSBPL8
DHRS4
UNC13A
MC1R
HTR1A
TNNT1
TUBB3
PCBP3
KCNC1
PRRT2
MAZ
PPP6R1
SNRPB
MRI1
C19orf53
GTF2H2
NFE2L2
SLC25A3
ELAVL3
HSPA1B
SNX18
APLP2
TRPM8
SULT2A1
TRAPPC6B
PNN
AKTIP
DCAF11
DHX8
DIABLO
RPS3
SRGAP1
DEFB132
ZNF606
GDF7
F7
SCGB1D1
ABCF3
FANCD2
SLC3A2
DSTYK
NUP54
NDUFAF3
DALRD3
IMPDH2
RGL2
PFDN6
SDHAF4
CDH4
FLRT3
MRPL39
GPX1
P4HA1
MRPL27
EME1
ZCCHC3
C20orf96
ZNF337
C16orf89
ALG1
CYP20A1
H2BC5
H1-4
ACSL3
ABHD12
SMIM8
GJB7
GJD3
ACTA1
RESF1
NEURL3
NKAIN2
PRKDC
MCM4
ATP5MC2
SMDT1
PHETA2
NAGA
TBC1D19
NAA20
GFM1
EDEM2
GPN2
E2F3
YPEL1
ZAR1L
BRCA2
FZR1
DOHH
TMEM101
SNRPD1
ZNF165
OR1F12
HDAC2
TSSK4
ATF3
BCAS4
DHRS2
SLC9A3R1
C6orf136
INTS12
GSTCD
RPLP1
METTL15
KIF18A
PSMF1
MRPS23
SLC25A51
ZNF292
BLOC1S6
ATP5F1E
CRYM
THUMPD2
SMG1
TGIF2-RAB5IF
TGIF2
PGRMC2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PHF20
LATS1
SETD6
DEF6
VWA5B2
MST1L
ZFPM1
NUDT1
MRM2
MAD1L1
SNRPB2
PLD6
NME6
RMND1
ARMT1
DBNDD2
RABGGTB
FDXR
FAM83D
EIF2D
DRG2
KBTBD6
KANK1
ZNF554
ING5
AGL
TTLL4
EZH1
SGCA
RUSF1
SKP1
ORMDL3
GSDMB
LYRM2
ANKAR
SYCP2
PPP1R3D
FAM217B
ZNF354B
PIGS
KRT39
ALDOC
SF3A3
SREBF1
MRPS7
MIF4GD
GGA3
TAF1B
PSME3
BECN1
R3HDM2
INHBC
TMEM268
BFSP1
TARS3
PRXL2A
SHH
E2F6
NCOA5
FBL
MYH7B
GSS
EXO5
BAZ2A
ATP5F1B
FBXL17
DLG2
PSMC3IP
MAN1A1
CIBAR2
TMEM121B
CYP4F8
RPH3A
FOXJ3
FANCL
C2orf42
RAP2B
CCZ1B
TMEM30A
ASPG
MRO
CADM1
SLTM
PRKAR1B
ARHGDIA
SPG11
SCRN2
OSBPL7
LRRC46
ATIC
MRFAP1
UCKL1
ZNF398
ZNF425
ZNF343
PICK1
HDDC2
FBF1
CTDSPL
SULT1A1
SELENOP
HCN2
EEF1AKMT1
SCAND1
SCGB1C2
SCGB1C1
ODF3
CCDC150
MRPL53
MOGS
GUSB
PNPT1
HLTF
NUFIP2
TAF3
CBSL
CBS
NUDT16
PCMTD2
ZNF721
PIGG
RPS3A
MRPL30
MITD1
PTPN1
COX16
ZNF461
ABCF1
WNK4
VPS25
PSMD7
CITED2
ROMO1
SMIM26
NECAP2
BUD13
ARID1A