ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3798673 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◣ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

SLC35E2A
MAMDC2
GPAM
MTRNR2L1
DUX4
DRG2
MRPL55
SSNA1
ANAPC2
CCDC86
LAMP1
SLC35E2B
LANCL2
RBM42
MED9
NOC4L
DDX51
AASDH
MAGOHB
TRIM48
RPS2
RNF151
TBL3
NOXO1
CDKN2C
FAF1
PHF7
BAP1
NME1
MRM3
GLOD4
OR6B2
NDUFA10
ADPGK
JOSD2
ASPDH
FAM149B1
ECD
RBBP5
ZSWIM7
TTC19
TRIAP1
COX6A1
MAPKAPK5
RPS6KB2
PTPRCAP
PMF1-BGLAP
PMF1
LSG1
MTRNR2L2
MSH3
DHFR
UTP25
HAUS5
ACOX3
TRMT44
GTF2H3
EIF2B1
NUP153
ATXN1L
MTRNR2L8
NOP9
DHRS1
PEMT
TUT1
MTA2
BRAF
VMO1
PSMB6
GLTPD2
TMED9
B4GALT7
ATP6V0C
AMDHD2
DCT
CNOT6
WASHC2C
INTS12
GSTCD
FANCD2
RAD54L2
RPS29
SSU72
VPS37B
TOMM7
PIGL
NCOR1
ZNF296
GEMIN7
PPIL4
SMG8
EPRS1
FRA10AC1
PEF1
TVP23B
CWC25
RBM23
FRG2C
TRMT5
SLC38A6
METTL25
CCDC59
GTF3C3
C2orf66
SRRD
HPS4
MRPL21
IGHMBP2
RNF166
CTU2
RNF139
BDP1
SRSF11
POMZP3
LRRC40
SNAP47
JMJD4
NUP214
RNPS1
NAT10
TOP3B
ZBTB21
FKTN
WDR36
PKN2
COPS3
ABT1
MTHFSD
MYO9B
HAUS8
DNAJC19
DUS2
DPEP2NB
DDX28
MRPL44
TMEM222
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TTI2
TAF6
MBLAC1
CNPY4
C8orf37
MAGOH
PSMB2
FLCN
IPO11
DIMT1
DMAP1
TRIP4
PCLAF
SUGCT
MPLKIP
DHX40
FCGR3A
HAX1
PPP2R3B
LSM12
G6PC3
DLST
MVK
KMT5B
PINX1
ZNF330
FAM228B
TP53I3
SF3B6
PEX12
AP2B1
JOSD1
GTPBP1
WDR74
STX5
HEXA
WASHC5
NSMCE2
EAPP
POLR1F
HOMER1
RRNAD1
ISG20L2
MRPS24
TATDN3
NSL1
SLC35E1
PTOV1
GGCX
MTRNR2L9
C8orf33
RTTN
NUGGC
ELP3
CCAR2
C8orf58
RRM1
CDK5RAP1
SPTLC1
SAR1B
HSPA6
PRSS27
DENR
SELENOH
UIMC1
CENPE
RALGAPA1
DSTYK
DUS1L
TBC1D17
PNKP
AKT1S1
RPL9
LIAS
WDR4
TMEM39A
POGLUT1
AKIRIN1
CBWD1
PDE4A
CRLS1
UTP18
MBTD1
SPATA25
CTSA
NEURL2
GTPBP10
RLF
TACO1
UBE2A
CXorf56
HNRNPH2
GLA
PURB
STK19
DXO
MNAT1
SSBP1
ZNF547
TRAPPC2B
ZNF335
ADAR
NCAPH2
LMF2
ZZEF1
CYB5D2
JARID2
MRRF
HES4
CLCN7
UBR1
WASHC2A
NOP16
HIGD2A
OGDH
PDE6D
COPS7B
GNB2
SNX16
CCNL1
RANBP2
AIG1
RHEBL1
KMT2D
TFPT
PRPF31
KIFBP
MRPL2
KLC4
CUL7
ZSCAN22
GTF2H2C_2
GTF2H2C
ANKRD40
ZFAND2A
TSR3
GNPTG
ATAD3B
NUDT9
HMGN4
DHDDS
SF3A3
COQ7
COX18
POLG
SNRPB
PRDX2
RNASEH2A
ERLIN2
TAF5
VMP1
PTRH2
GUSB
PPP5C
ANAPC5
FAM122C
FAM122B
IQCH
AAGAB
AOPEP
UFSP2
C4orf47
WASL
RS1
PPEF1
RMND5B
CIAO3
LTA4H
CST6
EIF1AD
BANF1
AP5Z1
ZMAT2
HARS2
HARS1
CMTR1
NUF2
TDG
C12orf73
DDX19A
NFX1
BRF2
LOC110384692
C4B_2
C4B
C4A
C16orf70
ZC3H3
USP14
WDR24
STUB1
JMJD8
QTRT2
CCDC191
CBWD5
CBWD3
BMS1
SLC35B2
NFKBIE
TMEM151B
PARK7
NIPA2
WDR31
BSPRY
HS3ST3A1
GTPBP3
ANO8
ZNF165
OR1F12
RMDN3
GCHFR
MUC3A
SEC13
ZFAT
BBS1
RNASE4
ANG
TOM1L2
DRC3
CYCS
PEX3
ADAT2
POLG2
DDX5
CEP95
ZNF614
PFAS
CTC1
RFC1
SIVA1
MTERF4
SACM1L
FRAT2
DCP1A
GHITM
CTNNBL1
NPR1
ILF2
FAAP100
ITGB2
KLHL20
AQR
ZER1
TBC1D23
RRP1
MAP3K7
SNAP29
PI4KA
CLTC
NEURL4
ACAP1
DNMT1
SLC39A3
STX4
KLHL12
LEO1
AP5S1
DNAJB12
CDK11B
CDK11A
HINT3
FRAT1
ZEB1
PARP16
MAN2C1
POGZ
PCID2
CUL4A
RRP1B
HSF2BP
RPL29
SHF
DCAF8
AURKAIP1
LOC102724770
DGCR6
MKRN2OS
MKRN2
DPY19L4
COPS8
TAF12
TM9SF1
IPO4
CNOT11
EXOSC9
ASAP1
ZNF581
ZNF580
THOP1
SGTA
MRPL40
HIRA
TMEM242
KIF15
KIAA1143
C1D
WDR11
GET4
FBXL18
ETV2
COX6B1
PRKDC
MCM4
PRKAR1B
TRIP10
GPR108
GOLGA3
CCDC97
MAP2K2
STX16
DPH5
PRMT5
ALG10B
MIA3
NKAP
SLC35B1
RFX1
NCBP2AS2
NCBP2
LDAH
BCL3
ZNHIT6
UBC
EED
WDR75
N4BP1
DPP9
TMEM259
CNN2
LUC7L2
FMC1-LUC7L2
FMC1
CALR
RAD23A
METTL15
KIF18A
FAM98B
RCE1
COA8
BAG5
PEX10
ZNF184
OXNAD1
DPH3
ZNF839
ZBED9
RIC8A
BET1L
SYN1
CFP
PMVK
C6orf226
SLC44A1
TPR
ODR4
TRIM7
NCOA5
UBB
CXCL1
GBA
RANBP6
KIAA2026
SP2
SPATC1L
RGS20
ATP6V1H
FCGR3B
TRUB1
MTF2
PSMF1
RAB11B
PRRC2C
SMG7
MRFAP1L1
BLOC1S4
SLC39A4
CPSF1
KNL1
NUP42
UNKL
C16orf91
MFF
POR
TOR1AIP2
TOR1AIP1
PHRF1
DCAF10
ZNF593
CNKSR1
C1orf232
PRKCI
MTIF2
SLC31A1
FKBP15
TBCCD1
DNAJB11
PPWD1
CENPK
DIAPH1
SUPT4H1
SUPT5H
RPS16
H3C15
H3C14
H4C14
LY6K
SPRTN
EXOC8
N6AMT1
ANKRD26
PHF12
DNAJA3
CORO7-PAM16
CORO7
RAB35
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
PGP
BRICD5
SMARCA4
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
MAZ
PAGR1
TUBD1
RPS6KB1
FAM220A
KHDRBS1
MVP
VDAC3
ENTPD6
APOLD1
PRMT2
POLA2
SDHA
CCDC127
CXorf38
RAD21
SMIM11B
SMIM11A
SRSF10
ACTN4
FAM98A
RANBP3
BNIP3
LONP1
CATSPERD
SAYSD1
NBPF1
VPS26B
NCAPD3
ZC3H8
XPO5
POLH
TMEM143
SYNGR4
MCRS1
TOLLIP
PDRG1
BANP
FAM122A
ATP6V0E2
ITPA
DDRGK1
SAMHD1
PPP6R1
EID2B
EID2
CENPBD1
GTF3A
ZBTB17
THAP7
ABCF3
EHMT1
DAGLB
RABIF
TMEM250
LYRM7
HINT1
UAP1L1
NPRL3
MAN1B1
FAM24B
ABCA3
RPP38
ACBD7
HNRNPH1
CHMP7
RAX2
MRPL54
APBA3
SPPL2B
LSM7
RAB18
CBX5
TK2
CKLF-CMTM1
CKLF
HNRNPA1
WIPI2
MYPOP
ZNF12
PRR30
PREB
HNRNPL
NAGK
IFNAR1
MIS18A
NDEL1
SH3YL1
ACP1
USP21
FAM71E1
EMC10
PPOX
XRCC2
TMED4
DDX56
MOK
LOC100287896
LIPT2
CRTC1
KDM8
INTS13
FGFR1OP2
SUMF2
ALKBH5
SLC2A11
PATL1
PITPNB
CBY3
RCBTB2
C19orf81
FAM200B
MAP2K7
PPP1CB
WWP2
YEATS4
SOD2
NOB1
C1orf74
RPL36
MICOS13
HSD11B1L
CDC7
PPP2CA
MRPS18C
HELQ
PTPN4
UFC1
SELENOI
ADGRF3
SLX4
FADD
MRPL45
SPDYE6
LOC100289561
NELFCD
PTK2
TMEM141
CCDC183
CHD1
SAFB2
SAFB
GPI
OARD1
NFYA
OPA1
ZNF576
IRGQ
TRIM37
SRSF1
FXYD3
NPM1
MTCH2
POLR2J3
RBM17
MRPL24
HDGF
FUT8
NANP
RTL10
GNB1L
CACYBP
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
EIF2D
HASPIN
DYNC2I1
OSCAR
NDUFA3
MSL2
HP1BP3
NPAS4
RALGAPB
TOMM20
GMCL1
TDP2
ACOT13
NUP50
SPOP
SNRNP70
THAP5
DNAJB9
EEF1AKMT1
TRMT61B
CCT5
ATPSCKMT
DPF2
AKAP1
THOC3
CCNQ
GATD3B
GATD3A
GDF5
CEP250
SARS1
SRRM1
TMEM139
CASP2
ASNSD1
ASDURF
INTS7
DTL
CRB1
TAX1BP3
EMC6
SPDYE7P
POM121
ACAT2
MAP1LC3B
GH1
FBXO31
CSHL1
CAPZA2
TMEM209
SSMEM1
UNG
ALKBH2
PBLD
HNRNPH3
PPME1
C2CD3
ARFGAP3
COP1
SMIM14
MRS2
NAPG
AP3B1
GRB2
C6orf136
TASOR2
TBC1D5
LRFN3
PRR14
FBRS
SPDL1
RNF149
CCDC106
PDXDC1
KIF5C
WDR13
IPMK
CISD1
DYRK1B
ERCC6L2
GPS2
EIF5A
TMEM70
ELOC
TIGD1
SLC39A7
RXRB
RING1
HSD17B8
EIF4E2
SHBG
FXR2
CDC34
USP10
SS18L2
SEC22C
STS
PUDP
NDUFA8
MORN5
EPS15L1
U2AF2
XPO7
DOK2
UBE2M
RBAK-RBAKDN
RBAK
CHMP2A
CDC5L
PAPSS1
SCAF11
ZMYM4
CDC20
PALB2
DCTN5
HSF1
BOP1
C8orf48
RSL1D1
HINFP
PRELID3B
COL11A2
CC2D1A
C19orf57
SRD5A1
NSUN2
ZNF638
ESRRA
CATSPERZ
WDR18
USO1
TMEM104
NAT9
KIFAP3
SMARCC1
ARPC2
ZNF664-RFLNA
ZNF664
CCDC92
RPS7
TFB2M
CNST
MPC2
DCAF6
SLC25A11
RNF167
PFN1
MTG1
UROS
BCCIP
ZBTB45
SYS1
ICMT
HES3
GZF1
HBS1L
MYL5
ATP5ME
C5orf24
GP1BA
TMEM63B
MRPL14
STYXL1
MDH2
NUDT1
MRM2
THAP11
TMEM43
CHCHD4
TRIP6
SRRT
MORF4L1
C15orf40
MKNK2
DFFB
CEP104
SRCAP
LOC730183
TIA1
PCYOX1
EID1
DSN1
TIGD6
HMGXB3
C6orf89
KCNN1
RBM39
RPS11
RPL13A
CCDC93
SCAND1
MINK1
WDR43
TENT4A
TMEM63A
LEFTY1
ZNF34
RPL8
MAPKAP1
AURKB
NUDCD2
HMMR
DIDO1
SPDYE16
POP7
PUM2
MRNIP
TMEM109
PRPF19
GID8
POLR2J2
CELSR3
ALG8
GOLGA1
ING1
FZR1
CARS2
MAD1L1
DLGAP4
ZNF517
GABARAP
NBPF3
TOPORS
SMIM27
NR1D1
CCDC200
DOHH
FIP1L1
SKA3
MRPL57
NOP14
GRK4
STXBP4
RPL10A
COX11
POLR2J
PUF60
PARP6
AHCTF1
TFAP2A
MARCHF7
CBWD6
TMX1
MAP3K7CL
CCT8
BORCS6
PPAN-P2RY11
PPAN
ANGPTL6
PRDM4
PIAS4
KDM3A
TSEN2
ENDOV
TMEM18
CPLANE2
RNF130
CFAP410
LINS1
ASB7
MBD1