ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478135 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◣ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

NPAS4
MTRNR2L2
MSH3
DHFR
ARL4D
MTRNR2L1
FRG2C
DUX4
MAMDC2
MTRNR2L8
HTR5A
PHRF1
NKX1-1
ART1
RTN3
ATL3
TMEM242
CCDC200
COL23A1
WDR74
STX5
KIF5C
MUC3A
IQSEC3
XKR7
FRG2
LIN28A
DNAJC11
EAPP
ZCCHC7
MAST1
RTBDN
ZNF285
ENOSF1
DHX40
RPL31
INSM2
AIP
EPHA10
YPEL1
CEP295
L1CAM
FAM24A
NUP214
RNF130
PCNA
TMEM230
CDS2
HPCA
ZNF280D
E2F6
BARHL1
RGS19
OPRL1
LKAAEAR1
DRD4
DLGAP3
CPLX2
MRPL40
HIRA
DIABLO
N6AMT1
H4C11
H4C12
H2BC14
H2AC14
MTRNR2L9
ZC3H18
AGBL3
RIPPLY2
CYB5R4
TASOR
TTC26
IL4I1
SRP19
TLR5
FMNL3
RGS2
BTNL9
H2BC15
H2AC15
ICMT
HES3
CELSR3
SRSF7
CCDC116
YDJC
NBPF1
RFC1
CALB1
GLRA1
ZNF74
LAMP1
CTNNB1
TRIM44
NET1
RAP1GAP
H4C9
H2BC11
H2AC11
SCG3
OGDHL
VPS29
RAD9B
LRRC8B
ZCWPW1
PPP1R35
MEPCE
GP1BB
PMS2
AIMP2
MST1
RPP25
GAS8
SSBP1
THAP7
LOC102724770
DGCR6
LUC7L2
FMC1-LUC7L2
FMC1
CHCHD3
WASHC2C
UBE2Q1
CHRNB2
NDC80
METTL4
PIK3R3
HPS5
GTF2H1
LZTR1
FAM111A
RPA2
PSMG1
FH
ERRFI1
ERMARD
SMIM12
EXD1
CHP1
SRSF6
PRMT2
FCMR
TARS3
DPY19L4
DLL3
SERPINI1
PDCD10
NOL7
EPB41L5
XKR9
LACTB2
TASOR2
GET4
MTF2
JMJD1C
REEP3
NKIRAS1
HBA2
HBA1
HBQ1
RPL15
TMED1
NXF1
ATG10
MLH1
EPM2AIP1
SLC16A1
TAF12
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF23
USP14
SRRM3
ZSCAN30
KIAA1958
C9orf147
THAP9
SEC31A
NFKBIL1
DDX39B
ATP6V1G2
FAM53C
CDC25C
P4HA1
ABCA3
TRMO
MAPK8
RTL10
GNB1L
H3C15
H3C14
H2AC19
H2AC18
H4C14
H4C15
LLGL2
TSEN54
CASKIN2
PIAS1
TMEM167B
KPNA2
CERS6
ZNF131
LRP2BP
ANKRD37
CCDC188
PRKRA
PJVK
CA8
MAPK8IP2
H3C6
H2BC8
H2AC8
JAG2
CCT8L2
POLR2J3
WDR36
ANTXR2
DNAH14
PRAME
TMEM139
CASP2
DSTYK
GBA
MRPS33
NOP14
GRK4
CHGB
UBN2
PPA2
ZNF229
NUF2
TATDN3
NSL1
PEX3
ADAT2
MMADHC
PAFAH1B2
DUSP23
GLB1L2
DCP1A
EPM2A
WDR26
SSR3
AGPS
TPR
ODR4
METTL2B
LHFPL5
CLPS
CACNG3
EIF2D
CNOT4
SIGLEC10
H2BC12
H2AC12
TBXAS1
HIPK2
CBX8
TDG
C12orf73
CCNL1
NCOA5
TOP3B
CLTC
CNTRL
H1-2
C5
SNRNP48
VGF
NFE2L2
TEX15
AREG
RLF
ZNF800
SF3B5
ZBTB18
HMGA1
KANSL3
FER1L5
BZW2
ANKMY2
H2BC17
H2AC17
DGCR8
H3C12
MLF1
DHDDS
BMS1
RPS20
H4C2
H3C2
H2AC4
H4C1
PGBD5
LRRFIP2
CAMTA1
NOLC1
MAT2A
FBXO4
TANK
THAP5
DNAJB9
PCMTD2
MKLN1
TMEM191B
SEH1L
COX18
MMAA
SUMF1
C5orf51
MFSD11
SRSF2
GAGE2B
GAGE2A
GAGE7
GAGE5
GAGE4
GAGE2E
GAGE2D
GAGE2C
GAGE12I
DEFB110
MAP1LC3B
FBXO31
MPZL1
NEK2
LGR6
GMNN
DEFB132
ELAPOR2
POT1
TMX4
ZC3H6
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
TRAF3IP3
KCNK12
MAPK1
ARID2
PIGF
CRIPT
TRMT2A
RANBP1
CZIB
POLE4
CD55
VTA1
NMBR
XYLB
SLC35E2A
ARL4A
MKRN2OS
MKRN2
PMVK
CDC73
METTL6
EAF1
IER5
POGLUT3
XPC
LSM3
SLC39A3
CUL5
SELENOH
MTHFD2
ZFR
DDX21
TCF12
UTP11
FHL3
SNAP25
MTF1
GDAP1
EZH2
PPIL2
FAM3C
CPQ
MAP7
TMEM106B
GTF2H2C_2
GTF2H2C
H2AX
DPAGT1
HMBS
AHCYL2
ZMYM6
ARFGAP3
SNRPE
LSM8
MGA
ZBED9
SGF29
EXO1
THOC3
BSG
TUBA1B
USP9X
KIF2A
TCAIM
CITED2
AARS2
RDH14
KAT6A
SAYSD1
PDCD6IP
ANP32B
ADK
KATNA1
ZNF22
SRSF1
ZWILCH
SNAPC5
RPL4
METAP1D
CCT2
CDCA7
SMCHD1
THEM6
EFCAB13
SKAP2
SIK2
CDKN2C
PSMB2
ZFC3H1
THAP2
BLOC1S6
ANAPC10
ABCE1
ZNF398
NUCKS1
LYSMD3
ZNF425
COMMD3-BMI1
COMMD3
BMI1
PPY
ZFP69
REM2
TYW1
SBDS
TNPO1
RAB13
RPS27
FRG1
MED15
CA4
NABP1
SS18
FER
SOD2
LHX9
C1orf53
INTS12
GSTCD
WTAP
RAB37
CSTF3
PHF19
ABCC5
NUP62
ATF5
DNTTIP2
ANGEL2
THNSL1
SNAP29
PI4KA
GHITM
RYBP
JAGN1
CCDC71L
KIF14
MYLIP
SS18L2
SEC22C
NKTR
FAM227B
DTWD1
CENPC
C6orf47
APOM
HLTF
BAG6
NAP1L1
ACBD6
PDE7A
DNAJC6
DCLRE1B
AP4B1
GSTA4
BICD1
PGBD2
C8orf88
PLD6
TTC4
MARCHF8
ANKRD28
SOD1
DARS1
RBM28
ZNF391
HDAC2
TEX46
KDM1A
CDC16
FANCC
NXPH3
KTI12
USP17L22
USP17L21
USP17L20
USP17L12
ZNRF2
ZFP1
IFT57
SETSIP
BTBD8
GLCCI1
SLC17A5
SERPINB9
POU2F1
NFYC
ARRDC3
DNAJB12
UTP3
SRF
NSFL1C
CUL9
BNIP2
MAP3K4
SPO11
UNK
H3-3B
CRKL
EXOG
STXBP3
SLC30A9
DCAF4L1
EIF5A2
NFKB1
PGRMC2
PRDX1
PAXBP1
NMNAT1
LZIC
ARMC1
HAT1
TRIAP1
COX6A1
CHD1
TMEM209
SSMEM1
C6orf89
UBE2D3
PCIF1
SPTLC1
COQ2
MDM4
SPG11
PPIL1
WASL
SMAD5
STAM2
H3C1
H1-1
BRAF
FUS
TP53BP2
RAB4A
AGGF1
ZNHIT3
P2RX6
INAFM2
GOLGA6L10
RSPH14
RAB36
GPC5
TBC1D5
SCAF11
ICE2
EXOSC9
NR1D2
KIAA0895
TAF9
RAD17
AK6
EIF2B3
ANLN
YIF1A
TMEM151A
PPP1R8
SLC25A24
PPM1D
TTC33
ANKRD36
ZNF683
TOMM20
RRP15
NUP54
IMMP2L
BLOC1S5
RBM22
ARL6IP1
GBE1
RANBP3
NRF1
FANCD2
SENP8
MYO9A
KLHL12
PNO1
AHI1
LSM2
HSPA1L
HSPA1A
UBP1
NADK2
SLC25A46
ZNF786
ZNF558
IQUB
OR2L13
OR2AJ1
SIRT5
DHX9
ZBTB37
SERBP1
PUS10
PEX13
MTERF1
DYNC1I2
UCP2
GPR155
CCNC
SUPT3H
CCNA2
MBNL1
COX20
AP1S1
TTC21B
PDXDC1
NUDT1
MRM2
MAD1L1
FAM133B
RANBP2
SLC35B4
PARL
TBC1D15
ADNP
UBE2L3
RPS24
POLR3A
ERAP1
ZFAND5
RWDD3
STX16
CBLL1
RPS3A
KIF15
KIAA1143
POLR3E
PTPRH
ANKRD36C
COA7
HSPA1B
TRIM4
MTPN
LUZP6
RPAP2
GLMN
CEP85L
TMEM184C
CDC20
MAK16
UBR3
METTL5
CSDE1
RSPH3
ELOVL1
TM9SF1
IPO4
INO80
TBRG4
KLHL22
UBE2D2
PSMD14
PET117
KAT14
AGO3
TMEM168
PRDX6
MCCC1
SKIDA1
DTWD2
N4BP2
SMIM10
NUP42
ERI1
SRSF4
RIC8B
OXSM
NGLY1
SPATC1L
RIDA
POP1
PC
LCLAT1
CD33
PBLD
HNRNPH3
SHOX2
RSRC1
CENPE
ARHGEF10
DUSP12
GRM1
MTX2
ZNF669
BPNT2
ZFPM1
DENND1B
DYNC2I1
PSMD5
NDUFS7
SVIP
TCERG1
FBXO28
MTR
MARCHF4
RPSA
ITSN1
CRYZL1
TMEM191C
MNS1
ZNF280A
ECI2
TRIM37
CBWD5
CBWD3
CBWD6
C8orf37
SCGB1C2
SCGB1C1
ODF3
RBPJ
MDN1
RPLP1
ZKSCAN8
ELAVL3
MATN1
TNFRSF21
JPH3
MBTPS1
DCAF10
YTHDC1
MEFV
H3C10
H2BC13
H2AC13
OSBPL9
MCM6
TMEM185B
FIBCD1
HP1BP3
AASDH
MRPL17
TTC14
ZYG11A
RPL5
PHF3
AFF4
NBN
DNAJC10
COPG2
C22orf39
RUFY3
TOR1AIP2
TOR1AIP1
AHCTF1
DMAP1
MED23
HES4
PPFIA3
C19orf73
MVK
THUMPD3
MYO1G
SLC25A51
SREK1IP1
CWC27
DDI2
DARS2
CENPL
ZNF718
ZNF595
NRCAM
MPC2
DCAF6
PUM2
USP30
KCTD16
SLC24A1
YIPF5
PRMT3
PDHB
NAMPT
E2F3
PBX3
CCR4
ITGAV
ZNF280C
MINDY3
NIBAN1
WASHC5
NSMCE2
DNAJC19
EEF1A1
TNPO3
CCDC88A
PSMA1
ADO
GPN2
ATP5MC3
ANKRD36B
ASAH1
UBE2T
PPP1R12B
GOLGA4
LRCH3
GGH
BCAR3
ATF3
PPT1
PTCD2
MRPS27
SERINC3
PKIG
ATG4C
MTMR2
CARD8
ANKRD50
ZBED8
COPB1
SSBP2
PHACTR2
E2F7
ZNF114
ALDH1A2
SPRTN
EXOC8
AATF
SUCO
FANCL
PHAX
ALDH7A1
H2BU1
H2AW
NUP205
CCDC91
PON2
NPM1
LDAH
FAM98B
GOLIM4
CETN3
PYURF
PIGY
HERC3
GNL2
ID1
FANCI
HOMER1
DGCR6L
ZNF862
CLASP2
TDRKH
LCA5
FBXO30
OLA1
OR4F4
PPFIA4
BTBD10
LTV1
TFRC
PKP4
CCDC148
TAF7
PCDHGA1
PUS7
DDX59
RINT1
KDM7A
NR4A2
GPR158
SLC7A14
GHSR
INKA2
DDX20
SMARCA5
SETD5
MRPS16
DNAJC9
PARPBP
NUP37
ZC3HC1
KRIT1
ANKIB1
ZNF397
ZNF670
BTG1
H3-3A
NCKAP1
DNAJC1
TP53TG3F
TP53TG3B
LOC102723655
KCNMB4
TK2
CKLF-CMTM1
CKLF
GTF3C4
DDX31
DDX3X
ZNF292
UAP1
STARD3NL
CDC7
ZC3H15
KANSL1
FBXW2
AP3S1
CRBN
TMED5
CCDC18
DDX50
ZNF596
RIF1
DUS4L-BCAP29
DUS4L
COG5
KDM4D
CWC15
C2orf73
BAZ2B
HNRNPH1
KDM3A
RAD23B
PPP1R11
POLR1H
SPECC1L
GDI2
IPO9
PPP1R10
MRPS18B
ATAT1
RWDD1
RNF39
LYPLAL1
ZNFX1
SMN2
SMN1
TRA2B
HINT3
MFAP3
FAM114A2
IPO7
ZSCAN25
DNAJC16
CASP9
ATAD2B
RHBDD1
DYNC1LI1
NCDN
KIAA0319L
ALDH9A1
C3orf33
PDLIM5
CYCS
HBS1L
ELP6
IFRD1
FAM76B
CEP57
H3C4
H4C5
H2BC7
H2AC7
H4C3
H1-6
PTBP3
RHCE
MACO1
CSRNP2
EIF2S1
ATP6V1D
RAB33B