ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478563 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◣ SRX10478563: Hep G2

◢ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

NPAS4
XKR7
IQSEC3
LIN28A
FAM24A
CELSR3
INSM2
KCNH7
NKX1-1
HTR5A
GLRA1
RAB37
SMIM17
MTRNR2L2
MSH3
DHFR
EPHA10
L1CAM
DLGAP3
MTRNR2L1
MTRNR2L8
WDR74
CPLX2
SST
BARHL1
RTBDN
CHGB
SCRT1
SNAP25
DUX4
SLC12A5
GDAP1L1
NPPB
HS3ST2
MYT1
ANK1
MAPK8IP2
SIGLEC10
RANBP3
TMEM181
SCGN
CHRNB2
PTPRN
LHFPL5
SLC39A3
SEZ6
HES3
DNAJC6
KCNK12
PGBD5
CCDC92B
HPCA
NTSR2
FRG2C
UNC80
AP3B2
CABP7
MTRNR2L9
CHRM4
OGDHL
NRSN1
RBM28
CHGA
ATCAY
ZFYVE27
PTPRS
CDK5R2
VWC2L
GRM1
RNF130
GPR78
KLF11
SPOP
CEMIP
MMP24
SCRT2
RPF1
SCAMP5
SRRM3
PRMT8
PDE1C
PIK3R3
VGF
HMGA1
GCFC2
PTMA
CDIP1
HHATL
SEZ6L2
ASPHD1
TMEM179
PCDH8
ST8SIA3
SLC7A6OS
PRMT7
HTR1A
PLEKHM3
STMN3
RTEL1
KCNH6
UGT1A1
PMS2
AIMP2
CDC16
CCZ1B
LEMD3
POU4F3
MFF
PDE4C
ZNFX1
SPATA25
NEURL2
CTSA
CTNNA2
LOC112694756
CYB5R4
RBM39
LSM12
G6PC3
GTF3C3
S100A8
SCG3
SLC18A3
CHAT
GPR6
DLL3
SLC25A21
MARCHF4
USP30
SVOP
KATNA1
SNTG1
PET117
KAT14
KDM3A
NME1
HDAC2
SNRPB2
NEUROD1
AATF
MUC3A
CENPA
INA
CRH
PTDSS1
MTERF3
INTS5
HEATR5A
SAYSD1
RFC1
PCNA
MNAT1
SRSF2
MFSD11
GPR158
EPM2A
PRDX1
RESP18
NMS
NPDC1
UTP11
SNRPB
FBXL16
SLC7A14
E2F6
CPNE4
SLC9A1
GRIA2
N6AMT1
HRH3
H4C12
EVI5
LRIF1
DTD2
AKAIN1
TOMM22
TMEM107
H4C3
H1-6
PAQR4
KREMEN2
SPINK1
SPR
MAT2A
FGG
SCIMP
DDX1
CCDC200
GOLGA8A
ABCA3
THOP1
SGTA
OGFOD3
HEXD
HDAC4
FAAH
DNAJC11
STK25
FRG2
UNC13A
XKR4
SLC6A5
STAT3
ELL2
PCSK1
CTDSPL
VPS29
RAD9B
TPH2
MRPL39
CCNC
SRSF6
DNER
PSMD3
PMVK
ARFGAP3
DHDDS
POLR2J3
SIRT4
RNASEH1
ZBTB4
SLC35G6
POLR2A
GLS2
EGR4
PRMT5
PDHB
INSR
PCBP3
SCFD1
TCFL5
SLC45A4
TOMM5
GTF3A
ANKRD34C
IKZF3
ZPBP2
NUP54
KCNB1
INTS12
GSTCD
WTAP
SOD2
TTI2
CDCA7
H4C11
PEX3
ADAT2
HES6
HBQ1
HBA1
NDUFAF5
ESF1
NXF1
HCN2
TK2
CKLF-CMTM1
CKLF
DHRS2
ZC3H7A
SKOR1
SNX17
EIF2B4
SLC37A4
AKAP11
RPL31
TRIM67
RAD50
CPQ
FEM1B
ID2
ARL6IP1
WDR45B
WDR36
PTPN6
C12orf57
DNLZ
METTL15
KIF18A
DRG2
BSN
SEC14L1
PRKDC
MCM4
H1-2
RUNDC3A
MED23
RABGGTA
KIAA0895L
EXOC3L1
POLR3D
TAB1
GET4
RRP1B
HSF2BP
IRF9
ACTL6B
LMCD1
TMC7
RUSF1
CTNNB1
CCDC88A
SRP19
AARS2
C14orf93
CDK5RAP1
OPRM1
ANKRD36
ACTR3
ZNF473
VRK3
SEH1L
MAPK11
TUBB3
MC1R
GMEB2
CSTF1
AURKA
PRLHR
STX16
TSEN54
CASKIN2
UNG
ALKBH2
CLUAP1
C16orf90
ZCCHC7
EBPL
GINS3
LCLAT1
ZSCAN12
SMPD3
SPAG4
ZNF165
GGACT
NSFL1C
GPRIN1
SF3B6
FAM228B
TMEM186
PMM2
TBC1D13
MEST
TSFM
DGAT2
FMNL3
PSMD5
GINS1
RPL27
RPS7
TIGD1
NR1D1
EIF4E2
SNRPD1
EIF3B
PBX3
TTC26
KANSL3
FER1L5
FAM227B
DTWD1
COG7
RAB10
RRBP1
CCDC107
CPNE9
BMS1
GARS1
MRPS15
HMGN3
FAM237A
PHF20
RAB11FIP4
GJA10
RPS6
CLVS1
CTXN2
C4B_2
C4B
TNXB
SMARCD2
VPS25
MLXIP
LRRC37A3
CNPY3
TEFM
SLBP
ACSL6
NCBP3
CLN3
APOBR
YTHDF1
CERS6
FN3K
PTP4A2
RIOK2
NSUN5
TRPM8
HLTF
EIF4A2
PCK2
NRL
ZNF23
IMPDH2
RBBP5
REX1BD
DHX40
BAIAP2
TEX14
RAD51C
PCSK9
IPO4
ABCC6
HSPA1B
PXMP4
NOP14
GRK4
TINF2
FAM187A
EFTUD2
CCDC103
POLE4
HHIPL1
CCDC85C
RNF103-CHMP3
RMND5A
BRINP1
MTERF4
UGP2
USH1G
OTOP2
FAM177A1
LRP2BP
ANKRD37
H3C3
H2BC3
GGA2
WDR35
NDUFAB1
DPP10
H4C4
TBL3
TRIM44
SLC35A3
EZH1
TMEM268
UBE2Q1
STX18
LRRC59
PDE11A
SAMD10
PRPF6
RBM45
NUF2
STARD13
MDH1B
FASTKD2
SDHD
RPL10A
EPB41L4B
SPHK1
NUS1
MTF2
TNFAIP1
IFT20
MFAP3L
LRP6
RHOB
CCL16
VARS2
FUS
KCNH4
RPS2
RNF151
PEX5L
GRIN1
CDH23
KIF18B
NDUFS7
MED31
C17orf100
DHRS4
ATF7IP2
FAM163B
DLX2
ZNF292
FRG1
USP7
BICDL1
FAM98B
SHF
POLR2J
C8orf37
NOC3L
LTB4R
CIDEB
TAF5
POLR3E
HSP90AB1
RBL1
OSTM1
CEACAM5
SLC35G2
PSMF1
AURKAIP1
RSPH3
SLC25A10
MRPL44
LDAH
EAPP
KCNC3
SNAI1
ITPA
DDRGK1
RGPD2
RGPD1
MYORG
C9orf24
NCAN
SAR1B
SOGA3
LATS1
PDCD2L
ODC1
MRPL21
IGHMBP2
PNPT1
MTIF2
H3C12
H2BC17
H2AC17
CALM1
SYNJ1
LANCL1
GLS
CPS1
TIA1
FURIN
ARL14EP
ISM1
DUS2
DDX28
PRR3
GNL1
TP53RK
SLC13A3
CMTR2
DCP1A
ZCCHC3
CEP295
COPS7A
LTV1
DNAJB3
ZNF624
UQCC3
NEU1
LBHD1
H4C14
AXIN2
DAXX
MAP1LC3B
FBXO31
DAGLA
MRPL3
MRPS10
ESYT3
NANP
DRAM1
RPL13
C5
CNTRL
HCRT
ACTA1
MARCHF11
DCLRE1B
AP4B1
HAL
CTF1
BCL7C
EBAG9
TRAPPC6B
PNN
H2AX
TOB2
METAP2
PTCD3
POLR1A
VAMP5
SPG11
C10orf88
OSBPL6
TBCD
CCDC83
CCDC117
LONP1
CATSPERD
COMMD1
MRPL45
TAF6
CNPY4
R3HCC1
SLC7A6
HUS1
TM9SF4
OSGEPL1
RPLP0
RBM34
NUP62
IL4I1
ATF5
FABP1
UQCC2
KIZ
POLR1H
ANKRD40
RGS20
VPS16
POLR2C
PCED1A
ATR
GADD45B
MST1
SRARP
SNRNP200
TRIM33
CMTM3
C6orf136
MRPL58
USP14
MAN2C1
PGRMC2
BOLA3
DIMT1
SMIM12
NDUFB3
FAM126B
TASOR2
ANO10
ABHD5
SMC3
UGT2B10
TRMT2A
RANBP1
DUS3L
E2F3
ACAD9
UCKL1
SLC16A3
ARFGEF2
AKR1A1
TM2D1
TMEM200A
SAMD3
HBS1L
TOR1AIP2
TOR1AIP1
H4C5
GRIK2
SCAND1
CFAP65
WASHC2C
G2E3
ZNF598
CACNG3
SNAP47
JMJD4
TCTEX1D2
SHH
TM9SF1
FDXR
RRN3
TMA16
NEK3
ATP5F1E
NOB1
WDR6
ADNP
H4C2
H3C2
MCM6
PIGL
NCOR1
EIF2D
POLDIP3
NBPF1
H2AC4
SRRT
GLO1
CFL2
CYP21A2
TACO1
TOMM34
DUS1L
SLC17A9
PPY
PTGES3
CARMIL3
LTB4R2
STEAP1
APOA1
TASOR
ADCYAP1
RAD9A
NEPRO
GHSR
HSPA5
DNMT3A
SCN3B
ZFR
DRD2
BSX
CITED2
GATAD2A
SNF8
FAM83D
TSG101
MLANA
SYNM
HERPUD1
GRB7
SLC25A36
TBX10
ITPR1
RPS27L
SETD6
CCT4
XKR9
LACTB2
TSGA10
VMP1
PTRH2
MEX3D
NOP56
PSME3
SELENOW
EXOSC6
MRNIP
TMEM222
ZNF264
CBWD5
CBWD3
MOB4
RPL29
BRMS1L
NHLRC1
GFM2
TOM1
UTP14C
RNF227
ZGPAT
ARFRP1
NELFA
APOB
PLS1
SKP1
PGAP2
NUBPL
SPTSSA
ZSCAN30
EFCAB13
DNPH1
DHRS4L2
AGGF1
UBL7
ZNF148
ARSG
PSMD7
VRK2
GRM4
CHID1
SLC39A4
CPSF1
NEK2
THOC5
CSF3R
PBRM1
GNL3
NID1
NOL10
MRPL16
AK2
LOC110384692
C4A
XYLB
MRPL30
MITD1
GTF3C6
SUGCT
MPLKIP
C20orf144
ACTL10
SH3YL1
ACP1
MRM3
GLOD4
FAM53C
CDC25C
NUDT3
RABL2B
NOL7
HECTD1
MAVS
CTR9
IPMK
CISD1
ALG1
CPPED1
PSMB6
NME3
MRPS34
EME2
TMEM101
STT3B
PGGT1B
SH2D6
ARHGAP40
PAQR7
ZHX2
C19orf53
LUC7L
SERPINA11
SULT1A4
SULT1A3
OTOS
COPS9
CC2D2B
LIG3
TMEM230
ANKRD36C
ABCB6
ZBTB40
SRP54
DPY19L4
NPM1
SGF29
NFE2L2
RXFP3
PVALEF
DNAH7
ATP2B2
AATK
EIF3F
PAXBP1
MCAT
DMAP1
PRRT2
MAZ
IL17RC
PSMC3IP
USP42
CWC25
TFB1M
ABCF1
MTCH2
EIF4G2
SSNA1
ANAPC2
TNFRSF10D
ZNHIT3
DIABLO
LGALS13
AKAP10
NR1H2
GUSB
KNOP1
CHRDL2
RPS3
STK4
SCAPER
TMEM106B
MEIG1
DCLRE1C
PSMD8
TMX3
CCDC102B
ANAPC11
ALYREF
ZNF571
ZNF540
ID1
ZKSCAN2
LOC100287896
LIPT2
CARTPT
H3-3B
GTF2H2C_2
GTF2H2C
UNK
H4C8
BCL7B
SLC44A1
ZNF3
TTI1
RPRD1B
CCDC88C
C16orf72
FBLL1
SLC17A6
CCDC126
NCAPH
PDRG1
DDX19B
IL1R1
AARS1
NR1H3
ACP2
UTP3
XRN2
MSH5
CLIC1
FAM133B
U2SURP
UBOX5
FASTKD5
NBAS
PDCD7
TRADD
HSF4
FBXL8
TRIL
CACYBP
BNIP1
PARN
BFAR
YIPF3
POLR1C
CSNK2A1
RAD54L2
ADAM22
CRLS1
AIP
NCL
ZBTB8OS
RBBP4
SRSF5
PRORP
PPP2R3C
NAE1
TRMT61B
PRRT3
OSBPL8
B2M
LAMTOR5
DDX18
ZBED9
EBNA1BP2
CFAP57
PHYHIPL
DNAH14
DGCR8
AFF1
RNF40
PSMC4
CCDC189
URGCP
UBE2D4
ERLIN2
AAR2
FANCL
RNMT
FAM210A
CLCN7
RPS20
EIF2AK3
TOR1A
GNPNAT1
B3GNT6
DIDO1
RANBP2
TARS2
THUMPD2
GID8
CD320
SLC12A6
NHEJ1
ADAM17
ARL4D
LCMT2
ADAL
NUTM1
NOP10
PPP1R3E
SULT1A1
CTSO
CHCHD2
COX16
ENO1
EEF1AKMT1
PARL
COQ8A
ZNF296
GEMIN7
LDHA
LHX3
TMSB10
NOP58
YARS1
S100PBP
ALDOA
SRSF3