ChIP-Atlas: Target genes

Potential target genes for NKX3-1

Query protein: NKX3-1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10478564 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
NKX3-1's Target genes

◢ NKX31: Average

◢ SRX10478563: Hep G2

◣ SRX10478564: Hep G2

◢ SRX062357: LNCAP

◢ SRX062359: LNCAP

◢ SRX180379: LNCAP

◢ NKX31: STRING

XKR7
NPAS4
LIN28A
IQSEC3
INSM2
NKX1-1
FAM24A
CELSR3
L1CAM
HTR5A
GLRA1
KCNH7
RAB37
EPHA10
CPLX2
DLGAP3
SMIM17
MTRNR2L2
MSH3
DHFR
SCRT1
RTBDN
CHGB
MTRNR2L1
BARHL1
MTRNR2L8
SST
WDR74
SNAP25
DUX4
RANBP3
HES3
MYT1
ANK1
LHFPL5
MAPK8IP2
SLC12A5
GDAP1L1
HPCA
TMEM181
KCNK12
MMP24
DNAJC6
NPPB
SRRM3
FRG2C
NTSR2
SCRT2
SEZ6
SIGLEC10
GCFC2
CHRNB2
PTMA
PCNA
GRM1
USP30
SVOP
CYB5R4
CHRM4
RAB11FIP4
CCDC92B
KDM3A
SLC39A3
SCGN
PTPRN
LEMD3
HS3ST2
CDIP1
VGF
CABP7
OGDHL
RNF130
NRSN1
MUC3A
ODC1
STMN3
RTEL1
UNC80
SLC7A6OS
PRMT7
KLF11
HMGA1
PDE4C
BICDL1
PGBD5
CEMIP
HBQ1
HBA1
IKZF3
ZPBP2
SCAMP5
MTRNR2L9
ZFYVE27
DLL3
VWC2L
N6AMT1
PMS2
AIMP2
PDE1C
CHGA
PIK3R3
CDCA7
CCDC200
PTPRS
TRIM44
PTP4A2
PRMT8
FBXL16
MFF
HDAC2
FUS
SPHK1
HHATL
THOP1
SGTA
SEZ6L2
ASPHD1
PROCR
TASOR2
SLBP
CPNE9
DHDDS
LCLAT1
AP3B2
GPR78
EGR4
SLC18A3
CHAT
CTNNA2
HES6
FRG2
EVI5
RFC1
TEX14
RAD51C
GPR6
NEUROD1
TMEM179
NOC3L
RAMAC
TIGD1
NR1D1
EIF4E2
GTF3C3
GJA10
KCNH6
PAQR7
CTF1
BCL7C
CTDSPL
DIABLO
TPH2
DNAJC11
RESP18
SCAPER
HCN2
OGFOD3
HEXD
POU4F3
ATCAY
LGALS13
SMARCD2
TINF2
EFHD1
HRH3
KATNA1
RPL31
BCL7B
H4C11
ZNF473
VRK3
PET117
KAT14
LTB4R
CIDEB
SLC7A14
SPOP
RBM28
GDI2
SIRT4
LOC112694756
URGCP
UBE2D4
ACSL3
SLC9A1
SCG2
LRP6
TMEM242
TRPM8
MYORG
C9orf24
RNF227
GPRIN1
CEP295
TMEM107
PRKDC
MCM4
E2F3
H4C14
TOMM34
COPS6
H4C3
H1-6
H4C12
PODXL2
MARCHF4
TM9SF1
TTI2
SMPD3
USP14
PDHB
TMEM268
PRRT2
MAZ
PMVK
FAAH
LTV1
ARSG
ADCYAP1
PSMD3
SRSF6
CRH
MAT2A
ARFGAP3
PLEKHM3
SLC45A4
UGT1A1
WDR36
AATF
NEK3
CDK5R2
RNASEH1
HDAC4
DHRS2
SPAG4
MOGAT1
EIF4A3
PRMT5
NCAN
SUPT3H
WTAP
SOD2
RBM39
RAD50
MEX3D
HECTD1
AKAP10
TTI1
RPRD1B
E2F1
H4C2
H3C2
NMS
DDX1
TSEN54
CASKIN2
PHF20
SCG3
POLDIP3
IL17RC
FGG
GGACT
PTDSS1
MTERF3
SNRPB2
CDC16
VRK2
MRPL3
EPM2A
MED31
C17orf100
SEH1L
RNF103-CHMP3
RMND5A
ARHGAP1
MTF2
DNER
RGMB
ZBTB4
SLC35G6
POLR2A
CCDC88C
HTR1A
H3C12
H2BC17
H2AC17
GRIK2
S100A8
UTP11
BSN
H4C15
TOB1
ESYT3
MDP1
CHMP4A
KCNH4
HCRT
SEC14L1
RIOK2
EPHX2
PCDH8
RGS20
CENPA
ABCA3
RSPH3
NID1
PTPN6
C12orf57
ANKRD36
RTN2
PPM1N
UTS2R
CCDC107
CC2D1A
C19orf57
DPP10
ANKRD36C
GRM4
UNC13A
RABGGTA
CLVS1
GPN1
CCDC121
SH2D3C
GTF3A
ELOVL3
KIAA0895L
EXOC3L1
MVD
TMEM106B
HSP90AB1
NME6
LRP2BP
CCNL1
ANKRD37
ZNHIT3
DNA2
HBM
HBA2
ATP6V1B2
SNRPB
NANP
C16orf72
AIP
MPPED1
NSFL1C
APOLD1
POLE4
NOP56
SLC25A21
LRIF1
NDUFS7
ID2
KIFC1
HLTF
FANCL
POLR2J3
NOP14
GRK4
RPLP1
FANCD2
SYNJ1
CFAP65
SRSF7
TSPAN10
NPLOC4
SNTG1
PCSK1
ANKRD34C
CTXN2
DHRS4
NCL
CTXN1
SYP
SNAPC2
CEACAM18
SCIMP
H1-2
MAPK11
PRRC2B
NBPF1
ANAPC11
ALYREF
EBNA1BP2
CFAP57
ZNF131
LRRC59
SCGB1D2
E2F6
ACSL6
GET4
CITED2
DTD2
HHIPL1
CCDC85C
H4C4
KRI1
CDKN2D
GLUL
THUMPD3
CFDP1
TERF1
MNAT1
NPDC1
NAGK
ZNFX1
NDUFS3
KBTBD4
ATP5F1E
ZMYND10
NPRL2
CYB561D2
PGRMC2
HIRIP3
SLC25A3
RRP1B
HSF2BP
EIF2B3
CNPY3
REX1BD
SPTSSA
KCNC1
NME1
EBAG9
ISM1
GRIA2
XKR4
NELFA
ZNF337
PRG3
DDX5
CEP95
DUS1L
BRMS1L
RPS13
GPCPD1
EIF2D
MCM3
P4HA1
ANO10
ABHD5
H2AC4
ZCCHC7
ATF7IP2
OSCP1
SLC24A1
TASOR
TEFM
ABCC11
IPMK
CISD1
LONP2
ST8SIA3
FTL
PRDX1
CERS6
SLC25A10
RTTN
ID1
PBRM1
GNL3
ABCC6
H3C3
H2BC3
ZNF579
C5
CNTRL
CCDC83
RPF1
NR1H3
ACP2
NXF1
FOXJ3
TIMM21
FBXO15
CPNE4
AKAIN1
LUC7L
TAS1R3
SLC3A2
TK2
CKLF-CMTM1
CKLF
PRLHR
COX18
H2AX
PHETA2
NAGA
THNSL1
C14orf93
LMCD1
HERC3
TRAPPC6B
PNN
INSR
MTERF4
UCKL1
PYURF
PIGY
MIA2
EIF3CL
EIF3C
CCZ1B
CALM1
ZCCHC3
NOLC1
GATAD2A
ZNF280D
C7orf25
H3-3B
TMA16
PSMC3IP
TMEM14B
FEM1B
NOL10
ALG1
ZNF628
GINS3
STX16
ACTA1
ABCB6
COQ8A
MYBL2
OTOA
SMAD2
MRPL44
FRA10AC1
TANK
PNPO
MOCS3
DPM1
PITRM1
CDK5RAP3
SLC17A9
CHID1
EPOP
JPT1
CKMT1A
CMTR2
HNRNPAB
SAR1B
NUP62
IL4I1
ATF5
SLC39A4
CPSF1
SUPT7L
SLC4A1AP
H3C15
H3C14
H2AC19
H2AC18
UBE2S
EXOC2
GOLGA8A
MARCHF11
RAD9A
ZNF629
SCGB1D4
GJD2
GFI1
CALB1
CDK5RAP1
NSUN5
MEIG1
DCLRE1C
RUNDC3A
FAM163B
EFCAB13
PKM
INA
SLC44A1
ZNF296
GEMIN7
STAT1
TPRA1
PSTK
RPL27
CYP21A2
LSM12
G6PC3
OPRM1
METTL2A
SRSF2
MFSD11
TRIM67
TUBB1
KCNIP2
DIDO1
TP53RK
SLC13A3
HEATR5A
FN3K
LDAH
PPY
ZKSCAN2
GID8
MAP2K2
KIAA1586
PPP1R3C
RETREG2
CNPPD1
POLD2
DDIT4
VPS29
RAD9B
FURIN
ELAC1
DCP1A
ACTL6B
FBLL1
SLC6A12
RANBP2
PBX3
C10orf88
CPPED1
C17orf75
RIF1
DDX56
BBC3
INTS12
GSTCD
MSH5
CLIC1
FAM133B
GLS2
TUBGCP3
UGDH
SPRYD4
CDIN1
KANSL3
FER1L5
CCDC117
C19orf48
FERMT1
ZC3H7A
ATIC
HAUS4
ZNF770
CENPS-CORT
CENPS
YDJC
CCDC116
TFRC
SSTR5
RPS19
FAM151B
DISP3
EBPL
NOL7
MLXIP
HINFP
FOXRED2
RIOK1
CAGE1
TEAD3
TXNDC5
KIF2A
ARL17B
ARL17A
ACAD9
VCPKMT
ANKHD1-EIF4EBP3
ANKHD1
DGAT2
HSPA1B
LDHA
POU4F2
MBTPS2
RPL10A
NDUFAF5
ESF1
DLX2
SNF8
CNGA3
PYCR1
RXRA
CPE
LAPTM4B
PIGL
NCOR1
PSMF1
CPQ
NQO2
ERCC6
ECSIT
NUP54
TOMM5
EAPP
LONP1
CATSPERD
SMC3
USP42
COA7
NET1
METAP1D
KCTD13
TAF3
ELOVL1
ACY1
TRIM48
TMC7
CD320
LHX3
CYGB
CETN3
TGFBI
STX18
GTF2H2
KRR1
H2AJ
THUMPD2
GOLGA4
DUS2
DDX28
H4-16
CAMTA1
SLC35A3
SNRPD1
DUS3L
SCFD1
DHX40
WASHC2C
SMAD5
UBE2V2
SPRYD3
MRPL58
TBC1D19
SRP19
AXIN2
CLCN7
SLC25A36
KCNB1
SRP54
YIF1A
TMEM151A
PHF1
STXBP1
IGFBP4
CTNNB1
MCAT
AAR2
AARS2
GGA2
FABP1
TSN
RTL10
GNB1L
NFATC3
GDAP1
TIMM22
TCF25
PDP2
GTF2H2C_2
GTF2H2C
MARCHF8
ARL6IP1
MTHFD1
RPIA
TBCB
POLR2I
OVOL3
JAGN1
YTHDF3
TIAL1
SH2D2A
NTRK1
STAU1
DDX27
TOB2
PSME3
IPO7
AK2
GTF3C6
MCL1
ARL6
CSTF1
AURKA
SPATA25
NEURL2
CTSA
TACO1
TRIP4
HNRNPH1
ZNF391
MOB4
SOGA3
UQCC2
SLC17A6
MRRF
TUBA1B
OR1E1
GPC6
NGDN
MRPL27
EME1
RPL21
POR
HAAO
FANCA
DNAJB2
BCDIN3D
XKR9
LACTB2
PNPT1
DPY19L4
VPS13A
GINS2
UBE3B
KCTD10
USP4
ZNF556
SFI1
FN1
EIF2B5
DBI
C2orf76
BAIAP2
H4C5
STK25
PUM2
SCAND1
DNLZ
NPM1
FAM120B
GOT2
ZNF248
CBFB
SRSF1
BCKDK
TTC7A
PTPRK
PGLS
MCFD2
GADD45A
EPB41L4B
MSL2
HASPIN
C4B_2
C4B
LOC110384692
C4A
GUSB
RPL3
SMIM26
TGOLN2
TIPIN
GMEB2
COPS7A
WDR11
TJAP1
AGMAT
CHEK1
ZNF195
GPX1
FOXQ1
LTA4H
CBWD5
CBWD3
C2orf73
PTEN
KLLN
RPL5
PIMREG
METTL3
PSD
FBXL15
EZH1
PCSK9
MFAP3L
EIF2S2
RIOX1
EIF3A
ZNF593
ZC3H11A
ZBED6
PTPN2
C1orf232
OPA1
METTL2B
EIF4A2
MAPKAPK3
RHOB
KCNC3
NEPRO
KIAA1191
ARL10
DUSP7
ATP5F1B
C16orf46
NUP93
EDC4
CISH
B3GNTL1
MGST3
VPS52
RPS18
TMX3
CCDC102B
SELENOP
MVK
STXBP5L
B3GALT4
AMZ2
CDKAL1
ATP5MC2
ZNF487
BTBD10
ANKRD39
SRFBP1
SPG11
ZNF219
TCFL5
CALM2
MTIF2
METAP2
HESX1
APPL1
EEF1AKMT2
KRTAP3-1
MCM6
RPS7
ACIN1
ATXN2L
MTHFS
UBE2Q1
FAM83D
GOLGA7B
DIP2A
PC
AHI1
RUVBL1
POLR1F
IDH3B
PLD6
EEFSEC
YWHAQ
UBC
NSG2
GUCY1A2
DPH2
CMA1
SF3B5
IER3
FAM98B
MAN2C1
DAXX
RPS15
CSE1L
UTP18
MBTD1
FLOT1
CDKN1A
ELF3
TIMM44
SNRNP70
TTC30A
LSR
RPE
CCL16
SLC16A3
ACYP2
PDS5A
CLN6
ANKAR
HM13
OPRL1
LKAAEAR1
LARP1
FASN
TDRKH
THUMPD1
TMEM186
PMM2
UBB
SUGP2
ARMC6
PLLP
PCNX4
BIRC6
OXSM
NGLY1
PRPSAP1
C16orf95
ZNF92
EDEM2
CYCS
CCNC
TM9SF4
EIF3B
MIS18BP1
VARS2
COMMD1
ALDH7A1
KHSRP
EEF2K
AHCTF1
WDR55
DYNLRB1
AGPS