ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11525509 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◣ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

WDR74
MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
SNX16
MTRNR2L8
ADAMTSL1
CABCOCO1
FRG2C
TNFRSF19
COL23A1
SPATC1L
SP2
H4C14
H4C15
FRG2
H4C11
CLPB
MUC3A
KATNB1
DDX23
BOD1
NAV3
SLC8A1
EVI5L
VPS50
HEPACAM2
UNK
H3-3B
DNM2
TMEM115
CCDC200
H4C3
H1-6
CHMP4B
CDCA3
TCEA2
DDX49
COPE
IFRD2
RWDD1
SP1
TBL1X
EHF
PHF12
FBXL19
H2BC4
H2AC6
FEM1A
THRAP3
MAPKAPK5
POLR3F
DZANK1
AP2S1
H4C2
H3C2
WDPCP
MDH1
TSN
FAP
ARID5B
IRF2BP2
PAFAH2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SCNM1
LYSMD1
GALM
CIC
TSNAXIP1
RANBP10
PRCC
ST3GAL2
KHSRP
YJU2
RBBP5
PHB
SUCLG1
RPS20
MRPL24
FAM168A
BANP
NEBL
ID3
ARID2
TEPSIN
NDUFAF8
PEX14
DFFA
RFX1
CCDC90B
SMPD3
TSC2
NTHL1
RAG2
IFTAP
OR4M1
LRRC29
PPRC1
NCLN
CALR3
C19orf44
NUDCD1
MMACHC
TOM1L2
DRC3
PAK1IP1
C6orf52
RAB5B
ZFYVE1
ANKHD1-EIF4EBP3
ANKHD1
PPP1R12B
GSPT1
ORMDL3
OR4Q3
HNRNPC
SPSB3
NUBP2
LRCH4
FBXO24
INVS
ERP44
GATB
PES1
COMMD9
SLC25A25
NAIF1
VIPAS39
AHSA1
PEMT
NDC80
METTL4
MTOR
RPS3
ZNF17
CCDC146
COX16
PIGL
NCOR1
ING4
PANK4
HES5
BMF
ZNF417
SPAAR
ID1
HRCT1
PRR14
TMEM11
PNKD
AAMP
SP5
SRSF11
LRRC40
INTS1
C16orf91
EMILIN1
STIP1
OSBP
SF3B6
FAM228B
BUB1B
ZNF608
NUP107
KHDC4
PIN4
ZNF268
GPR137
MED27
GUF1
DDX41
NOP16
HIGD2A
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
GSK3A
GBA
ZNF547
TRAPPC2B
TARS2
TACO1
INTS9
HMBOX1
TTI2
DYNC1I2
TFPT
PRPF31
TULP2
NUCB1
TBL1XR1
TMEM70
ELOC
LARS1
MTRF1
CNIH4
TMEM242
RPS7
ZFPL1
TMEM262
CDCA5
SNX17
EIF2B4
EXOC3L1
E2F4
NOC4L
DDX51
GTF2H4
SCAF1
RRAS
RCAN1
RANBP2
SF3A3
PNPLA6
SYMPK
FOXA3
ZNF687
ZNF211
RPL32
CYCS
C19orf53
TM4SF18
NUDT13
SLC39A1
CRTC2
H4C12
NEDD8-MDP1
NEDD8
GMPR2
UBQLN4
LAMTOR2
ZNF165
ZCCHC4
TSSC4
STAM
KBTBD6
PHB2
TBP
SSBP3
PSMB1
TMTC3
CEP290
ZSWIM3
ACOT8
COX7C
CCNL1
TIMM21
FBXO15
FCF1
AREL1
STK25
ABT1
H4C5
H2BC7
METTL3
EMC4
NUP205
COMMD1
CCT4
ATG4C
MRPL11
CAND1
DMAC1
TBL3
TNFRSF12A
THOC6
HCFC1R1
PSMB6
NDUFAF5
ESF1
WDR46
PFDN6
ZNF337
TCERG1
BUB3
ZNF628
ZNF225
MICOS13
HSD11B1L
RPS6KB2
MRPL30
MITD1
NDUFS3
KBTBD4
NUF2
NR6A1
SEC11C
ZCCHC8
TMEM107
SMG8
MRPL28
SHPK
CTNS
NFKBIL1
ATP6V1G2
TRIP10
GPR108
DDX39B
OAZ3
MRPL53
SPHK2
RPL18
FAM83E
GTF3C3
SSBP2
ZC3H12A
NDUFB5
MRPL47
MEIS1
NFIB
PSENEN
LIN37
KRT15
RHOT2
USP17L22
USP17L20
TOR1AIP2
TOR1AIP1
SLIRP
ALKBH1
GSTO2
SMARCAL1
ZFYVE19
DNAJC17
PSMD11
ANAPC5
VWA5A
HEMK1
C3orf18
ZNF383
NPRL2
CYB561D2
ATP5MG
ATP5F1B
C12orf43
RPL14
HDAC9
SIRT4
ZSCAN22
UBAC1
AK2
SUFU
ACTR1A
TRDMT1
TATDN3
NSL1
ZMAT2
VRK1
GOSR2
PSMC5
FTSJ3
POLDIP3
CTU1
VPS25
PPP1R12C
SLC35E2B
UFD1
CDC45
UBR2
TMEM94
NLK
PRRG2
NOSIP
STT3A
PSPN
ALKBH7
SEL1L
SMARCD2
CCDC174
SLX4IP
MKKS
ATP6V1G1
FARSB
PEX3
CA11
ADAT2
KCTD5
SSR3
UFSP2
C4orf47
ZNF444
AHCYL2
CDK5RAP2
ZNF140
ZNF286A
SIRT2
NFKBIB
MRPS7
GGA3
RPL37
C1orf159
PTDSS2
RABL2B
VCPIP1
C8orf44-SGK3
LSG1
FAM187A
EFTUD2
CCDC103
CRADD
FASTKD1
SEC13
TIMMDC1
HEXIM2
NMT1
DCAKD
SUGP1
MAU2
TRAPPC3
G3BP1
TMEM60
PHTF2
CLN3
APOBR
ZNF773
HEXA
ZNF691
KRT23
ARHGEF1
TLE3
ZNF548
RARB
FLAD1
LMAN2
AURKAIP1
CCAR2
C8orf58
HEXB
BAHCC1
EXD2
ZNF500
CD2BP2
MT2A
TSNAX
BABAM1
ZC3H10
RPL41
UBC
PDE6D
COPS7B
COX7A2L
RPIA
ZNF776
NME1
TBC1D10B
MYLPF
SMAD3
COPS7A
VEZT
FGD6
DLGAP1
C19orf67
RPL18A
SART3
ISCU
FBXW11
CENPA
ZNF143
SUPT7L
SLC4A1AP
TRAF7
ZNF335
EMCN
KRR1
RBM25
SUPV3L1
METTL26
SNX15
SNX1
CIAO2A
PITX3
GBF1
TXNRD1
CACTIN
H4C8
ZNF226
LTN1
SLC35B1
MRPL20
PWWP2A
TMEM63C
SCRIB
EIF3F
EXOC4
DYNC2I2
RNF121
LOC100133315
CTDP1
ZNF688
PEX2
EIF2AK3
TXNL4B
DHX38
TPRKB
EXOSC6
ZNF235
MRPL21
IGHMBP2
SECISBP2
METTL25
CCDC59
ZBTB45
SCYL3
PABPN1
THYN1
ACAD8
UTP3
SRD5A1
NSUN2
NTMT1
C9orf50
RPGRIP1L
FTO
CCDC124
SULT2B1
ZNF175
PAXBP1
DHX8
EXOSC5
BCKDHA
RGPD2
RGPD1
MTRNR2L9
FRMPD4
RNASEH2A
PRDX2
VTI1B
MAMDC2
ZBTB38
DSTYK
REXO1
ISY1-RAB43
ISY1
RAB11B
SSBP1
C19orf48
HNRNPL
GDE1
CCP110
NPAS4
MTRNR2L10
NDUFS7
EMILIN2
PRICKLE3
ING3
SEC61B
UBE2I
ZNF576
IRGQ
PCM1
IPO13
RPS27A
CLHC1
POLR2E
HNRNPUL1
CAPN15
SLC25A20
RPL9
RBL1
LIAS
STK36
RNF25
PHF19
FNDC3A
TRMO
TRIP4
PPP6R1
PPP5D1
CALM3
OPRL1
LKAAEAR1
TMEM160
AP2M1
TOP2A
EPS15
STAM2
IARS2
BPNT1
TRAPPC6B
PNN
CCL3
SYT7
SLC39A9
PCBP1
ERH
RPAIN
PRORP
PPP2R3C
NUP88
H3C15
H3C14
H2AC19
H2AC18
INO80C
GET3
SLC25A19
NDUFB3
FAM126B
H4C4
USP30
JOSD2
CSDE1
ASPDH
WDR97
MAF1
TMEM109
BRWD1
SESN1
CEP57L1
USP48
TM9SF4
RPL35A
IQCG
RABAC1
GLIPR1L1
CAPS2
RPL27
TRAPPC9
PTEN
KLLN
INTS10
UBE2J1
PNISR
MRPS23
SF3B3
COG4
MYOM2
GABPB2
XAB2
PCP2
PMF1-BGLAP
PMF1
GORAB
ARHGAP17
TJP3
NR1H3
HSPA9
ACP2
SREK1IP1
CWC27
ZSCAN5A
SIX1
PNKP
COMMD2
CDCA8
C1orf109
ARHGEF2
NVL
BMERB1
UTP11
ENPP4
CLIC5
LTA4H
KLHL29
TOMM40L
DENND1B
APOA2
ALKBH3
KLF2
PROSER3
HSPB6
TRIM55
ATP2C1
STX16
XPNPEP3
ST13
KLF6
FUT10
TEKT2
ADPRS
MRPS18C
HELQ
RAP2B
HBP1
C1orf198
NGB
GCLC
LNPEP
MDM2
MCAT
ABCF2-H2BE1
ABCF2
ADO
SCT
CDHR5
ACTL6A
ZNF56
RUFY3
RTRAF
RTF2
PEX26
PEAK1
HMG20A
CXCR5
CCL5
CCDC39
TMEM256
NLGN2
TTC33
TGIF1
MDM4
SMCO1
ZPBP2
IKZF3
NCOA7
MNT
KAT6B
SNRPB
VPS52
RPS18
ILF2
NUP153
NDUFC2-KCTD14
NDUFC2
NAT16
HCAR3
CHST12
RIIAD1
MAP2K3
KDM6B
IRF2BPL
CELF3
ANP32C
KMT2C
EML2
DPP9
BTRC
POLG
PARP2
LAMP1
FGG
CRYAA2
CRYAA
RGS8
MACC1
DHX33
AP1G1
ZNF384
SKA2
PRR11
PHC2
KANSL3
ID2
FER1L5
TJP1
MRPL1
DCP1B
UBE2H
DRAP1
C11orf68
PXMP2
POLE
LOC102723996
ICOSLG
USP3
COPS8
CCM2
RPS13
LAS1L
HSD11B1
CDYL
CDC20
PSMD4
OR6B2
NDUFA10
MED23
LIME1
WHAMM
RABL2A
FSD2
TRIM48
STMN3
RTEL1
FMO4
CWC25
TP63
TMEM79
SMG5
RBM42
MARS1
BBX
ARHGAP9
UBB
FOXK1
FAAP24
CEP89
RPS23
LEFTY2
CMSS1
ATP6AP1L
WDR83OS
WDR83
MAN2B1
HOOK1
FDPS
AQR
RAD51AP2
MRPL44
C2orf42
ZNF565
ZNF146
TPST1
TMEM143
SYNGR4
RAD51AP1
FAM156B
FAM156A
C16orf72
C12orf4
ZNF552
WBP1L
WAPL
SELENOH
GEMIN6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NFATC2IP
SPC25
INSR
FOS
SATB1
SAP30BP
RECQL5
KDSR
IER3
FLOT1
CSNK1G3
CCR2
CRB1
ZC3H6
SPTLC3
NCDN
KIF16B
KIAA0319L
EIF4A1
CDK8
ZNF749
ZNF584
TIMM22
RPL29
PTMA
PHF23
LRRC14B
DVL2
WBP2
RANGAP1
PRPF18
MAMSTR
FOXP2
ZNF419
SLC33A1
PRPF19
NR1H2
CCDC77
TBCK
STAP2
SART1
MPND
DPEP3
AIMP1
PSMD1
MED6
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
ERVMER34-1
EPYC
COPZ1
CGGBP1
CCL3L3
CCL3L1
C3orf38
ATXN2L
ZNF451
TYK2
RBM28
ZNF609
TLR5
IFI44L
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
MYCBP2
MPV17L2
EPRS1
CSTF1
AURKA
GABARAP
DHX16
CLEC7A
NPIPB5
NDUFA2
MTR
IK
CHD6
SLMAP
FBXW9
BIN2
ZSWIM1
UNC93B1
RAB40B
NDUFAB1
HIRIP3
HAX1
ECT2
CRYBB1
TAF6
SLC9A1
OXCT2
MAPKAPK2
KLHL20
IDH3B
CNPY4
ASB4
ASAP1
PLCD3
DMAP1
ATG9B
ARNTL
ACBD4
ABCB8
TDRKH
PPIL3
NIF3L1
MTBP
MRPL13
IER5L
ASXL1
SMARCA4
RPS12
IFIT1
TPCN1
TAOK3
SUDS3
RPL21
NMNAT1
MGP
LZIC
TSC1
SH3RF2
PSAP
MYEOV
MTFR2
GFI1B
CEP128
AMOTL2
UBQLN1
TOMM40
MACIR
UQCRC2
TUT1
SCAMP4
MYNN
EMX1
CLPTM1L
ADAT3
ACTRT3
ZNRF3
ZNF668
ZNF646
SH3GL1
SACS
P2RY10
OCSTAMP
DAPK3
CWC22
CHAF1A
TMED10
TCF3
NXNL2
NSMCE3
GFM2
FAM207A
CSTB
TFB2M
GCG
CYP2R1
CNST
CCDC61
RFC4
PTBP1
KRI1