ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466113 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◣ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
FRG2C
WDR74
ADAMTSL1
CABCOCO1
TNFRSF19
DUX4
MTRNR2L1
SP2
CDCA3
EVI5L
UNK
H3-3B
CCDC200
SLC8A1
DNM2
COL23A1
CLPB
FAP
H4C3
H1-6
VPS50
HEPACAM2
NAV3
ID3
H4C11
DDX49
COPE
IFRD2
FEM1A
KATNB1
BOD1
RFX1
PHF12
NEBL
H4C14
FRG2
IRF2BP2
EHF
H4C15
RBBP5
SUCLG1
FBXL19
ARID5B
OR4M1
THRAP3
TMEM115
ID1
RAB5B
AP2S1
ING4
H4C2
H3C2
SP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TEPSIN
NDUFAF8
TCEA2
PPP1R12B
RWDD1
RAG2
IFTAP
MAPKAPK5
GALM
CHMP4B
POLR3F
DZANK1
TBL1X
WDPCP
MDH1
YJU2
PES1
PEX14
DFFA
PAFAH2
OR4Q3
KHSRP
SCNM1
LYSMD1
PRCC
SLX1B
SLX1A
BOLA2B
BOLA2
CALR3
C19orf44
SLC39A1
CRTC2
MMACHC
PAK1IP1
C6orf52
TSN
NUDCD1
MRPL11
CIC
TSC2
NTHL1
SF3B6
FAM228B
MTOR
TMEM70
ELOC
GSPT1
ZNF547
TRAPPC2B
CCAR2
C8orf58
PHB
SUPV3L1
H2BC4
H2AC6
NUP205
SLC25A25
NAIF1
NCLN
TSNAXIP1
RANBP10
SMPD3
POLDIP3
DDX23
C1orf159
ANKHD1-EIF4EBP3
ANKHD1
SP5
AURKAIP1
RPL32
RNASEH2A
PRDX2
TRIP10
GPR108
TXNRD1
C16orf91
ZFYVE1
ST3GAL2
MEIS1
UBQLN4
LAMTOR2
SNX17
EIF2B4
BOLA2-SMG1P6
TRDMT1
RPS20
NFIB
MUC3A
BMF
SART3
ISCU
MRPL24
VIPAS39
AHSA1
BANP
TSSC4
GSK3A
LRCH4
FBXO24
TOM1L2
DRC3
LRRC29
ORMDL3
ZNF17
SYMPK
FOXA3
ZNF608
VCPIP1
C8orf44-SGK3
SPAAR
BUB1B
HRCT1
GPR137
NUP107
CYCS
INVS
ERP44
KBTBD6
LSG1
SIRT4
GTF2H4
HNRNPC
G3BP1
TBL1XR1
EXOC3L1
E2F4
OSBP
STAM
EMCN
UFSP2
C4orf47
METTL3
NPRL2
CYB561D2
SEC11C
H4C12
SNX16
ZNF225
NLK
CCDC146
NR6A1
KHDC4
SIRT2
NFKBIB
EIF2AK3
PNKD
AAMP
TMEM11
PPRC1
PRR14
ZNF548
ZNF691
PEMT
RPS7
TMEM107
LARS1
RPS3
NFKBIL1
ATP6V1G2
DDX39B
SRD5A1
NSUN2
ZNF383
TMTC3
CEP290
SUFU
ACTR1A
CNIH4
SUPT7L
SLC4A1AP
CDK5RAP2
MICOS13
HSD11B1L
CLN3
APOBR
TRMO
TRAF7
TULP2
NUCB1
MRPL53
DSTYK
MTRNR2L2
MSH3
DHFR
COMMD9
TM4SF18
RPIA
ISY1-RAB43
ISY1
EXOC4
ZNF268
CACTIN
UBR2
SPSB3
NUBP2
TIMM21
FBXO15
STT3A
LMAN2
C19orf67
MCAT
PIN4
ARID2
NUF2
ATP5F1B
SCAF1
RRAS
ZNF56
RTRAF
RTF2
ZC3H10
RPL41
NDUFS3
KBTBD4
OAZ3
WDR46
PFDN6
BAHCC1
UBE2I
TFPT
PRPF31
SLX4IP
MKKS
PEAK1
HMG20A
DDX41
AK2
CCDC90B
COMMD1
CCT4
COX16
TTC33
TGIF1
EXD2
MTRNR2L8
GATB
INTS9
HMBOX1
SSR3
UBC
TRAPPC6B
PNN
ING3
FLAD1
ZNF417
ZNF576
IRGQ
FAM187A
EFTUD2
CCDC103
ZSWIM3
ACOT8
NDUFC2-KCTD14
NDUFC2
VTI1B
NVL
RIIAD1
MAP2K3
IRF2BPL
CELF3
VWA5A
TARS2
KRT23
H3C15
H3C14
H2AC19
H2AC18
ZNF143
FASTKD1
HNRNPL
UFD1
CDC45
MED27
PHB2
ZNF337
BTRC
TMEM94
NME1
CCDC124
SLC35B1
FAM168A
GTF3C3
SEL1L
ZNF500
ZNF776
LAMP1
TMEM160
HEXIM2
DHX33
AP1G1
RPL27
ZNF384
ZMAT2
RBL1
ID2
RARB
DCP1B
KRT15
NDUFB3
FAM126B
SLC25A19
TTI2
TCERG1
PXMP2
POLE
NUDT13
PSMB6
TMEM60
PHTF2
SPHK2
RPL18
FAM83E
GDE1
CCP110
PSMD11
TSNAX
RPS13
SNX1
CIAO2A
RANBP2
FARSB
ANAPC5
COX7C
TRIP4
JOSD2
ASPDH
C19orf53
PSENEN
LIN37
RPS27A
CLHC1
RABAC1
ZSCAN5A
SCRIB
RNF121
LOC100133315
GBA
BUB3
MRPL28
TMEM79
SMG5
MARS1
ARHGAP9
ZNF444
EMILIN1
TBC1D10B
MYLPF
SEC13
DLGAP1
H4C5
H2BC7
TMEM242
METTL26
USP17L22
USP17L20
GABPB2
RPS23
ATP6AP1L
TBL3
WDR83OS
WDR83
MAN2B1
FDPS
SLC35E2B
NDC80
METTL4
PRORP
PPP2R3C
TM9SF4
TRIM55
MRPL44
C12orf43
ZNF565
ZNF146
TMEM143
SYNGR4
FAM156B
FAM156A
ZNF687
ZNF335
SRSF11
LRRC40
EIF3F
RPS6KB2
ZNF552
GEMIN6
DYNC1I2
EXOSC5
BCKDHA
NFATC2IP
SPC25
FOS
GOSR2
SAP30BP
RECQL5
HDAC9
SUGP1
MAU2
PNPLA6
PIGL
NCOR1
REXO1
ZC3H6
NCDN
KIAA0319L
EIF4A1
CDK8
UBAC1
IPO13
CTU1
ZNF584
RPL29
PHF23
DVL2
STIP1
TPRKB
WBP2
RANGAP1
MAMSTR
FOXP2
MRPL30
MITD1
HSPA9
ZNF419
PRRG2
NOSIP
PANK4
HES5
ATG4C
SART1
ZNF165
MED6
CCDC174
CGGBP1
C3orf38
ATXN2L
PEX2
STK36
RNF25
SMAD3
TMEM109
IFI44L
ZNF235
CAND1
GET3
SREK1IP1
CWC27
PEX26
MPV17L2
CSTF1
AURKA
AHCYL2
GABARAP
ZSCAN22
MRPS7
GGA3
RAB11B
ZBTB45
CD2BP2
PCBP1
CDCA8
C1orf109
NDUFA2
IK
C19orf48
SLMAP
FBXW9
FBXW11
NDUFAB1
HIRIP3
SEC61B
CTDP1
RPL18A
ZNF688
PNISR
TAF6
IDH3B
CNPY4
ASB4
PSPN
ALKBH7
ATG9B
ABCB8
DHX8
NR1H3
ACP2
PPIL3
NIF3L1
IER5L
USP30
RPS12
SMG8
RPL9
LIAS
BMERB1
RPL21
NMNAT1
LZIC
HEXB
SH3RF2
MYEOV
CEP128
AMOTL2
SSBP1
SF3B3
COG4
UTP11
UBQLN1
NDUFAF5
ESF1
ZNRF3
SACS
CWC22
TMED10
NXNL2
GFM2
PRICKLE3
SESN1
CEP57L1
GORAB
GCG
CENPA
RFC4
PTBP1
KRI1
CDKN2D
ZBTB12
KMT2B
EHMT2
DPH2
DEXI
CLEC16A
C2
ATP6V0B
KRR1
NMT1
DCAKD
VPS25
SLC39A9
ERH
SPNS1
NGDN
ZFPL1
TMEM262
CDCA5
COPS7A
HBP1
PTCD3
POLR1A
C10orf143
UTP3
PPP1R12C
NOLC1
C12orf73
RPS26
NUP214
GTF2IRD1
XPNPEP3
ST13
ZNF112
TPGS1
PRKCI
HMGA2
BCAS2
RNF187
CRADD
USP17L21
USP17L18
USP17L12
USP17L11
PTPN6
C12orf57
SPAG7
RBM6
N4BP2L2
GTPBP3
B4GALT5
ANO8
NTMT1
C9orf50
DARS2
CENPL
EMC4
LTA4H
SLC4A2
RPA2
CREM
CDK5
TACO1
ZNF76
TIMM13
NOP53
CHD8
PPP6R1
UQCRH
LRRC41
CXXC1
RPGRIP1L
FTO
MT2A
RNF5
AGPAT1
SNRPB
WASF1
HEXIM1
CDC40
MRPS23
CNOT1
BABAM1
GPKOW
CSTF2T
EIF2S3
GSTO2
ZRANB2
RHBDD3
NRL
MED11
GPATCH1
EWSR1
DCAF11
SMARCAL1
TLE3
PPP1R9B
PARP2
EIF1AD
BANF1
ZNF221
OXSR1
H2BC21
H2AC21
H2AC20
RBM39
MRPL1
ZNF2
SNRPE
SERP1
EIF2A
PPWD1
NRDE2
MRM3
GLOD4
GID4
CENPK
ATPAF2
CAPN15
THYN1
ACAD8
GRWD1
TTC31
CWF19L1
CCDC33
CCDC142
PITX3
GBF1
ADO
ZMAT5
UQCR10
RACGAP1
PHF5A
ACO2
BAG6
APOM
POLG2
ICE1
STAM2
MED20
BYSL
PABPN1
WDR97
MAF1
PAN2
IL23A
VPS52
RPS18
B3GALT4
TXNL4B
DHX38
ZDHHC5
TMEM63C
PAF1
MED29
RPF1
SLC25A42
MOCS3
DPM1
MPDU1
LOC100996842
CD68
SF3A3
RGPD2
RGPD1
MTRNR2L9
FRMPD4
TNFRSF12A
THOC6
HCFC1R1
MAMDC2
ZBTB38
INTS1
PSMC5
FTSJ3
VEZT
FGD6
MRPL21
IGHMBP2
PWWP2A
NPAS4
MTRNR2L10
NDUFS7
EMILIN2
TATDN3
NSL1
PCM1
NEDD8-MDP1
NEDD8
GMPR2
H4C8
ATP6V1G1
NOC4L
DDX51
POLR2E
RHOT2
CCNL1
SMARCD2
HNRNPUL1
SLC25A20
PHF19
FNDC3A
SSBP2
PPP5D1
GUF1
CALM3
ZNF773
NOP16
HIGD2A
ARHGEF1
ZNF140
ZFYVE19
OPRL1
LKAAEAR1
DNAJC17
ATP5MG
AP2M1
TOP2A
MTRF1
EPS15
IARS2
BPNT1
RCAN1
PDE6D
COPS7B
ZNF211
RPL37
DYNC2I2
CCL3
SYT7
ZCCHC4
RPAIN
NUP88
TBP
SSBP3
PSMB1
ZNF286A
INO80C
FCF1
AREL1
STK25
ABT1
H4C4
CSDE1
DMAC1
ZNF628
BRWD1
USP48
ZCCHC8
RPL35A
IQCG
GLIPR1L1
CAPS2
TRAPPC9
SHPK
PTEN
KLLN
CTNS
ZC3H12A
NDUFB5
MRPL47
TOR1AIP2
TOR1AIP1
INTS10
UBE2J1
HEMK1
C3orf18
RPL14
MYOM2
XAB2
PCP2
PMF1-BGLAP
PMF1
VRK1
ARHGAP17
TJP3
SIX1
PNKP
COMMD2
ARHGEF2
ENPP4
CLIC5
KLHL29
TOMM40L
PEX3
DENND1B
CA11
APOA2
ALKBH3
ADAT2
KCTD5
KLF2
PROSER3
HSPB6
PTDSS2
ATP2C1
STX16
KLF6
FUT10
TIMMDC1
TEKT2
ADPRS
TRAPPC3
HEXA
MRPS18C
HELQ
RAP2B
C1orf198
NGB
GCLC
LNPEP
MDM2
ABCF2-H2BE1
ABCF2
SCT
CDHR5
ACTL6A
RUFY3
COX7A2L
CXCR5
CCL5
CCDC39
TMEM256
NLGN2
MDM4
SMCO1
ZPBP2
IKZF3
NCOA7
MNT
KAT6B
ILF2
NUP153
RBM25
NAT16
HCAR3
CHST12
KDM6B
SNX15
ANP32C
KMT2C
EML2
DPP9
ZNF226
LTN1
POLG
FGG
CRYAA2
CRYAA
RGS8
MACC1
SKA2
PRR11
PHC2
KANSL3
FER1L5
TJP1
MRPL20
UBE2H
DRAP1
C11orf68
LOC102723996
ICOSLG
USP3
COPS8
CCM2
LAS1L
HSD11B1
CDYL
CDC20
PSMD4
OR6B2
NDUFA10
MED23
LIME1
WHAMM
RABL2A
FSD2
TRIM48
STMN3
RTEL1
FMO4
CWC25
TP63
RBM42
BBX
UBB
FOXK1
FAAP24
CEP89
LEFTY2
EXOSC6
CMSS1
HOOK1
AQR
RAD51AP2
C2orf42
TPST1
SECISBP2
RAD51AP1
METTL25
CCDC59
C16orf72
C12orf4
WBP1L
WAPL
SELENOH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
INSR